RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 VSIG10LQ86VR7 867 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 C1orf54Q8WWF1 131 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 BTBD9Q96Q07 612 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 HERPUD2Q9BSE4 406 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 MRPS26Q9BYN8 205 aaKnown RBP19.97■□□□□ 0.79
SMPD1-210ENST00000534405 DNAJC17Q9NVM6 304 aaKnown RBP19.97■□□□□ 0.79
SMPD1-210ENST00000534405 FAF1Q9UNN5 650 aaPredicted RBP19.97■□□□□ 0.79
SMPD1-210ENST00000534405 SORBS3O60504 671 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 ZBED1O96006 694 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 IVDP26440 423 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 WNT7BP56706 349 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 SP4Q02446 784 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 KRT17Q04695 432 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 EN1Q05925 392 aaPredicted RBP19.97■□□□□ 0.79
SMPD1-210ENST00000534405 MAPK6Q16659 721 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 C2CD6Q53TS8 623 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 NLRX1Q86UT6 975 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 TDRPQ86YL5 185 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 RELL1Q8IUW5 271 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 SRPK1Q96SB4 655 aaKnown RBP19.97■□□□□ 0.79
SMPD1-210ENST00000534405 FAM213AQ9BRX8 229 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 TRIM55Q9BYV6 548 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 S100A14Q9HCY8 104 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 RNF146Q9NTX7 359 aa19.97■□□□□ 0.79
SMPD1-210ENST00000534405 KIAA1217Q5T5P2 1943 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 MYPNQ86TC9 1320 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 CCDC162PA2VCL2 907 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 HNRNPDLO14979 420 aaKnown RBP19.96■□□□□ 0.79
SMPD1-210ENST00000534405 NR3C2P08235 984 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 ABHD2P08910 425 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 DHRS4L2Q6PKH6 230 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 PRUNE1Q86TP1 453 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 ULK2Q8IYT8 1036 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 GPD1LQ8N335 351 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 PLGRKTQ9HBL7 147 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 PDLIM7Q9NR12 457 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 FBXO6Q9NRD1 293 aaPredicted RBP19.96■□□□□ 0.79
SMPD1-210ENST00000534405 THEGQ9P2T0 379 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 CTDP1Q9Y5B0 961 aaPredicted RBP19.96■□□□□ 0.79
SMPD1-210ENST00000534405 A0A0G2JND7 137 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 TYROBPO43914 113 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 ZBED4O75132 1171 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 KCNA2P16389 499 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 CA4P22748 312 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 ITGA8P53708 1063 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 SWSAP1Q6NVH7 229 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 FBXL19Q6PCT2 694 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 MARVELD2Q8N4S9 558 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 SAMD3Q8N6K7 520 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 SCAIQ8N9R8 606 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 SLC7A8Q9UHI5 535 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 ANAPC7Q9UJX3 599 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 RGPD3A6NKT7 1758 aaPredicted RBP19.96■□□□□ 0.79
SMPD1-210ENST00000534405 RGPD4Q7Z3J3 1758 aa19.96■□□□□ 0.79
SMPD1-210ENST00000534405 B2RBV5 119 aa19.95■□□□□ 0.78
SMPD1-210ENST00000534405 STK10O94804 968 aaKnown RBP19.95■□□□□ 0.78
SMPD1-210ENST00000534405 UNGP13051 313 aaPredicted RBP19.95■□□□□ 0.78
SMPD1-210ENST00000534405 GCAP28676 217 aa19.95■□□□□ 0.78
SMPD1-210ENST00000534405 CCR3P51677 355 aa19.95■□□□□ 0.78
SMPD1-210ENST00000534405 ZBTB16Q05516 673 aa19.95■□□□□ 0.78
SMPD1-210ENST00000534405 CCT7Q99832 543 aa19.95■□□□□ 0.78
SMPD1-210ENST00000534405 KIAA1586Q9HCI6 787 aa19.95■□□□□ 0.78
SMPD1-210ENST00000534405 ASIC3Q9UHC3 531 aa19.95■□□□□ 0.78
SMPD1-210ENST00000534405 ARID2Q68CP9 1835 aa19.95■□□□□ 0.78
SMPD1-210ENST00000534405 FSCN2O14926 492 aa19.95■□□□□ 0.78
SMPD1-210ENST00000534405 NAA20P61599 178 aa19.95■□□□□ 0.78
SMPD1-210ENST00000534405 KYAT3Q6YP21 454 aaKnown RBP19.95■□□□□ 0.78
SMPD1-210ENST00000534405 CCDC60Q8IWA6 550 aaPredicted RBP19.95■□□□□ 0.78
SMPD1-210ENST00000534405 CPA5Q8WXQ8 436 aa19.95■□□□□ 0.78
SMPD1-210ENST00000534405 SENP7Q9BQF6 1050 aa19.95■□□□□ 0.78
SMPD1-210ENST00000534405 KCNK13Q9HB14 408 aa19.95■□□□□ 0.78
SMPD1-210ENST00000534405 CHST7Q9NS84 486 aa19.95■□□□□ 0.78
SMPD1-210ENST00000534405 LZTS1Q9Y250 596 aa19.95■□□□□ 0.78
SMPD1-210ENST00000534405 NEU2Q9Y3R4 380 aa19.95■□□□□ 0.78
SMPD1-210ENST00000534405 RRM1P23921 792 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 CCND2P30279 289 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 GCNT1Q02742 428 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 OVGP1Q12889 678 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 C1orf146Q5VVC0 180 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 LVRNQ6Q4G3 990 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 C15orf39Q6ZRI6 1047 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 ZNF410Q86VK4 478 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 MCOLN2Q8IZK6 566 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 RDM1Q8NG50 284 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 ATG4AQ8WYN0 398 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 PHF12Q96QT6 1004 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 TRAIPQ9BWF2 469 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 PARP14Q460N5 1801 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 SRCAPQ6ZRS2 3230 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 MAPK4P31152 587 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 NEPROQ6NW34 567 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 SYDE1Q6ZW31 735 aaPredicted RBP19.94■□□□□ 0.78
SMPD1-210ENST00000534405 ERI1Q8IV48 349 aaKnown RBP19.94■□□□□ 0.78
SMPD1-210ENST00000534405 GIPC3Q8TF64 312 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 GPRASP2Q96D09 838 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 MTBPQ96DY7 904 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 CGREF1Q99674 301 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 GRIP2Q9C0E4 1043 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 AK5Q9Y6K8 562 aa19.94■□□□□ 0.78
SMPD1-210ENST00000534405 DENRO43583 198 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms