RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 ACDQ96AP0 544 aa17.16■□□□□ 0.34
CLSTN3-204ENST00000535313 GDPD2Q9HCC8 539 aa17.16■□□□□ 0.34
CLSTN3-204ENST00000535313 PARD6AQ9NPB6 346 aa17.16■□□□□ 0.34
CLSTN3-204ENST00000535313 CFAP97Q9P2B7 532 aa17.16■□□□□ 0.34
CLSTN3-204ENST00000535313 CHORDC1Q9UHD1 332 aaPredicted RBP17.16■□□□□ 0.34
CLSTN3-204ENST00000535313 CDV3Q9UKY7 258 aaKnown RBP17.16■□□□□ 0.34
CLSTN3-204ENST00000535313 HELZP42694 1942 aaKnown RBP17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 TNFRSF10BO14763 440 aa17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 RPP40O75818 363 aaKnown RBP17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 TRIM49P0CI25 452 aa17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 TRIM49CP0CI26 452 aa17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 CCDC130P13994 396 aa17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 TGM1P22735 817 aa17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 ASPAP45381 313 aa17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 GCLMP48507 274 aa17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 ENPEPQ07075 957 aa17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 ORC1Q13415 861 aa17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 SYT13Q7L8C5 426 aa17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 ADGRG2Q8IZP9 1017 aa17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 FAM160A2Q8N612 972 aaPredicted RBP17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 GAB3Q8WWW8 586 aa17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 DNAI2Q9GZS0 605 aa17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 NACA2Q9H009 215 aa17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 FBXO44Q9H4M3 255 aa17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 CYP3A43Q9HB55 503 aa17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 FAM49BQ9NUQ9 324 aa17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 IL37Q9NZH6 218 aa17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 TBC1D14Q9P2M4 693 aa17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 HMGXB4Q9UGU5 601 aa17.15■□□□□ 0.34
CLSTN3-204ENST00000535313 DNAH14Q0VDD8 3507 aa17.14■□□□□ 0.33
CLSTN3-204ENST00000535313 COCHO43405 550 aa17.14■□□□□ 0.33
CLSTN3-204ENST00000535313 ADH1CP00326 375 aa17.14■□□□□ 0.33
CLSTN3-204ENST00000535313 CYP17A1P05093 508 aa17.14■□□□□ 0.33
CLSTN3-204ENST00000535313 FAM200BP0CF97 657 aa17.14■□□□□ 0.33
CLSTN3-204ENST00000535313 CCDC192P0DO97 292 aa17.14■□□□□ 0.33
CLSTN3-204ENST00000535313 TUBP50607 506 aa17.14■□□□□ 0.33
CLSTN3-204ENST00000535313 BECN1Q14457 450 aa17.14■□□□□ 0.33
CLSTN3-204ENST00000535313 DHCR24Q15392 516 aa17.14■□□□□ 0.33
CLSTN3-204ENST00000535313 SNX30Q5VWJ9 437 aa17.14■□□□□ 0.33
CLSTN3-204ENST00000535313 CACNA2D4Q7Z3S7 1137 aa17.14■□□□□ 0.33
CLSTN3-204ENST00000535313 EZH1Q92800 747 aaPredicted RBP17.14■□□□□ 0.33
CLSTN3-204ENST00000535313 HHIPQ96QV1 700 aa17.14■□□□□ 0.33
CLSTN3-204ENST00000535313 SMOQ99835 787 aa17.14■□□□□ 0.33
CLSTN3-204ENST00000535313 MMRN2Q9H8L6 949 aa17.14■□□□□ 0.33
CLSTN3-204ENST00000535313 POLR3BQ9NW08 1133 aaPredicted RBP17.14■□□□□ 0.33
CLSTN3-204ENST00000535313 GMIPQ9P107 970 aa17.14■□□□□ 0.33
CLSTN3-204ENST00000535313 E2F8A0AVK6 867 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 GOLGA6L4A6NEF3 574 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 SCAMP3O14828 347 aaKnown RBP17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 AXIN1O15169 862 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 APBB3O95704 486 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 ADORA2BP29275 332 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 GTF2H1P32780 548 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 OPRD1P41143 372 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 MAP3K7CLP57077 242 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 PPP3CAQ08209 521 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 INCA1Q0VD86 236 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 DMC1Q14565 340 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 EDRF1Q3B7T1 1238 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 C12orf29Q8N999 325 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 ZMIZ2Q8NF64 920 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 TAS1R2Q8TE23 839 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 NT5C1AQ9BXI3 368 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 NIF3L1Q9GZT8 377 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 CCSER2Q9H7U1 834 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 APOBEC3GQ9HC16 384 aaKnown RBP17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 TMEM8AQ9HCN3 771 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 CSNK1G1Q9HCP0 422 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 SEMA4GQ9NTN9 838 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 RMND1Q9NWS8 449 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 SH3BP1Q9Y3L3 701 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 SDK1Q7Z5N4 2213 aa17.13■□□□□ 0.33
CLSTN3-204ENST00000535313 FAM92AA1XBS5 289 aa17.12■□□□□ 0.33
CLSTN3-204ENST00000535313 FOXD2O60548 495 aaPredicted RBP17.12■□□□□ 0.33
CLSTN3-204ENST00000535313 BEST1O76090 585 aa17.12■□□□□ 0.33
CLSTN3-204ENST00000535313 ZDHHC11BP0C7U3 371 aa17.12■□□□□ 0.33
CLSTN3-204ENST00000535313 SEC13P55735 322 aa17.12■□□□□ 0.33
CLSTN3-204ENST00000535313 CSRP2Q16527 193 aa17.12■□□□□ 0.33
CLSTN3-204ENST00000535313 ZCWPW2Q504Y3 356 aa17.12■□□□□ 0.33
CLSTN3-204ENST00000535313 KRT39Q6A163 491 aa17.12■□□□□ 0.33
CLSTN3-204ENST00000535313 SMYD4Q8IYR2 804 aaPredicted RBP17.12■□□□□ 0.33
CLSTN3-204ENST00000535313 OTUB2Q96DC9 234 aa17.12■□□□□ 0.33
CLSTN3-204ENST00000535313 LOXL4Q96JB6 756 aa17.12■□□□□ 0.33
CLSTN3-204ENST00000535313 HNRNPABQ99729 332 aaKnown RBP17.12■□□□□ 0.33
CLSTN3-204ENST00000535313 TLR8Q9NR97 1041 aaKnown RBP17.12■□□□□ 0.33
CLSTN3-204ENST00000535313 K7EQS6 105 aa17.11■□□□□ 0.33
CLSTN3-204ENST00000535313 CETN3O15182 167 aa17.11■□□□□ 0.33
CLSTN3-204ENST00000535313 STX10O60499 249 aa17.11■□□□□ 0.33
CLSTN3-204ENST00000535313 EPB41P11171 864 aaKnown RBP17.11■□□□□ 0.33
CLSTN3-204ENST00000535313 ADH5P11766 374 aa17.11■□□□□ 0.33
CLSTN3-204ENST00000535313 CD58P19256 250 aa17.11■□□□□ 0.33
CLSTN3-204ENST00000535313 EIF2DP41214 584 aaKnown RBP17.11■□□□□ 0.33
CLSTN3-204ENST00000535313 ATXN1P54253 815 aaKnown RBP17.11■□□□□ 0.33
CLSTN3-204ENST00000535313 GAB4Q2WGN9 574 aa17.11■□□□□ 0.33
CLSTN3-204ENST00000535313 C2orf27AQ580R0 203 aa17.11■□□□□ 0.33
CLSTN3-204ENST00000535313 RHBDF2Q6PJF5 856 aa17.11■□□□□ 0.33
CLSTN3-204ENST00000535313 PRR23CQ6ZRP0 262 aa17.11■□□□□ 0.33
CLSTN3-204ENST00000535313 TSTD1Q8NFU3 115 aa17.11■□□□□ 0.33
CLSTN3-204ENST00000535313 USP33Q8TEY7 942 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms