RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 H3BUI4 141 aa6.68□□□□□ -1.34
CLIP1-207ENST00000536634 PRAMEF10O60809 474 aa6.68□□□□□ -1.34
CLIP1-207ENST00000536634 RFPL1O75677 317 aa6.68□□□□□ -1.34
CLIP1-207ENST00000536634 TYRP1P17643 537 aa6.68□□□□□ -1.34
CLIP1-207ENST00000536634 PLA2G5P39877 138 aa6.68□□□□□ -1.34
CLIP1-207ENST00000536634 MPLP40238 635 aa6.68□□□□□ -1.34
CLIP1-207ENST00000536634 BLOC1S1P78537 153 aa6.68□□□□□ -1.34
CLIP1-207ENST00000536634 KIF22Q14807 665 aa6.68□□□□□ -1.34
CLIP1-207ENST00000536634 CD300EQ496F6 205 aaPredicted RBP6.68□□□□□ -1.34
CLIP1-207ENST00000536634 EPM2AIP1Q7L775 607 aaPredicted RBP6.68□□□□□ -1.34
CLIP1-207ENST00000536634 TMPRSS9Q7Z410 1059 aa6.68□□□□□ -1.34
CLIP1-207ENST00000536634 CLNKQ7Z7G1 428 aa6.68□□□□□ -1.34
CLIP1-207ENST00000536634 COLGALT2Q8IYK4 626 aa6.68□□□□□ -1.34
CLIP1-207ENST00000536634 PLBD2Q8NHP8 589 aa6.68□□□□□ -1.34
CLIP1-207ENST00000536634 AIFM3Q96NN9 605 aa6.68□□□□□ -1.34
CLIP1-207ENST00000536634 TRIB1Q96RU8 372 aa6.68□□□□□ -1.34
CLIP1-207ENST00000536634 GPR35Q9HC97 309 aa6.68□□□□□ -1.34
CLIP1-207ENST00000536634 CASS4Q9NQ75 786 aa6.68□□□□□ -1.34
CLIP1-207ENST00000536634 STXBP5LQ9Y2K9 1186 aa6.68□□□□□ -1.34
CLIP1-207ENST00000536634 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.68□□□□□ -1.34
CLIP1-207ENST00000536634 MAST3O60307 1309 aa6.68□□□□□ -1.34
CLIP1-207ENST00000536634 AKAP11Q9UKA4 1901 aa6.68□□□□□ -1.34
CLIP1-207ENST00000536634 RHOBTB3O94955 611 aa6.67□□□□□ -1.34
CLIP1-207ENST00000536634 S100BP04271 92 aaPredicted RBP6.67□□□□□ -1.34
CLIP1-207ENST00000536634 RARBP10826 455 aa6.67□□□□□ -1.34
CLIP1-207ENST00000536634 ADRA1BP35368 520 aa6.67□□□□□ -1.34
CLIP1-207ENST00000536634 ANXA11P50995 505 aaKnown RBP6.67□□□□□ -1.34
CLIP1-207ENST00000536634 POU6F2P78424 691 aaPredicted RBP6.67□□□□□ -1.34
CLIP1-207ENST00000536634 CRY2Q49AN0 593 aa6.67□□□□□ -1.34
CLIP1-207ENST00000536634 CCDC157Q569K6 752 aa6.67□□□□□ -1.34
CLIP1-207ENST00000536634 SP5Q6BEB4 398 aaPredicted RBP6.67□□□□□ -1.34
CLIP1-207ENST00000536634 SLC30A10Q6XR72 485 aa6.67□□□□□ -1.34
CLIP1-207ENST00000536634 MORC1Q86VD1 984 aa6.67□□□□□ -1.34
CLIP1-207ENST00000536634 ADGRG5Q8IZF4 528 aa6.67□□□□□ -1.34
CLIP1-207ENST00000536634 CELF5Q8N6W0 485 aaKnown RBP6.67□□□□□ -1.34
CLIP1-207ENST00000536634 IL17REQ8NFR9 667 aa6.67□□□□□ -1.34
CLIP1-207ENST00000536634 PPP1R35Q8TAP8 253 aa6.67□□□□□ -1.34
CLIP1-207ENST00000536634 C1GALT1C1Q96EU7 318 aa6.67□□□□□ -1.34
CLIP1-207ENST00000536634 SLC35A4Q96G79 324 aa6.67□□□□□ -1.34
CLIP1-207ENST00000536634 FAM167AQ96KS9 214 aa6.67□□□□□ -1.34
CLIP1-207ENST00000536634 TAAR9Q96RI9 348 aa6.67□□□□□ -1.34
CLIP1-207ENST00000536634 PANK3Q9H999 370 aa6.67□□□□□ -1.34
CLIP1-207ENST00000536634 ADARB2Q9NS39 739 aaKnown RBP6.67□□□□□ -1.34
CLIP1-207ENST00000536634 ETAA1Q9NY74 926 aa6.67□□□□□ -1.34
CLIP1-207ENST00000536634 NOB1Q9ULX3 412 aaKnown RBP6.67□□□□□ -1.34
CLIP1-207ENST00000536634 NIP7Q9Y221 180 aaKnown RBP eCLIP6.67□□□□□ -1.34
CLIP1-207ENST00000536634 USP16Q9Y5T5 823 aa6.67□□□□□ -1.34
CLIP1-207ENST00000536634 POLR2AP24928 1970 aaKnown RBP6.67□□□□□ -1.34
CLIP1-207ENST00000536634 SPTBN5Q9NRC6 3674 aaKnown RBP6.66□□□□□ -1.34
CLIP1-207ENST00000536634 TOR1BO14657 336 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 PRPF3O43395 683 aaKnown RBP6.66□□□□□ -1.34
CLIP1-207ENST00000536634 SUV39H1O43463 412 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 ESRRBO95718 433 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 SCGB1D2O95969 90 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 MYBP10242 640 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 GATA3P23771 443 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 ALDH1B1P30837 517 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 GMPSP49915 693 aaPredicted RBP6.66□□□□□ -1.34
CLIP1-207ENST00000536634 HUNKP57058 714 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 RPS7P62081 194 aaKnown RBP6.66□□□□□ -1.34
CLIP1-207ENST00000536634 FPGSQ05932 587 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 EXOSC9Q06265 439 aaKnown RBP6.66□□□□□ -1.34
CLIP1-207ENST00000536634 PIGFQ07326 219 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 MPP3Q13368 585 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 DYRK1AQ13627 763 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 HABP2Q14520 560 aaPredicted RBP6.66□□□□□ -1.34
CLIP1-207ENST00000536634 SF3B3Q15393 1217 aaKnown RBP6.66□□□□□ -1.34
CLIP1-207ENST00000536634 HLFQ16534 295 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 CLEC4GQ6UXB4 293 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 Q6ZNX1 250 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 LNX2Q8N448 690 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 KLHDC4Q8TBB5 520 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 CDK5RAP3Q96JB5 506 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 SMOQ99835 787 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 AIFM2Q9BRQ8 373 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 LRFN3Q9BTN0 628 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 TEX13AQ9BXU3 409 aaPredicted RBP6.66□□□□□ -1.34
CLIP1-207ENST00000536634 TINAGL1Q9GZM7 467 aaPredicted RBP6.66□□□□□ -1.34
CLIP1-207ENST00000536634 ARMT1Q9H993 441 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 RNF186Q9NXI6 227 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 KCTD5Q9NXV2 234 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 PGAP2Q9UHJ9 254 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 ZDHHC8Q9ULC8 765 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 KIAA0100Q14667 2235 aaKnown RBP6.66□□□□□ -1.34
CLIP1-207ENST00000536634 NPC1L1Q9UHC9 1359 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 RIC1Q4ADV7 1423 aa6.66□□□□□ -1.34
CLIP1-207ENST00000536634 NUP98P52948 1817 aa6.65□□□□□ -1.34
CLIP1-207ENST00000536634 TCERG1O14776 1098 aaKnown RBP6.65□□□□□ -1.34
CLIP1-207ENST00000536634 PPIP5K2O43314 1243 aa6.65□□□□□ -1.34
CLIP1-207ENST00000536634 VPS4BO75351 444 aa6.65□□□□□ -1.34
CLIP1-207ENST00000536634 KIF20AO95235 890 aa6.65□□□□□ -1.34
CLIP1-207ENST00000536634 LMNAP02545 664 aaKnown RBP6.65□□□□□ -1.34
CLIP1-207ENST00000536634 PURAQ00577 322 aaKnown RBP6.65□□□□□ -1.34
CLIP1-207ENST00000536634 CXCL9Q07325 125 aa6.65□□□□□ -1.34
CLIP1-207ENST00000536634 NFE2Q16621 373 aaPredicted RBP6.65□□□□□ -1.34
CLIP1-207ENST00000536634 OLFML1Q6UWY5 402 aa6.65□□□□□ -1.34
CLIP1-207ENST00000536634 CTU1Q7Z7A3 348 aaKnown RBP6.65□□□□□ -1.34
CLIP1-207ENST00000536634 CAMKK1Q8N5S9 505 aa6.65□□□□□ -1.34
CLIP1-207ENST00000536634 SLC35G2Q8TBE7 412 aa6.65□□□□□ -1.34
CLIP1-207ENST00000536634 POC1BQ8TC44 478 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms