RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 HECTD1Q9ULT8 2610 aa13.15□□□□□ -0.3
SVIP-205ENST00000533774 ZNF840PA6NDX5 716 aa13.15□□□□□ -0.3
SVIP-205ENST00000533774 ATXN7O15265 892 aaPredicted RBP13.15□□□□□ -0.3
SVIP-205ENST00000533774 PLA2G4BP0C869 781 aa13.15□□□□□ -0.3
SVIP-205ENST00000533774 HOXB2P14652 356 aa13.15□□□□□ -0.3
SVIP-205ENST00000533774 POLR2BP30876 1174 aaKnown RBP13.15□□□□□ -0.3
SVIP-205ENST00000533774 EGFLAMQ63HQ2 1017 aa13.15□□□□□ -0.3
SVIP-205ENST00000533774 FAM171BQ6P995 826 aa13.15□□□□□ -0.3
SVIP-205ENST00000533774 SPATA2LQ8IUW3 424 aaPredicted RBP13.15□□□□□ -0.3
SVIP-205ENST00000533774 ZNF843Q8N446 348 aa13.15□□□□□ -0.3
SVIP-205ENST00000533774 SETD7Q8WTS6 366 aaKnown RBP13.15□□□□□ -0.3
SVIP-205ENST00000533774 WBP2Q969T9 261 aa13.15□□□□□ -0.3
SVIP-205ENST00000533774 REEP2Q9BRK0 252 aa13.15□□□□□ -0.3
SVIP-205ENST00000533774 PRORYQ9H606 182 aa13.15□□□□□ -0.3
SVIP-205ENST00000533774 PRDM16Q9HAZ2 1276 aa13.15□□□□□ -0.3
SVIP-205ENST00000533774 WDR70Q9NW82 654 aa13.15□□□□□ -0.3
SVIP-205ENST00000533774 LARSQ9P2J5 1176 aaKnown RBP13.15□□□□□ -0.3
SVIP-205ENST00000533774 KCNG1Q9UIX4 513 aa13.15□□□□□ -0.3
SVIP-205ENST00000533774 METRNQ9UJH8 293 aa13.15□□□□□ -0.3
SVIP-205ENST00000533774 BTBD3Q9Y2F9 522 aa13.15□□□□□ -0.3
SVIP-205ENST00000533774 FNDC3AQ9Y2H6 1198 aaKnown RBP13.15□□□□□ -0.3
SVIP-205ENST00000533774 RAI2Q9Y5P3 530 aa13.15□□□□□ -0.3
SVIP-205ENST00000533774 CKAP5Q14008 2032 aa13.15□□□□□ -0.3
SVIP-205ENST00000533774 TBC1D3BA6NDS4 549 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 GOLGA8CPA6NN73 597 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 H0YCG3 227 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 K7ENM7 598 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 TK2O00142 265 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 GABRDO14764 452 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 TULP3O75386 442 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 OAS1P00973 400 aaKnown RBP13.14□□□□□ -0.31
SVIP-205ENST00000533774 NTSR1P30989 418 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 MAGEA11P43364 429 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 ADALQ6DHV7 355 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 DBX2Q6ZNG2 339 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 C1orf127Q8N9H9 656 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 IPO4Q8TEX9 1081 aaKnown RBP13.14□□□□□ -0.31
SVIP-205ENST00000533774 C8orf76Q96K31 380 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 ZFRQ96KR1 1074 aaKnown RBP13.14□□□□□ -0.31
SVIP-205ENST00000533774 SPATA17Q96L03 361 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 ZNF560Q96MR9 790 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 TTLL2Q9BWV7 592 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 FAM124BQ9H5Z6 455 aaPredicted RBP13.14□□□□□ -0.31
SVIP-205ENST00000533774 CRTAC1Q9NQ79 661 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 TMEM30AQ9NV96 361 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 TRPM5Q9NZQ8 1165 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 AGAP1Q9UPQ3 857 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 BOLA1Q9Y3E2 137 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 RAD54BQ9Y620 910 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 STYXL1Q9Y6J8 313 aa13.14□□□□□ -0.31
SVIP-205ENST00000533774 SLC9A3R1O14745 358 aaPredicted RBP13.13□□□□□ -0.31
SVIP-205ENST00000533774 CILPO75339 1184 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 ADH1CP00326 375 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 ITGB3P05106 788 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 PFKLP17858 780 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 BDNFP23560 247 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 LMO2P25791 158 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 ADSSP30520 456 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 ABCG1P45844 678 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 TRAPPC10P48553 1259 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 ZNF131P52739 623 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 PSMC1P62191 440 aaKnown RBP13.13□□□□□ -0.31
SVIP-205ENST00000533774 MYL7Q01449 175 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 ANKRD1Q15327 319 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 SOWAHAQ2M3V2 549 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 TMEM119Q4V9L6 283 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 C10orf76Q5T2E6 689 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 PCSK4Q6UW60 755 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 ZCCHC9Q8N567 271 aaKnown RBP13.13□□□□□ -0.31
SVIP-205ENST00000533774 MYCT1Q8N699 235 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 KIAA1958Q8N8K9 716 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 TERB1Q8NA31 727 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 DNASE2BQ8WZ79 361 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 MYLPFQ96A32 169 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 FUBP3Q96I24 572 aaKnown RBP eCLIP13.13□□□□□ -0.31
SVIP-205ENST00000533774 RAB34Q9BZG1 259 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 TRIM9Q9C026 710 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 GAREM1Q9H706 876 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 TM7SF3Q9NS93 570 aa13.13□□□□□ -0.31
SVIP-205ENST00000533774 AGO2Q9UKV8 859 aaKnown RBP13.13□□□□□ -0.31
SVIP-205ENST00000533774 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.12□□□□□ -0.31
SVIP-205ENST00000533774 WASH3PC4AMC7 463 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 TLX3O43711 291 aaPredicted RBP13.12□□□□□ -0.31
SVIP-205ENST00000533774 HUS1O60921 280 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 ZNF217O75362 1048 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 PLCG1P19174 1290 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 PDE6CP51160 858 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 CACNA2D1P54289 1103 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 GTF2BQ00403 316 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 DENND5BQ6ZUT9 1274 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 ZNF605Q86T29 641 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 TMEM25Q86YD3 366 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 ADGRF2Q8IZF7 708 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 TMEM86AQ8N2M4 240 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 FBXO18Q8NFZ0 1043 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 KCNV2Q8TDN2 545 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 KBTBD7Q8WVZ9 684 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 MRGPRX1Q96LB2 322 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 ZDHHC5Q9C0B5 715 aa13.12□□□□□ -0.31
SVIP-205ENST00000533774 GDAP2Q9NXN4 497 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms