RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 GUCD1Q96NT3 240 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 DDX47Q9H0S4 455 aaKnown RBP17.88■□□□□ 0.45
VPS51-216ENST00000534591 CSNK1G1Q9HCP0 422 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 MTMR10Q9NXD2 777 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 DMGDHQ9UI17 866 aaKnown RBP17.88■□□□□ 0.45
VPS51-216ENST00000534591 ADAM28Q9UKQ2 775 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 FAN1Q9Y2M0 1017 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 PRG3Q9Y2Y8 225 aaPredicted RBP17.88■□□□□ 0.45
VPS51-216ENST00000534591 UNC80Q8N2C7 3258 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.88■□□□□ 0.45
VPS51-216ENST00000534591 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.88■□□□□ 0.45
VPS51-216ENST00000534591 TBKBP1A7MCY6 615 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 F8W810 466 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 NRP1O14786 923 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 RAD51CO43502 376 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 GLI1P08151 1106 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 TCF4P15884 667 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 TNFRSF8P28908 595 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 GJC1P36383 396 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 PTPN9P43378 593 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 RABGGTBP53611 331 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 MAP3K7CLP57077 242 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 ELAVL2Q12926 359 aaKnown RBP17.88■□□□□ 0.45
VPS51-216ENST00000534591 DHX34Q14147 1143 aaKnown RBP17.88■□□□□ 0.45
VPS51-216ENST00000534591 SMC1AQ14683 1233 aaKnown RBP17.88■□□□□ 0.45
VPS51-216ENST00000534591 CCDC14Q49A88 953 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 ZFYVE27Q5T4F4 411 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 TRNP1Q6NT89 227 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 CCNI2Q6ZMN8 369 aaPredicted RBP17.88■□□□□ 0.45
VPS51-216ENST00000534591 ADAT2Q7Z6V5 191 aaKnown RBP17.88■□□□□ 0.45
VPS51-216ENST00000534591 IFT20Q8IY31 132 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 PRELID2Q8N945 189 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 C12orf50Q8NA57 414 aaPredicted RBP17.88■□□□□ 0.45
VPS51-216ENST00000534591 HDAC7Q8WUI4 952 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 SMOQ99835 787 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 OSBPL8Q9BZF1 889 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 MTIF3Q9H2K0 278 aaKnown RBP17.88■□□□□ 0.45
VPS51-216ENST00000534591 HOMER3Q9NSC5 361 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 NR2E1Q9Y466 385 aa17.88■□□□□ 0.45
VPS51-216ENST00000534591 ABHD14A-ACY1A0A1B0GW23 586 aa17.87■□□□□ 0.45
VPS51-216ENST00000534591 FAM187AA6NFU0 413 aa17.87■□□□□ 0.45
VPS51-216ENST00000534591 HSF2BPO75031 334 aa17.87■□□□□ 0.45
VPS51-216ENST00000534591 GRAP2O75791 330 aa17.87■□□□□ 0.45
VPS51-216ENST00000534591 BEST1O76090 585 aa17.87■□□□□ 0.45
VPS51-216ENST00000534591 HEXIM1O94992 359 aaKnown RBP17.87■□□□□ 0.45
VPS51-216ENST00000534591 RARAP10276 462 aa17.87■□□□□ 0.45
VPS51-216ENST00000534591 MIPP30301 263 aa17.87■□□□□ 0.45
VPS51-216ENST00000534591 GATMP50440 423 aa17.87■□□□□ 0.45
VPS51-216ENST00000534591 MRPS5P82675 430 aaKnown RBP17.87■□□□□ 0.45
VPS51-216ENST00000534591 SLC7A5Q01650 507 aa17.87■□□□□ 0.45
VPS51-216ENST00000534591 ADIGQ0VDE8 80 aa17.87■□□□□ 0.45
VPS51-216ENST00000534591 SIX1Q15475 284 aaPredicted RBP17.87■□□□□ 0.45
VPS51-216ENST00000534591 RAB41Q5JT25 222 aa17.87■□□□□ 0.45
VPS51-216ENST00000534591 C4orf50Q6ZRC1 276 aa17.87■□□□□ 0.45
VPS51-216ENST00000534591 TMCO2Q7Z6W1 182 aaPredicted RBP17.87■□□□□ 0.45
VPS51-216ENST00000534591 DCP1BQ8IZD4 617 aaKnown RBP17.87■□□□□ 0.45
VPS51-216ENST00000534591 SIX6OS1Q8N1H7 587 aa17.87■□□□□ 0.45
VPS51-216ENST00000534591 LRRC43Q8N309 656 aa17.87■□□□□ 0.45
VPS51-216ENST00000534591 OR10T2Q8NGX3 314 aa17.87■□□□□ 0.45
VPS51-216ENST00000534591 MAGOHBQ96A72 148 aaKnown RBP17.87■□□□□ 0.45
VPS51-216ENST00000534591 SLITRK1Q96PX8 696 aa17.87■□□□□ 0.45
VPS51-216ENST00000534591 PNPLA8Q9NP80 782 aa17.87■□□□□ 0.45
VPS51-216ENST00000534591 USP18Q9UMW8 372 aa17.87■□□□□ 0.45
VPS51-216ENST00000534591 EFR3BQ9Y2G0 817 aa17.87■□□□□ 0.45
VPS51-216ENST00000534591 YBX2Q9Y2T7 364 aaKnown RBP17.87■□□□□ 0.45
VPS51-216ENST00000534591 TRUB2O95900 331 aaKnown RBP17.86■□□□□ 0.45
VPS51-216ENST00000534591 RALAP11233 206 aa17.86■□□□□ 0.45
VPS51-216ENST00000534591 MYOGP15173 224 aa17.86■□□□□ 0.45
VPS51-216ENST00000534591 SLC11A1P49279 550 aa17.86■□□□□ 0.45
VPS51-216ENST00000534591 FNTAP49354 379 aa17.86■□□□□ 0.45
VPS51-216ENST00000534591 ADCY1Q08828 1119 aa17.86■□□□□ 0.45
VPS51-216ENST00000534591 TAF5Q15542 800 aa17.86■□□□□ 0.45
VPS51-216ENST00000534591 ATP13A4Q4VNC1 1196 aa17.86■□□□□ 0.45
VPS51-216ENST00000534591 ZNF697Q5TEC3 545 aa17.86■□□□□ 0.45
VPS51-216ENST00000534591 SPOCD1Q6ZMY3 1216 aa17.86■□□□□ 0.45
VPS51-216ENST00000534591 EIF1ADQ8N9N8 165 aaKnown RBP17.86■□□□□ 0.45
VPS51-216ENST00000534591 ZMIZ2Q8NF64 920 aa17.86■□□□□ 0.45
VPS51-216ENST00000534591 CLEC4CQ8WTT0 213 aa17.86■□□□□ 0.45
VPS51-216ENST00000534591 RNF25Q96BH1 459 aaPredicted RBP17.86■□□□□ 0.45
VPS51-216ENST00000534591 DDX23Q9BUQ8 820 aaKnown RBP17.86■□□□□ 0.45
VPS51-216ENST00000534591 LRRC19Q9H756 370 aa17.86■□□□□ 0.45
VPS51-216ENST00000534591 DMAP1Q9NPF5 467 aaPredicted RBP17.86■□□□□ 0.45
VPS51-216ENST00000534591 CNGB3Q9NQW8 809 aa17.86■□□□□ 0.45
VPS51-216ENST00000534591 GDF3Q9NR23 364 aa17.86■□□□□ 0.45
VPS51-216ENST00000534591 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.86■□□□□ 0.45
VPS51-216ENST00000534591 PCYOX1Q9UHG3 505 aa17.86■□□□□ 0.45
VPS51-216ENST00000534591 SLC4A7Q9Y6M7 1214 aa17.86■□□□□ 0.45
VPS51-216ENST00000534591 SF3B1O75533 1304 aaKnown RBP eCLIP17.85■□□□□ 0.45
VPS51-216ENST00000534591 COL4A4P53420 1690 aaPredicted RBP17.85■□□□□ 0.45
VPS51-216ENST00000534591 TCRBV7S2A1N4TA0A589 114 aa17.85■□□□□ 0.45
VPS51-216ENST00000534591 BHMG1C9JSJ3 638 aaPredicted RBP17.85■□□□□ 0.45
VPS51-216ENST00000534591 EFCAB14O75071 495 aa17.85■□□□□ 0.45
VPS51-216ENST00000534591 DAB1O75553 588 aa17.85■□□□□ 0.45
VPS51-216ENST00000534591 IL1R2P27930 398 aa17.85■□□□□ 0.45
VPS51-216ENST00000534591 TKTL1P51854 596 aa17.85■□□□□ 0.45
VPS51-216ENST00000534591 KLF1Q13351 362 aaPredicted RBP17.85■□□□□ 0.45
VPS51-216ENST00000534591 TXNRD3NBQ6F5E7 133 aa17.85■□□□□ 0.45
VPS51-216ENST00000534591 LRRTM3Q86VH5 581 aa17.85■□□□□ 0.45
VPS51-216ENST00000534591 ZDHHC14Q8IZN3 488 aa17.85■□□□□ 0.45
VPS51-216ENST00000534591 SCML4Q8N228 414 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms