RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 DRICH1Q6PGQ1 229 aaPredicted RBP18.27■□□□□ 0.52
SNX17-210ENST00000537606 SLC35B2Q8TB61 432 aa18.27■□□□□ 0.52
SNX17-210ENST00000537606 TMEM88BA6NKF7 163 aa18.27■□□□□ 0.51
SNX17-210ENST00000537606 RASGRF2O14827 1237 aa18.27■□□□□ 0.51
SNX17-210ENST00000537606 CD52P31358 61 aa18.27■□□□□ 0.51
SNX17-210ENST00000537606 SDC4P31431 198 aa18.27■□□□□ 0.51
SNX17-210ENST00000537606 BST2Q10589 180 aaKnown RBP18.27■□□□□ 0.51
SNX17-210ENST00000537606 AUHQ13825 339 aaKnown RBP18.27■□□□□ 0.51
SNX17-210ENST00000537606 BBS12Q6ZW61 710 aa18.27■□□□□ 0.51
SNX17-210ENST00000537606 PGM2Q96G03 612 aa18.27■□□□□ 0.51
SNX17-210ENST00000537606 C9orf72Q96LT7 481 aa18.27■□□□□ 0.51
SNX17-210ENST00000537606 PAAF1Q9BRP4 392 aa18.27■□□□□ 0.51
SNX17-210ENST00000537606 ADAM33Q9BZ11 813 aa18.27■□□□□ 0.51
SNX17-210ENST00000537606 MAGEB5Q9BZ81 275 aa18.27■□□□□ 0.51
SNX17-210ENST00000537606 UPF3AQ9H1J1 476 aaKnown RBP18.27■□□□□ 0.51
SNX17-210ENST00000537606 TSPYL2Q9H2G4 693 aaPredicted RBP18.27■□□□□ 0.51
SNX17-210ENST00000537606 DRG1Q9Y295 367 aaKnown RBP18.27■□□□□ 0.51
SNX17-210ENST00000537606 GHRP10912 638 aa18.26■□□□□ 0.51
SNX17-210ENST00000537606 CLCNKBP51801 687 aa18.26■□□□□ 0.51
SNX17-210ENST00000537606 HIBCHQ6NVY1 386 aaPredicted RBP18.26■□□□□ 0.51
SNX17-210ENST00000537606 B3GALNT2Q8NCR0 500 aa18.26■□□□□ 0.51
SNX17-210ENST00000537606 NKD2Q969F2 451 aaPredicted RBP18.26■□□□□ 0.51
SNX17-210ENST00000537606 FAM129AQ9BZQ8 928 aa18.26■□□□□ 0.51
SNX17-210ENST00000537606 CTNNAL1Q9UBT7 734 aa18.26■□□□□ 0.51
SNX17-210ENST00000537606 BEST1O76090 585 aa18.25■□□□□ 0.51
SNX17-210ENST00000537606 MAP3K6O95382 1288 aa18.25■□□□□ 0.51
SNX17-210ENST00000537606 ITGAVP06756 1048 aa18.25■□□□□ 0.51
SNX17-210ENST00000537606 SETSIPP0DME0 302 aa18.25■□□□□ 0.51
SNX17-210ENST00000537606 SCNN1GP51170 649 aa18.25■□□□□ 0.51
SNX17-210ENST00000537606 BCAT1P54687 386 aa18.25■□□□□ 0.51
SNX17-210ENST00000537606 TAZQ16635 292 aa18.25■□□□□ 0.51
SNX17-210ENST00000537606 CA9Q16790 459 aa18.25■□□□□ 0.51
SNX17-210ENST00000537606 TRMT10CQ7L0Y3 403 aaKnown RBP18.25■□□□□ 0.51
SNX17-210ENST00000537606 MAK16Q9BXY0 300 aaKnown RBP18.25■□□□□ 0.51
SNX17-210ENST00000537606 FAM169AQ9Y6X4 670 aa18.25■□□□□ 0.51
SNX17-210ENST00000537606 CASTOR2A6NHX0 329 aa18.25■□□□□ 0.51
SNX17-210ENST00000537606 GOLGA8MH3BSY2 632 aa18.25■□□□□ 0.51
SNX17-210ENST00000537606 CAV1Q03135 178 aa18.25■□□□□ 0.51
SNX17-210ENST00000537606 QPCTQ16769 361 aa18.25■□□□□ 0.51
SNX17-210ENST00000537606 C6orf118Q5T5N4 469 aa18.25■□□□□ 0.51
SNX17-210ENST00000537606 KIAA0319Q5VV43 1072 aa18.25■□□□□ 0.51
SNX17-210ENST00000537606 AGMOQ6ZNB7 445 aa18.25■□□□□ 0.51
SNX17-210ENST00000537606 ZC3H18Q86VM9 953 aaKnown RBP18.25■□□□□ 0.51
SNX17-210ENST00000537606 UNC45BQ8IWX7 931 aa18.25■□□□□ 0.51
SNX17-210ENST00000537606 LRRN4Q8WUT4 740 aa18.25■□□□□ 0.51
SNX17-210ENST00000537606 TRMT13Q9NUP7 481 aaKnown RBP18.25■□□□□ 0.51
SNX17-210ENST00000537606 PADI3Q9ULW8 664 aa18.25■□□□□ 0.51
SNX17-210ENST00000537606 DCAF8L1A6NGE4 600 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 ARL5CA6NH57 179 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 DNALI1O14645 258 aaPredicted RBP18.24■□□□□ 0.51
SNX17-210ENST00000537606 TRAPPC3O43617 180 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 MGEA5O60502 916 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 TTC4O95801 387 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 THP07101 528 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 CHN1P15882 459 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 LRPAP1P30533 357 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 HDAC4P56524 1084 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 MGAT3Q09327 533 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 DPYSL3Q14195 570 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 KRT81Q14533 505 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 C1orf228Q6PIY5 440 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 LIMS2Q7Z4I7 341 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 FUKQ8N0W3 1084 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 C3orf58Q8NDZ4 430 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 NINJ2Q9NZG7 142 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 EFR3BQ9Y2G0 817 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 GMNCA6NCL1 334 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 FAM107AO95990 144 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 CREB1P16220 341 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 EIF3EP60228 445 aaKnown RBP18.24■□□□□ 0.51
SNX17-210ENST00000537606 MTM1Q13496 603 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 PAN2Q504Q3 1202 aaKnown RBP18.24■□□□□ 0.51
SNX17-210ENST00000537606 PIGZQ86VD9 579 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 BBOF1Q8ND07 529 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 SPATA18Q8TC71 538 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 STK32AQ8WU08 396 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 TNIP3Q96KP6 325 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 SENP8Q96LD8 212 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 RBM15Q96T37 977 aaKnown RBP eCLIP18.24■□□□□ 0.51
SNX17-210ENST00000537606 RSAD1Q9HA92 442 aa18.24■□□□□ 0.51
SNX17-210ENST00000537606 GPBP1L1Q9HC44 474 aaPredicted RBP18.24■□□□□ 0.51
SNX17-210ENST00000537606 I3L4J1 428 aa18.23■□□□□ 0.51
SNX17-210ENST00000537606 GAD2Q05329 585 aa18.23■□□□□ 0.51
SNX17-210ENST00000537606 SF3A3Q12874 501 aaKnown RBP eCLIP18.23■□□□□ 0.511e-6■■■■□ 21.8
SNX17-210ENST00000537606 PPP6R3Q5H9R7 873 aaPredicted RBP18.23■□□□□ 0.51
SNX17-210ENST00000537606 TOP6BLQ8N6T0 577 aa18.23■□□□□ 0.51
SNX17-210ENST00000537606 FAM71DQ8N9W8 422 aa18.23■□□□□ 0.51
SNX17-210ENST00000537606 RSAD2Q8WXG1 361 aa18.23■□□□□ 0.51
SNX17-210ENST00000537606 SNRNP25Q9BV90 132 aaKnown RBP18.23■□□□□ 0.51
SNX17-210ENST00000537606 TPX2Q9ULW0 747 aaKnown RBP18.23■□□□□ 0.51
SNX17-210ENST00000537606 APOC4-APOC2K7ER74 178 aa18.23■□□□□ 0.51
SNX17-210ENST00000537606 POMCP01189 267 aa18.23■□□□□ 0.51
SNX17-210ENST00000537606 APOC2P02655 101 aa18.23■□□□□ 0.51
SNX17-210ENST00000537606 PTPN1P18031 435 aaKnown RBP18.23■□□□□ 0.51
SNX17-210ENST00000537606 WARSP23381 471 aaKnown RBP18.23■□□□□ 0.51
SNX17-210ENST00000537606 IL4RP24394 825 aa18.23■□□□□ 0.51
SNX17-210ENST00000537606 MMP13P45452 471 aa18.23■□□□□ 0.51
SNX17-210ENST00000537606 NDUFV1P49821 464 aa18.23■□□□□ 0.51
SNX17-210ENST00000537606 SP3Q02447 781 aa18.23■□□□□ 0.51
SNX17-210ENST00000537606 MDH1BQ5I0G3 518 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms