RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 FBXO36Q8NEA4 188 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 PNPT1Q8TCS8 783 aaKnown RBP5.59□□□□□ -1.51
PTPRD-213ENST00000537002 UCMAQ8WVF2 138 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 TRIM63Q969Q1 353 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 C7orf26Q96N11 449 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 GCNAQ96QF7 691 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 RIOK1Q9BRS2 568 aaKnown RBP5.59□□□□□ -1.51
PTPRD-213ENST00000537002 PIM2Q9P1W9 311 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 ZC3H7BQ9UGR2 993 aaKnown RBP5.59□□□□□ -1.51
PTPRD-213ENST00000537002 GGA1Q9UJY5 639 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 SAC3D1A6NKF1 404 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 RGS21Q2M5E4 152 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 PDZD4Q76G19 769 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-213ENST00000537002 RMND5BQ96G75 393 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-213ENST00000537002 TMEM79Q9BSE2 394 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 PICK1Q9NRD5 415 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 GNPTGQ9UJJ9 305 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 CAB39Q9Y376 341 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-213ENST00000537002 CHD4Q14839 1912 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 SLC22A2O15244 555 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 SLC16A4O15374 487 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 XPOTO43592 962 aaKnown RBP5.59□□□□□ -1.51
PTPRD-213ENST00000537002 KRT6AP02538 564 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 KRT6BP04259 564 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 C8BP07358 591 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 PMLP29590 882 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 CCT8P50990 548 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 NCKAP1LP55160 1127 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 GSTM4Q03013 218 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 TTC39BQ5VTQ0 682 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-213ENST00000537002 RSBN1Q5VWQ0 802 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-213ENST00000537002 DHX38Q92620 1227 aaKnown RBP5.59□□□□□ -1.51
PTPRD-213ENST00000537002 OXCT2Q9BYC2 517 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-213ENST00000537002 ARHGEF38Q9NXL2 777 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 MYPNQ86TC9 1320 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 PNMA6FA0A0J9YX94 578 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 TLR2O60603 784 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 PYGMP11217 842 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 FMO5P49326 533 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 CDK9P50750 372 aaKnown RBP5.59□□□□□ -1.51
PTPRD-213ENST00000537002 NLRP11P59045 1033 aaKnown RBP5.59□□□□□ -1.51
PTPRD-213ENST00000537002 PTP4A2Q12974 167 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 USP41Q3LFD5 358 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 EPC2Q52LR7 807 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 CDAN1Q8IWY9 1227 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 DEFB107AQ8IZN7 70 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 SYNE4Q8N205 404 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 ZCCHC9Q8N567 271 aaKnown RBP5.59□□□□□ -1.51
PTPRD-213ENST00000537002 FAM172AQ8WUF8 416 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 GAB3Q8WWW8 586 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 PRICKLE1Q96MT3 831 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-213ENST00000537002 POP1Q99575 1024 aaKnown RBP5.59□□□□□ -1.51
PTPRD-213ENST00000537002 IL1RL2Q9HB29 575 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 RRN3Q9NYV6 651 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 SEL1LQ9UBV2 794 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 RBMX2Q9Y388 322 aaKnown RBP5.59□□□□□ -1.51
PTPRD-213ENST00000537002 A0A087WXM4 84 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.59□□□□□ -1.51
PTPRD-213ENST00000537002 C16orf96A6NNT2 1141 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 H0Y626 953 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 AP3B1O00203 1094 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 USP1O94782 785 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 ADRA1DP25100 572 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 FDFT1P37268 417 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 ITGADQ13349 1161 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 ATAD3BQ5T9A4 648 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 DEFB132Q7Z7B7 95 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 NOP9Q86U38 636 aaKnown RBP5.59□□□□□ -1.51
PTPRD-213ENST00000537002 NLRX1Q86UT6 975 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 PDSS2Q86YH6 399 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 RTKN2Q8IZC4 609 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 NDUFAF2Q8N183 169 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 POU5F2Q8N7G0 328 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 C4orf32Q8N8J7 132 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 XXYLT1Q8NBI6 393 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 SLC44A5Q8NCS7 719 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 ERLEC1Q96DZ1 483 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 ADPGKQ9BRR6 497 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 SEMA6AQ9H2E6 1030 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 PIDD1Q9HB75 910 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 SLC9A2Q9UBY0 812 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 DNAJC16Q9Y2G8 782 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.59□□□□□ -1.52
PTPRD-213ENST00000537002 CFAP99D6REC4 459 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 RPS6KA4O75676 772 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 ARL4AP40617 200 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 SNRPFP62306 86 aaKnown RBP5.59□□□□□ -1.52
PTPRD-213ENST00000537002 PPATQ06203 517 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 PTK2BQ14289 1009 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 ARHGEF6Q15052 776 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 MAPRE2Q15555 327 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 CCDC85BQ15834 202 aaPredicted RBP5.59□□□□□ -1.52
PTPRD-213ENST00000537002 MFSD14BQ5SR56 506 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 MROH9Q5TGP6 573 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 TMEM53Q6P2H8 277 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 BNC2Q6ZN30 1099 aaPredicted RBP5.59□□□□□ -1.52
PTPRD-213ENST00000537002 CCDC81Q6ZN84 652 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 ZBTB46Q86UZ6 589 aa5.59□□□□□ -1.52
PTPRD-213ENST00000537002 CDR2LQ86X02 465 aaPredicted RBP5.59□□□□□ -1.52
PTPRD-213ENST00000537002 ATP6V1E2Q96A05 226 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms