RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 CCDC142Q17RM4 750 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 GLRA4Q5JXX5 417 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 BZW1Q7L1Q6 419 aaKnown RBP14.18□□□□□ -0.14
SMG6-203ENST00000536871 STRADAQ7RTN6 431 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 ADGRF2Q8IZF7 708 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 KBTBD7Q8WVZ9 684 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 TMEM40Q8WWA1 233 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 PRCCQ92733 491 aaPredicted RBP14.18□□□□□ -0.14
SMG6-203ENST00000536871 ARHGEF2Q92974 986 aaKnown RBP14.18□□□□□ -0.14
SMG6-203ENST00000536871 CHMP6Q96FZ7 201 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 HNRNPABQ99729 332 aaKnown RBP14.18□□□□□ -0.14
SMG6-203ENST00000536871 SELENOSQ9BQE4 189 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 TACO1Q9BSH4 297 aaKnown RBP14.18□□□□□ -0.14
SMG6-203ENST00000536871 APOL6Q9BWW8 343 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 SAYSD1Q9NPB0 183 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 PPANQ9NQ55 473 aaKnown RBP14.18□□□□□ -0.14
SMG6-203ENST00000536871 RCOR3Q9P2K3 495 aaPredicted RBP14.18□□□□□ -0.14
SMG6-203ENST00000536871 SLC24A2Q9UI40 661 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 HES2Q9Y543 173 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 APOL1O14791 398 aa14.17□□□□□ -0.14
SMG6-203ENST00000536871 GPR182O15218 404 aa14.17□□□□□ -0.14
SMG6-203ENST00000536871 PAPSS1O43252 624 aaPredicted RBP14.17□□□□□ -0.14
SMG6-203ENST00000536871 CA12O43570 354 aa14.17□□□□□ -0.14
SMG6-203ENST00000536871 C6orf222P0C671 652 aaPredicted RBP14.17□□□□□ -0.14
SMG6-203ENST00000536871 CHN1P15882 459 aa14.17□□□□□ -0.14
SMG6-203ENST00000536871 PECAM1P16284 738 aaPredicted RBP14.17□□□□□ -0.14
SMG6-203ENST00000536871 NR2C2P49116 596 aa14.17□□□□□ -0.14
SMG6-203ENST00000536871 RAB27AP51159 221 aa14.17□□□□□ -0.14
SMG6-203ENST00000536871 LILRA4P59901 499 aa14.17□□□□□ -0.14
SMG6-203ENST00000536871 BEX3Q00994 111 aa14.17□□□□□ -0.14
SMG6-203ENST00000536871 SKIDA1Q1XH10 827 aa14.17□□□□□ -0.14
SMG6-203ENST00000536871 CCDC91Q7Z6B0 441 aa14.17□□□□□ -0.14
SMG6-203ENST00000536871 TADA2BQ86TJ2 420 aa14.17□□□□□ -0.14
SMG6-203ENST00000536871 PDIK1LQ8N165 341 aa14.17□□□□□ -0.14
SMG6-203ENST00000536871 SMG8Q8ND04 991 aaKnown RBP14.17□□□□□ -0.14
SMG6-203ENST00000536871 FAM172AQ8WUF8 416 aa14.17□□□□□ -0.14
SMG6-203ENST00000536871 KCTD13Q8WZ19 329 aa14.17□□□□□ -0.14
SMG6-203ENST00000536871 CENPIQ92674 756 aaPredicted RBP14.17□□□□□ -0.14
SMG6-203ENST00000536871 ACSF2Q96CM8 615 aaPredicted RBP14.17□□□□□ -0.14
SMG6-203ENST00000536871 FAF2Q96CS3 445 aa14.17□□□□□ -0.14
SMG6-203ENST00000536871 FAM118BQ9BPY3 351 aa14.17□□□□□ -0.14
SMG6-203ENST00000536871 FAM49BQ9NUQ9 324 aa14.17□□□□□ -0.14
SMG6-203ENST00000536871 PAK5Q9P286 719 aa14.17□□□□□ -0.14
SMG6-203ENST00000536871 MGAMO43451 1857 aa14.17□□□□□ -0.14
SMG6-203ENST00000536871 SMIM23A6NLE4 172 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 DCDC2CA8MYV0 355 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 E7ESA3 106 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 PPEF2O14830 753 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 KIF1CO43896 1103 aaKnown RBP14.16□□□□□ -0.14
SMG6-203ENST00000536871 SPAG6O75602 509 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 CYBAP13498 195 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 RPL9P32969 192 aaKnown RBP14.16□□□□□ -0.14
SMG6-203ENST00000536871 TM4SF4P48230 202 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 LHX1P48742 406 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 CTCFP49711 727 aaPredicted RBP14.16□□□□□ -0.14
SMG6-203ENST00000536871 RGS7P49802 495 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 SLC18A1P54219 525 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 DYNLT1P63172 113 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 XRCC4Q13426 336 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 HIC1Q14526 733 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 LONRF1Q17RB8 773 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 GNASQ5JWF2 1037 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 GKAP1Q5VSY0 366 aaPredicted RBP14.16□□□□□ -0.14
SMG6-203ENST00000536871 SLC9A4Q6AI14 798 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 FAM228AQ86W67 206 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 ATP11CQ8NB49 1132 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 RTP4Q96DX8 246 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 PPP1R10Q96QC0 940 aaKnown RBP14.16□□□□□ -0.14
SMG6-203ENST00000536871 NGRNQ9NPE2 291 aaKnown RBP14.16□□□□□ -0.14
SMG6-203ENST00000536871 GIT1Q9Y2X7 761 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 TRPM7Q96QT4 1865 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 EXOC1LA0A1B0GW35 172 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 BCLAF3A2AJT9 711 aaKnown RBP14.16□□□□□ -0.14
SMG6-203ENST00000536871 SLCO1A2P46721 670 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 IFI35P80217 286 aaPredicted RBP14.16□□□□□ -0.14
SMG6-203ENST00000536871 DPYSL2Q16555 572 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 DARS2Q6PI48 645 aaKnown RBP14.16□□□□□ -0.14
SMG6-203ENST00000536871 ARHGEF18Q6ZSZ5 1173 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 CYP4V2Q6ZWL3 525 aaPredicted RBP14.16□□□□□ -0.14
SMG6-203ENST00000536871 CPLX4Q7Z7G2 160 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 EXOC3L1Q86VI1 746 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 CDKL3Q8IVW4 592 aaPredicted RBP14.16□□□□□ -0.14
SMG6-203ENST00000536871 NAT8LQ8N9F0 302 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 B3GALNT2Q8NCR0 500 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 HHIPL1Q96JK4 782 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 PEBP4Q96S96 227 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 C11orf84Q9BUA3 381 aaPredicted RBP14.16□□□□□ -0.14
SMG6-203ENST00000536871 DUSP16Q9BY84 665 aa14.16□□□□□ -0.14
SMG6-203ENST00000536871 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.16□□□□□ -0.14
SMG6-203ENST00000536871 ARHGEF37A1IGU5 675 aa14.15□□□□□ -0.14
SMG6-203ENST00000536871 CHADO15335 359 aa14.15□□□□□ -0.14
SMG6-203ENST00000536871 FBXO21O94952 628 aa14.15□□□□□ -0.14
SMG6-203ENST00000536871 RARBP10826 455 aa14.15□□□□□ -0.14
SMG6-203ENST00000536871 SKIP12755 728 aa14.15□□□□□ -0.14
SMG6-203ENST00000536871 AIF1P55008 147 aa14.15□□□□□ -0.14
SMG6-203ENST00000536871 BCAR1P56945 870 aa14.15□□□□□ -0.14
SMG6-203ENST00000536871 CORO7P57737 925 aa14.15□□□□□ -0.14
SMG6-203ENST00000536871 C15orf59Q2T9L4 293 aaPredicted RBP14.15□□□□□ -0.14
SMG6-203ENST00000536871 KLHL38Q2WGJ6 581 aa14.15□□□□□ -0.14
SMG6-203ENST00000536871 ANKRD20A8PQ5CZ79 823 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms