RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 MIS12Q9H081 205 aa25.51■■□□□ 1.67
HMGA2-208ENST00000537429 FBXO44Q9H4M3 255 aa25.51■■□□□ 1.67
HMGA2-208ENST00000537429 SFXN1Q9H9B4 322 aa25.51■■□□□ 1.67
HMGA2-208ENST00000537429 CLDND1Q9NY35 253 aa25.51■■□□□ 1.67
HMGA2-208ENST00000537429 EHD2Q9NZN4 543 aa25.51■■□□□ 1.67
HMGA2-208ENST00000537429 CCDC195A0A1B0GUA6 201 aa25.5■■□□□ 1.67
HMGA2-208ENST00000537429 CALB1P05937 261 aa25.5■■□□□ 1.67
HMGA2-208ENST00000537429 IFRD2Q12894 506 aaPredicted RBP25.5■■□□□ 1.67
HMGA2-208ENST00000537429 CYP4A22Q5TCH4 519 aa25.5■■□□□ 1.67
HMGA2-208ENST00000537429 XYLT1Q86Y38 959 aa25.5■■□□□ 1.67
HMGA2-208ENST00000537429 CMASQ8NFW8 434 aaPredicted RBP25.5■■□□□ 1.67
HMGA2-208ENST00000537429 PPM1EQ8WY54 764 aa25.5■■□□□ 1.67
HMGA2-208ENST00000537429 ZNF707Q96C28 371 aaPredicted RBP25.5■■□□□ 1.67
HMGA2-208ENST00000537429 TRMT2BQ96GJ1 504 aaKnown RBP25.5■■□□□ 1.67
HMGA2-208ENST00000537429 ZNF512Q96ME7 567 aaPredicted RBP25.5■■□□□ 1.67
HMGA2-208ENST00000537429 MAGED2Q9UNF1 606 aaPredicted RBP25.5■■□□□ 1.67
HMGA2-208ENST00000537429 EYSQ5T1H1 3165 aa25.5■■□□□ 1.67
HMGA2-208ENST00000537429 ZBED1O96006 694 aa25.49■■□□□ 1.67
HMGA2-208ENST00000537429 USP17L7P0C7H9 530 aa25.49■■□□□ 1.67
HMGA2-208ENST00000537429 YWHAQP27348 245 aa25.49■■□□□ 1.67
HMGA2-208ENST00000537429 GALCP54803 685 aa25.49■■□□□ 1.67
HMGA2-208ENST00000537429 GSCP56915 257 aaPredicted RBP25.49■■□□□ 1.67
HMGA2-208ENST00000537429 ZNF268Q14587 947 aaPredicted RBP25.49■■□□□ 1.67
HMGA2-208ENST00000537429 ANKRD54Q6NXT1 300 aa25.49■■□□□ 1.67
HMGA2-208ENST00000537429 ZDHHC17Q8IUH5 632 aa25.49■■□□□ 1.67
HMGA2-208ENST00000537429 C12orf76Q8N812 135 aaPredicted RBP25.49■■□□□ 1.67
HMGA2-208ENST00000537429 STRIP2Q9ULQ0 834 aa25.49■■□□□ 1.67
HMGA2-208ENST00000537429 SCML2Q9UQR0 700 aa25.49■■□□□ 1.67
HMGA2-208ENST00000537429 REXO2Q9Y3B8 237 aaKnown RBP25.49■■□□□ 1.67
HMGA2-208ENST00000537429 NCANO14594 1321 aa25.49■■□□□ 1.67
HMGA2-208ENST00000537429 ZNF638Q14966 1978 aaKnown RBP25.49■■□□□ 1.67
HMGA2-208ENST00000537429 ANKRD62A6NC57 917 aa25.48■■□□□ 1.67
HMGA2-208ENST00000537429 FBXO21O94952 628 aa25.48■■□□□ 1.67
HMGA2-208ENST00000537429 IPO7O95373 1038 aaKnown RBP25.48■■□□□ 1.67
HMGA2-208ENST00000537429 MAGEA1P43355 309 aa25.48■■□□□ 1.67
HMGA2-208ENST00000537429 DAOAP59103 153 aa25.48■■□□□ 1.67
HMGA2-208ENST00000537429 MRPS5P82675 430 aaKnown RBP25.48■■□□□ 1.67
HMGA2-208ENST00000537429 SKIV2LQ15477 1246 aaKnown RBP25.48■■□□□ 1.67
HMGA2-208ENST00000537429 TOGARAM2Q6ZUX3 1019 aa25.48■■□□□ 1.67
HMGA2-208ENST00000537429 FAM183BPQ6ZVS7 135 aa25.48■■□□□ 1.67
HMGA2-208ENST00000537429 BHLHA9Q7RTU4 235 aa25.48■■□□□ 1.67
HMGA2-208ENST00000537429 ACRBPQ8NEB7 543 aa25.48■■□□□ 1.67
HMGA2-208ENST00000537429 CLEC4CQ8WTT0 213 aa25.48■■□□□ 1.67
HMGA2-208ENST00000537429 MCRS1Q96EZ8 462 aa25.48■■□□□ 1.67
HMGA2-208ENST00000537429 PACSIN1Q9BY11 444 aa25.48■■□□□ 1.67
HMGA2-208ENST00000537429 LRRC3Q9BY71 257 aa25.48■■□□□ 1.67
HMGA2-208ENST00000537429 CLEC1BQ9P126 229 aa25.48■■□□□ 1.67
HMGA2-208ENST00000537429 WDR35Q9P2L0 1181 aa25.48■■□□□ 1.67
HMGA2-208ENST00000537429 PCDHA13Q9Y5I0 950 aa25.48■■□□□ 1.67
HMGA2-208ENST00000537429 XYLBO75191 536 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 H2AFZP0C0S5 128 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 ABCB4P21439 1286 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 OR6B2Q6IFH4 312 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 SYCE2Q6PIF2 218 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 OLFML1Q6UWY5 402 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 H2AFVQ71UI9 128 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 FEZF2Q8TBJ5 459 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 NDRG1Q92597 394 aaKnown RBP25.47■■□□□ 1.67
HMGA2-208ENST00000537429 PABPC5Q96DU9 382 aaKnown RBP25.47■■□□□ 1.67
HMGA2-208ENST00000537429 TRIM11Q96F44 468 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 THAP2Q9H0W7 228 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 TBX10O75333 385 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 MYBL1P10243 752 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 HOXB8P17481 243 aaPredicted RBP25.47■■□□□ 1.67
HMGA2-208ENST00000537429 RRM1P23921 792 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 KRT83P78385 493 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 DLX2Q07687 328 aaPredicted RBP25.47■■□□□ 1.67
HMGA2-208ENST00000537429 TAF10Q12962 218 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 TMC5Q6UXY8 1006 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 TMC8Q8IU68 726 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 IRGQQ8WZA9 623 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 FBXO32Q969P5 355 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 PIWIL1Q96J94 861 aaKnown RBP25.47■■□□□ 1.67
HMGA2-208ENST00000537429 DESI2Q9BSY9 194 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 APOL5Q9BWW9 433 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 PIDD1Q9HB75 910 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 ZNF334Q9HCZ1 680 aaPredicted RBP25.47■■□□□ 1.67
HMGA2-208ENST00000537429 DNMT3BQ9UBC3 853 aaKnown RBP25.47■■□□□ 1.67
HMGA2-208ENST00000537429 UXTQ9UBK9 157 aaPredicted RBP25.47■■□□□ 1.67
HMGA2-208ENST00000537429 INTUQ9ULD6 942 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 ADGRG1Q9Y653 693 aa25.47■■□□□ 1.67
HMGA2-208ENST00000537429 TCRBV5S1A1TA0A578 114 aa25.46■■□□□ 1.67
HMGA2-208ENST00000537429 PTPN2P17706 415 aa25.46■■□□□ 1.67
HMGA2-208ENST00000537429 LTBRP36941 435 aa25.46■■□□□ 1.67
HMGA2-208ENST00000537429 SLC6A3Q01959 620 aa25.46■■□□□ 1.67
HMGA2-208ENST00000537429 RARS2Q5T160 578 aaKnown RBP25.46■■□□□ 1.67
HMGA2-208ENST00000537429 PHLDB2Q86SQ0 1253 aa25.46■■□□□ 1.67
HMGA2-208ENST00000537429 HS6ST3Q8IZP7 471 aa25.46■■□□□ 1.67
HMGA2-208ENST00000537429 C3orf20Q8ND61 904 aa25.46■■□□□ 1.67
HMGA2-208ENST00000537429 ZNF653Q96CK0 615 aa25.46■■□□□ 1.67
HMGA2-208ENST00000537429 SLITRK1Q96PX8 696 aa25.46■■□□□ 1.67
HMGA2-208ENST00000537429 IL21Q9HBE4 155 aa25.46■■□□□ 1.67
HMGA2-208ENST00000537429 LUC7LQ9NQ29 371 aaKnown RBP25.46■■□□□ 1.67
HMGA2-208ENST00000537429 HCFC1R1Q9NWW0 138 aa25.46■■□□□ 1.67
HMGA2-208ENST00000537429 CNOT8Q9UFF9 292 aaKnown RBP25.46■■□□□ 1.67
HMGA2-208ENST00000537429 YJEFN3A6XGL0 299 aa25.45■■□□□ 1.66
HMGA2-208ENST00000537429 E7ENQ6 273 aa25.45■■□□□ 1.66
HMGA2-208ENST00000537429 SART1O43290 800 aaKnown RBP25.45■■□□□ 1.66
HMGA2-208ENST00000537429 TMEM253P0C7T8 217 aa25.45■■□□□ 1.66
HMGA2-208ENST00000537429 SCNN1AP37088 669 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms