RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 GALK1P51570 392 aa12.56□□□□□ -0.4
KNTC1-208ENST00000535410 MAP3K7CLP57077 242 aa12.56□□□□□ -0.4
KNTC1-208ENST00000535410 EML3Q32P44 896 aa12.56□□□□□ -0.4
KNTC1-208ENST00000535410 DCAF17Q5H9S7 520 aaPredicted RBP12.56□□□□□ -0.4
KNTC1-208ENST00000535410 FOXR2Q6PJQ5 311 aa12.56□□□□□ -0.4
KNTC1-208ENST00000535410 TSSK4Q6SA08 328 aa12.56□□□□□ -0.4
KNTC1-208ENST00000535410 NUDT18Q6ZVK8 323 aa12.56□□□□□ -0.4
KNTC1-208ENST00000535410 PAQR9Q6ZVX9 377 aa12.56□□□□□ -0.4
KNTC1-208ENST00000535410 FILIP1Q7Z7B0 1213 aa12.56□□□□□ -0.4
KNTC1-208ENST00000535410 LONP2Q86WA8 852 aa12.56□□□□□ -0.4
KNTC1-208ENST00000535410 ADGRG2Q8IZP9 1017 aa12.56□□□□□ -0.4
KNTC1-208ENST00000535410 ACDQ96AP0 544 aa12.56□□□□□ -0.4
KNTC1-208ENST00000535410 CDK5RAP1Q96SZ6 601 aaKnown RBP12.56□□□□□ -0.4
KNTC1-208ENST00000535410 RNF38Q9H0F5 515 aa12.56□□□□□ -0.4
KNTC1-208ENST00000535410 RBM12Q9NTZ6 932 aaKnown RBP12.56□□□□□ -0.4
KNTC1-208ENST00000535410 FAM49BQ9NUQ9 324 aa12.56□□□□□ -0.4
KNTC1-208ENST00000535410 GMEB2Q9UKD1 530 aa12.56□□□□□ -0.4
KNTC1-208ENST00000535410 SH3BP1Q9Y3L3 701 aa12.56□□□□□ -0.4
KNTC1-208ENST00000535410 NUP210Q8TEM1 1887 aaPredicted RBP12.56□□□□□ -0.4
KNTC1-208ENST00000535410 GVINP1Q7Z2Y8 2422 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 CCDC163A0A0D9SF12 145 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.55□□□□□ -0.4
KNTC1-208ENST00000535410 CHURC1-FNTBB4DL54 471 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 GNA14O95837 355 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 CCDC130P13994 396 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 CD58P19256 250 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 SDHBP21912 280 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 TBXAS1P24557 533 aaPredicted RBP12.55□□□□□ -0.4
KNTC1-208ENST00000535410 ADORA2BP29275 332 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 CACNA2D1P54289 1103 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 SATB1Q01826 763 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 BTBD8Q5XKL5 378 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 FSTL4Q6MZW2 842 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 ZC3H3Q8IXZ2 948 aaKnown RBP12.55□□□□□ -0.4
KNTC1-208ENST00000535410 CAMKK1Q8N5S9 505 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 C12orf29Q8N999 325 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 SUMF1Q8NBK3 374 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 SCAMP5Q8TAC9 235 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 EEF2KMTQ96G04 330 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 SMOQ99835 787 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 DUSP9Q99956 384 aaKnown RBP12.55□□□□□ -0.4
KNTC1-208ENST00000535410 DUSP16Q9BY84 665 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 UBXN6Q9BZV1 441 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 APOBEC3GQ9HC16 384 aaKnown RBP12.55□□□□□ -0.4
KNTC1-208ENST00000535410 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.55□□□□□ -0.4
KNTC1-208ENST00000535410 CISHQ9NSE2 258 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 SMPD4Q9NXE4 827 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 CFAP97Q9P2B7 532 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 KIAA1257Q9ULG3 409 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 SCML2Q9UQR0 700 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 COQ4Q9Y3A0 265 aa12.55□□□□□ -0.4
KNTC1-208ENST00000535410 OTOL1A6NHN0 477 aaPredicted RBP12.54□□□□□ -0.4
KNTC1-208ENST00000535410 PMM2O15305 246 aa12.54□□□□□ -0.4
KNTC1-208ENST00000535410 COCHO43405 550 aa12.54□□□□□ -0.4
KNTC1-208ENST00000535410 ZDHHC11BP0C7U3 371 aa12.54□□□□□ -0.4
KNTC1-208ENST00000535410 RALAP11233 206 aa12.54□□□□□ -0.4
KNTC1-208ENST00000535410 TDGF1P13385 188 aa12.54□□□□□ -0.4
KNTC1-208ENST00000535410 ACO1P21399 889 aaKnown RBP12.54□□□□□ -0.4
KNTC1-208ENST00000535410 ATP5C1P36542 298 aaKnown RBP12.54□□□□□ -0.4
KNTC1-208ENST00000535410 EIF2DP41214 584 aaKnown RBP12.54□□□□□ -0.4
KNTC1-208ENST00000535410 GAS6Q14393 721 aa12.54□□□□□ -0.4
KNTC1-208ENST00000535410 CCDC40Q4G0X9 1142 aa12.54□□□□□ -0.4
KNTC1-208ENST00000535410 LAIR1Q6GTX8 287 aa12.54□□□□□ -0.4
KNTC1-208ENST00000535410 Q6ZS52 159 aa12.54□□□□□ -0.4
KNTC1-208ENST00000535410 ARHGAP18Q8N392 663 aa12.54□□□□□ -0.4
KNTC1-208ENST00000535410 TMEM176AQ96HP8 235 aa12.54□□□□□ -0.4
KNTC1-208ENST00000535410 LINC00597Q9H2U6 94 aa12.54□□□□□ -0.4
KNTC1-208ENST00000535410 TMEM30AQ9NV96 361 aa12.54□□□□□ -0.4
KNTC1-208ENST00000535410 GMIPQ9P107 970 aa12.54□□□□□ -0.4
KNTC1-208ENST00000535410 LSM7Q9UK45 103 aaKnown RBP12.54□□□□□ -0.4
KNTC1-208ENST00000535410 MAN1B1Q9UKM7 699 aa12.54□□□□□ -0.4
KNTC1-208ENST00000535410 SMG5Q9UPR3 1016 aaKnown RBP12.54□□□□□ -0.4
KNTC1-208ENST00000535410 TICRRQ7Z2Z1 1910 aa12.54□□□□□ -0.4
KNTC1-208ENST00000535410 P4HA2O15460 535 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 FOXD2O60548 495 aaPredicted RBP12.53□□□□□ -0.4
KNTC1-208ENST00000535410 TLR5O60602 858 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 EGFP01133 1207 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 UBE2HP62256 183 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 GAD2Q05329 585 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 ORC1Q13415 861 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 SIM2Q14190 667 aaPredicted RBP12.53□□□□□ -0.4
KNTC1-208ENST00000535410 DHCR24Q15392 516 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 HSF5Q4G112 596 aaPredicted RBP12.53□□□□□ -0.4
KNTC1-208ENST00000535410 ZNF394Q53GI3 561 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 KLHDC10Q6PID8 442 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 CLEC20AQ6ZU45 233 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 CEP68Q76N32 757 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 WDR5BQ86VZ2 330 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 ZNF276Q8N554 614 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 TRIML1Q8N9V2 468 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 ZMIZ2Q8NF64 920 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 RIN3Q8TB24 985 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 SEMA4DQ92854 862 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 ELMO3Q96BJ8 720 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 CYLDQ9NQC7 956 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 CHMP5Q9NZZ3 219 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 HESX1Q9UBX0 185 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 HMGXB4Q9UGU5 601 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 DNMT3LQ9UJW3 386 aa12.53□□□□□ -0.4
KNTC1-208ENST00000535410 K7ESF4 209 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms