RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 CFHR1Q03591 330 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 SMARCB1Q12824 385 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 BYSLQ13895 437 aaKnown RBP5.59□□□□□ -1.51
CHD4-205ENST00000536301 ZRSR1Q15695 479 aaKnown RBP5.59□□□□□ -1.51
CHD4-205ENST00000536301 SMAD1Q15797 465 aaKnown RBP5.59□□□□□ -1.51
CHD4-205ENST00000536301 NFE2Q16621 373 aaPredicted RBP5.59□□□□□ -1.51
CHD4-205ENST00000536301 HLA-BQ31612 363 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 HSF5Q4G112 596 aaPredicted RBP5.59□□□□□ -1.51
CHD4-205ENST00000536301 ARSHQ5FYA8 562 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 KCNT1Q5JUK3 1230 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 C10orf76Q5T2E6 689 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 KIAA1324Q6UXG2 1013 aaKnown RBP5.59□□□□□ -1.51
CHD4-205ENST00000536301 CRELD2Q6UXH1 353 aaPredicted RBP5.59□□□□□ -1.51
CHD4-205ENST00000536301 DBX2Q6ZNG2 339 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 TMEM25Q86YD3 366 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 PDCD7Q8N8D1 485 aaKnown RBP5.59□□□□□ -1.51
CHD4-205ENST00000536301 IGSF22Q8N9C0 903 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 TERB1Q8NA31 727 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 CCDC26Q8TAB7 109 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 CXorf38Q8TB03 319 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 RHBDD1Q8TEB9 315 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 DNASE2BQ8WZ79 361 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 GTF3C6Q969F1 213 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 MYLPFQ96A32 169 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 TOE1Q96GM8 510 aaKnown RBP5.59□□□□□ -1.51
CHD4-205ENST00000536301 MRGPRX1Q96LB2 322 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 FIZ1Q96SL8 496 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 MSTO1Q9BUK6 570 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 GPR174Q9BXC1 333 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 MIR1-1HGQ9H1L0 117 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 CRTAC1Q9NQ79 661 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 DNM3Q9UQ16 869 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 STK24Q9Y6E0 443 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 PLXNA2O75051 1894 aa5.59□□□□□ -1.51
CHD4-205ENST00000536301 KIF26BQ2KJY2 2108 aa5.59□□□□□ -1.52
CHD4-205ENST00000536301 NBASA2RRP1 2371 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 A0A1B0GTW7 788 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 MEI4A8MW99 385 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 K7ENM7 598 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 HNRNPDLO14979 420 aaKnown RBP5.58□□□□□ -1.52
CHD4-205ENST00000536301 HOXC11O43248 304 aaPredicted RBP5.58□□□□□ -1.52
CHD4-205ENST00000536301 NDUFS2O75306 463 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 ABL1P00519 1130 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 ITGB3P05106 788 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 IRF1P10914 325 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 MBL2P11226 248 aaPredicted RBP5.58□□□□□ -1.52
CHD4-205ENST00000536301 NCAM1P13591 858 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 PLCG1P19174 1290 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 LMO2P25791 158 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 MATKP42679 507 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 CSNK1EP49674 416 aaKnown RBP5.58□□□□□ -1.52
CHD4-205ENST00000536301 PGFP49763 221 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 SRSF1Q07955 248 aaKnown RBP eCLIP5.58□□□□□ -1.52
CHD4-205ENST00000536301 IFRD2Q12894 506 aaPredicted RBP5.58□□□□□ -1.52
CHD4-205ENST00000536301 TAF10Q12962 218 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 KIF19Q2TAC6 998 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 SV2CQ496J9 727 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 CFAP221Q4G0U5 840 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 DCAF12L1Q5VU92 463 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 FAM171BQ6P995 826 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 RABEPKQ7Z6M1 372 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 CACUL1Q86Y37 369 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 SPATA2LQ8IUW3 424 aaPredicted RBP5.58□□□□□ -1.52
CHD4-205ENST00000536301 FMNL3Q8IVF7 1028 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 BBS7Q8IWZ6 715 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 C1orf127Q8N9H9 656 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 SYT2Q8N9I0 419 aaPredicted RBP5.58□□□□□ -1.52
CHD4-205ENST00000536301 C1orf216Q8TAB5 229 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 KBTBD7Q8WVZ9 684 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 WASF1Q92558 559 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 ACBD6Q9BR61 282 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 TTLL2Q9BWV7 592 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 MKRN2Q9H000 416 aaKnown RBP5.58□□□□□ -1.52
CHD4-205ENST00000536301 FAM124BQ9H5Z6 455 aaPredicted RBP5.58□□□□□ -1.52
CHD4-205ENST00000536301 C17orf75Q9HAS0 396 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 ABCB6Q9NP58 842 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 WSB2Q9NYS7 404 aaPredicted RBP5.58□□□□□ -1.52
CHD4-205ENST00000536301 TRPM5Q9NZQ8 1165 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 DAXXQ9UER7 740 aaPredicted RBP5.58□□□□□ -1.52
CHD4-205ENST00000536301 EIF2B4Q9UI10 523 aaKnown RBP5.58□□□□□ -1.52
CHD4-205ENST00000536301 SIX4Q9UIU6 781 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 AGAP1Q9UPQ3 857 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 PCDHB6Q9Y5E3 794 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 SNX11Q9Y5W9 270 aa5.58□□□□□ -1.52
CHD4-205ENST00000536301 SPTAN1Q13813 2472 aaKnown RBP5.58□□□□□ -1.52
CHD4-205ENST00000536301 TDRD6O60522 2096 aaKnown RBP5.57□□□□□ -1.52
CHD4-205ENST00000536301 F8VP50 259 aa5.57□□□□□ -1.52
CHD4-205ENST00000536301 H0Y8X5 98 aa5.57□□□□□ -1.52
CHD4-205ENST00000536301 TULP1O00294 542 aaPredicted RBP5.57□□□□□ -1.52
CHD4-205ENST00000536301 CLDN5O00501 218 aa5.57□□□□□ -1.52
CHD4-205ENST00000536301 GABRDO14764 452 aa5.57□□□□□ -1.52
CHD4-205ENST00000536301 BCAT2O15382 392 aaPredicted RBP5.57□□□□□ -1.52
CHD4-205ENST00000536301 FLRT2O43155 660 aa5.57□□□□□ -1.52
CHD4-205ENST00000536301 COCHO43405 550 aa5.57□□□□□ -1.52
CHD4-205ENST00000536301 TRAK2O60296 914 aa5.57□□□□□ -1.52
CHD4-205ENST00000536301 ZNF217O75362 1048 aa5.57□□□□□ -1.52
CHD4-205ENST00000536301 ADH1CP00326 375 aa5.57□□□□□ -1.52
CHD4-205ENST00000536301 PLA2G4BP0C869 781 aa5.57□□□□□ -1.52
CHD4-205ENST00000536301 ZNF883P0CG24 379 aa5.57□□□□□ -1.52
CHD4-205ENST00000536301 HLA-EP13747 358 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms