RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 FLT3P36888 993 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 SSR1P43307 286 aaKnown RBP24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 SLC5A3P53794 718 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 DAOAP59103 153 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 TAF5Q15542 800 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 MGAT5BQ3V5L5 792 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 TPGS2Q68CL5 300 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 ZNF461Q8TAF7 563 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 IRGQQ8WZA9 623 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 KHSRPQ92945 711 aaKnown RBP eCLIP24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 CD101Q93033 1021 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 SEPT5Q99719 369 aaPredicted RBP24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 CNPY3Q9BT09 278 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 UBE2OQ9C0C9 1292 aaKnown RBP24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 AFF4Q9UHB7 1163 aaKnown RBP24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 CES2O00748 559 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 DPYSL4O14531 572 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 USP17L7P0C7H9 530 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 HAPLN1P10915 354 aaPredicted RBP24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 CA8P35219 290 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 RPL10AP62906 217 aaKnown RBP24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 YWHAZP63104 245 aaKnown RBP24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 WHAMMP3Q1A5X7 153 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 GOLGA1Q92805 767 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 PBKQ96KB5 322 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 PCDHA3Q9Y5H8 950 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 TNFRSF10BO14763 440 aa24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 DDX3YO15523 660 aaKnown RBP24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 PSTPIP1O43586 416 aa24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 SRGAP2O75044 1071 aa24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 DAB1O75553 588 aa24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 VNN2O95498 520 aa24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 CXCR5P32302 372 aa24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 TUFMP49411 452 aaKnown RBP24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 DUSP4Q13115 394 aa24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 DDR2Q16832 855 aa24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 PM20D1Q6GTS8 502 aa24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 CC2D1AQ6P1N0 951 aaPredicted RBP24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 CPNE8Q86YQ8 564 aa24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 RHOT1Q8IXI2 618 aa24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 NUP93Q8N1F7 819 aa24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 TTC9BQ8N6N2 239 aa24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 AUTS2Q8WXX7 1259 aa24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 POPDC2Q9HBU9 364 aa24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 HSFX1Q9UBD0 423 aa24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 SLC27A5Q9Y2P5 690 aa24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 USP3Q9Y6I4 520 aa24.02■■□□□ 1.44
RBFOX1-206ENST00000535565 GRXCR1A8MXD5 290 aa24.01■■□□□ 1.43
RBFOX1-206ENST00000535565 ABLIM3O94929 683 aa24.01■■□□□ 1.43
RBFOX1-206ENST00000535565 RAB33AQ14088 237 aa24.01■■□□□ 1.43
RBFOX1-206ENST00000535565 TMC7Q7Z402 723 aa24.01■■□□□ 1.43
RBFOX1-206ENST00000535565 NDRG1Q92597 394 aaKnown RBP24.01■■□□□ 1.43
RBFOX1-206ENST00000535565 SPATA17Q96L03 361 aa24.01■■□□□ 1.43
RBFOX1-206ENST00000535565 SAMD11Q96NU1 681 aa24.01■■□□□ 1.43
RBFOX1-206ENST00000535565 NCAPGQ9BPX3 1015 aa24.01■■□□□ 1.43
RBFOX1-206ENST00000535565 TRIM62Q9BVG3 475 aa24.01■■□□□ 1.43
RBFOX1-206ENST00000535565 FBXO44Q9H4M3 255 aa24.01■■□□□ 1.43
RBFOX1-206ENST00000535565 PCDHA11Q9Y5I1 949 aa24.01■■□□□ 1.43
RBFOX1-206ENST00000535565 PLXNA3P51805 1871 aa24.01■■□□□ 1.43
RBFOX1-206ENST00000535565 GREB1Q4ZG55 1949 aa24■■□□□ 1.43
RBFOX1-206ENST00000535565 C5orf67F2Z3F1 127 aa24■■□□□ 1.43
RBFOX1-206ENST00000535565 RB1P06400 928 aa24■■□□□ 1.43
RBFOX1-206ENST00000535565 MYOGP15173 224 aa24■■□□□ 1.43
RBFOX1-206ENST00000535565 ATF2P15336 505 aa24■■□□□ 1.43
RBFOX1-206ENST00000535565 MATKP42679 507 aa24■■□□□ 1.43
RBFOX1-206ENST00000535565 PTPN9P43378 593 aa24■■□□□ 1.43
RBFOX1-206ENST00000535565 UBE3AQ05086 875 aa24■■□□□ 1.43
RBFOX1-206ENST00000535565 CCDC181Q5TID7 509 aa24■■□□□ 1.43
RBFOX1-206ENST00000535565 TRNP1Q6NT89 227 aa24■■□□□ 1.43
RBFOX1-206ENST00000535565 SCAMP5Q8TAC9 235 aa24■■□□□ 1.43
RBFOX1-206ENST00000535565 KRT35Q92764 455 aa24■■□□□ 1.43
RBFOX1-206ENST00000535565 CAPZA3Q96KX2 299 aa24■■□□□ 1.43
RBFOX1-206ENST00000535565 CEP295NLQ96MC4 621 aa24■■□□□ 1.43
RBFOX1-206ENST00000535565 CFAP57Q96MR6 1250 aa24■■□□□ 1.43
RBFOX1-206ENST00000535565 C17orf80Q9BSJ5 609 aa24■■□□□ 1.43
RBFOX1-206ENST00000535565 C11orf84Q9BUA3 381 aaPredicted RBP24■■□□□ 1.43
RBFOX1-206ENST00000535565 CARD9Q9H257 536 aa24■■□□□ 1.43
RBFOX1-206ENST00000535565 RXFP1Q9HBX9 757 aa24■■□□□ 1.43
RBFOX1-206ENST00000535565 RNF14Q9UBS8 474 aa24■■□□□ 1.43
RBFOX1-206ENST00000535565 YJEFN3A6XGL0 299 aa23.99■■□□□ 1.43
RBFOX1-206ENST00000535565 E7ENQ6 273 aa23.99■■□□□ 1.43
RBFOX1-206ENST00000535565 CAPN9O14815 690 aa23.99■■□□□ 1.43
RBFOX1-206ENST00000535565 ZNF185O15231 689 aa23.99■■□□□ 1.43
RBFOX1-206ENST00000535565 LILRB3O75022 631 aa23.99■■□□□ 1.43
RBFOX1-206ENST00000535565 RTN3O95197 1032 aaPredicted RBP23.99■■□□□ 1.43
RBFOX1-206ENST00000535565 LTFP02788 710 aa23.99■■□□□ 1.43
RBFOX1-206ENST00000535565 CA3P07451 260 aa23.99■■□□□ 1.43
RBFOX1-206ENST00000535565 GPR15P49685 360 aa23.99■■□□□ 1.43
RBFOX1-206ENST00000535565 RWDD2BP57060 319 aa23.99■■□□□ 1.43
RBFOX1-206ENST00000535565 CKAP4Q07065 602 aaKnown RBP23.99■■□□□ 1.43
RBFOX1-206ENST00000535565 IFRD2Q12894 506 aaPredicted RBP23.99■■□□□ 1.43
RBFOX1-206ENST00000535565 HADHQ16836 314 aaKnown RBP23.99■■□□□ 1.43
RBFOX1-206ENST00000535565 CCDC14Q49A88 953 aa23.99■■□□□ 1.43
RBFOX1-206ENST00000535565 DAB2IPQ5VWQ8 1189 aa23.99■■□□□ 1.43
RBFOX1-206ENST00000535565 FAM109BQ6ICB4 259 aaPredicted RBP23.99■■□□□ 1.43
RBFOX1-206ENST00000535565 COG1Q8WTW3 980 aa23.99■■□□□ 1.43
RBFOX1-206ENST00000535565 DDX23Q9BUQ8 820 aaKnown RBP23.99■■□□□ 1.43
RBFOX1-206ENST00000535565 CRISPLD1Q9H336 500 aa23.99■■□□□ 1.43
RBFOX1-206ENST00000535565 ALG13Q9NP73 1137 aaKnown RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms