RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 RNF180Q86T96 592 aa13.06□□□□□ -0.32
SPG11-203ENST00000535302 PIPSLA2A3N6 862 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 TRIM43BA6NCK2 446 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 SP100P23497 879 aaPredicted RBP13.05□□□□□ -0.32
SPG11-203ENST00000535302 TMED10P49755 219 aaKnown RBP13.05□□□□□ -0.32
SPG11-203ENST00000535302 EFHC1Q5JVL4 640 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 C9orf131Q5VYM1 1079 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 TYW3Q6IPR3 259 aaKnown RBP13.05□□□□□ -0.32
SPG11-203ENST00000535302 ACAD10Q6JQN1 1059 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 C16orf62Q7Z3J2 963 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 SAPCD2Q86UD0 394 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 XPO6Q96QU8 1125 aaKnown RBP13.05□□□□□ -0.32
SPG11-203ENST00000535302 CHST12Q9NRB3 414 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 IQGAP3Q86VI3 1631 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.05□□□□□ -0.32
SPG11-203ENST00000535302 PSMD3O43242 534 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 FAM107AO95990 144 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 ITGAXP20702 1163 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 CAP2P40123 477 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 ACADSBP45954 432 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 DGKKQ5KSL6 1271 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 SLC47A2Q86VL8 602 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 CASKIN2Q8WXE0 1202 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 SCUBE2Q9NQ36 999 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 TRPC4Q9UBN4 977 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 TRIM49D1C9J1S8 452 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 MAP3K13O43283 966 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 TMEM253P0C7T8 217 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 FOSL2P15408 326 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 ATP6V1B2P21281 511 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 DNAJC3Q13217 504 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 C16orf89Q6UX73 402 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 NT5DC3Q86UY8 548 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 CENPLQ8N0S6 344 aaPredicted RBP13.05□□□□□ -0.32
SPG11-203ENST00000535302 SLC20A1Q8WUM9 679 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 SLITRK1Q96PX8 696 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.05□□□□□ -0.32
SPG11-203ENST00000535302 DDTLA6NHG4 134 aaPredicted RBP13.05□□□□□ -0.32
SPG11-203ENST00000535302 EVPLLA8MZ36 301 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 NUDT14O95848 222 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 AKAP5P24588 427 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 ZNF177Q13360 481 aaPredicted RBP13.05□□□□□ -0.32
SPG11-203ENST00000535302 STYK1Q6J9G0 422 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 BBS7Q8IWZ6 715 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 FAM129AQ9BZQ8 928 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 IGFLR1Q9H665 355 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 USP15Q9Y4E8 981 aaPredicted RBP13.05□□□□□ -0.32
SPG11-203ENST00000535302 A0A087X0T9 212 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 STAG3L1P0CL83 205 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 GUCA1AP43080 201 aaPredicted RBP13.05□□□□□ -0.32
SPG11-203ENST00000535302 DYNC1I2Q13409 638 aaKnown RBP13.05□□□□□ -0.32
SPG11-203ENST00000535302 BFSP2Q13515 415 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 ICE2Q659A1 982 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 KLHL24Q6TFL4 600 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 GATAD2AQ86YP4 633 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 RNASE11Q8TAA1 199 aaKnown RBP13.05□□□□□ -0.32
SPG11-203ENST00000535302 FBXO32Q969P5 355 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 TPD52L3Q96J77 140 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 USP42Q9H9J4 1324 aaKnown RBP13.05□□□□□ -0.32
SPG11-203ENST00000535302 STAU1O95793 577 aaKnown RBP13.05□□□□□ -0.32
SPG11-203ENST00000535302 CYP11B2P19099 503 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 TGM2P21980 687 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 ERVK-24P63145 666 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 ADGRF2Q8IZF7 708 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 CALML6Q8TD86 181 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 RIT2Q99578 217 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 RPS6KB2Q9UBS0 482 aa13.05□□□□□ -0.32
SPG11-203ENST00000535302 RNF17Q9BXT8 1623 aaKnown RBP13.05□□□□□ -0.32
SPG11-203ENST00000535302 FAM25AB3EWG3 89 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 FAM25CB3EWG5 89 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 FAM25GB3EWG6 89 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 CDC42EP1Q00587 391 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 ZSWIM7Q19AV6 140 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 PPIL6Q8IXY8 311 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 OSMRQ99650 979 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 SMG5Q9UPR3 1016 aaKnown RBP13.04□□□□□ -0.32
SPG11-203ENST00000535302 SSU72P8A0A1W2PR75 194 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 NR5A2O00482 541 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 SUPT7LO94864 414 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 ALBP02768 609 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 SNRPAP09012 282 aaKnown RBP13.04□□□□□ -0.32
SPG11-203ENST00000535302 ENO2P09104 434 aaPredicted RBP13.04□□□□□ -0.32
SPG11-203ENST00000535302 ADSLP30566 484 aaPredicted RBP13.04□□□□□ -0.32
SPG11-203ENST00000535302 TTC33Q6PID6 262 aaPredicted RBP13.04□□□□□ -0.32
SPG11-203ENST00000535302 KIRREL3Q8IZU9 778 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 TPCN2Q8NHX9 752 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 GLT1D1Q96MS3 346 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 DLGAP2Q9P1A6 1054 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 TUBE1Q9UJT0 475 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 ZNF23P17027 643 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 TNNI3P19429 210 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 SERPINB1P30740 379 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 CD248Q9HCU0 757 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 SETD4Q9NVD3 440 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 NDOR1Q9UHB4 597 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 GMFGO60234 142 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 ERVK-10P10266 1014 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 C3orf67Q6ZVT6 689 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 FBXO36Q8NEA4 188 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 FAM172AQ8WUF8 416 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms