RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 MIS12Q9H081 205 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 SYNCQ9H7C4 482 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 SFXN1Q9H9B4 322 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 ZNF334Q9HCZ1 680 aaPredicted RBP12.54□□□□□ -0.4
COMMD9-208ENST00000533643 CLDND1Q9NY35 253 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 ADAM22Q9P0K1 906 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 MAGED2Q9UNF1 606 aaPredicted RBP12.54□□□□□ -0.4
COMMD9-208ENST00000533643 SCML2Q9UQR0 700 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 FAM92AA1XBS5 289 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 SPDYE4A6NLX3 237 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 ARHGAP6O43182 974 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 XYLBO75191 536 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 TBX10O75333 385 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 FBXO21O94952 628 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 ZBED1O96006 694 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 CALB1P05937 261 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 USP17L7P0C7H9 530 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 HOXB8P17481 243 aaPredicted RBP12.53□□□□□ -0.4
COMMD9-208ENST00000533643 PTPN2P17706 415 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 PGFP49763 221 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 SNX16P57768 344 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 IFRD2Q12894 506 aaPredicted RBP12.53□□□□□ -0.4
COMMD9-208ENST00000533643 TAF10Q12962 218 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 CCDC85BQ15834 202 aaPredicted RBP12.53□□□□□ -0.4
COMMD9-208ENST00000533643 TAF12Q16514 161 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 OR6B2Q6IFH4 312 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 FAM183BPQ6ZVS7 135 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 BHLHA9Q7RTU4 235 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 PHLDB2Q86SQ0 1253 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 TMC8Q8IU68 726 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 SCML4Q8N228 414 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 IPO4Q8TEX9 1081 aaKnown RBP12.53□□□□□ -0.4
COMMD9-208ENST00000533643 PABPC5Q96DU9 382 aaKnown RBP12.53□□□□□ -0.4
COMMD9-208ENST00000533643 TRMT2BQ96GJ1 504 aaKnown RBP12.53□□□□□ -0.4
COMMD9-208ENST00000533643 VCPIP1Q96JH7 1222 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 CORO1BQ9BR76 489 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 PACSIN1Q9BY11 444 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 FBXO44Q9H4M3 255 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 CNGB3Q9NQW8 809 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 HCFC1R1Q9NWW0 138 aa12.53□□□□□ -0.4
COMMD9-208ENST00000533643 REXO2Q9Y3B8 237 aaKnown RBP12.53□□□□□ -0.4
COMMD9-208ENST00000533643 H2AFZP0C0S5 128 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 MAGEA1P43355 309 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 EPHA5P54756 1037 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 GALCP54803 685 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 DAOAP59103 153 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 MRPS5P82675 430 aaKnown RBP12.52□□□□□ -0.41
COMMD9-208ENST00000533643 ZNF268Q14587 947 aaPredicted RBP12.52□□□□□ -0.41
COMMD9-208ENST00000533643 SPA17Q15506 151 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 TAF5Q15542 800 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 C10orf76Q5T2E6 689 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 TOGARAM2Q6ZUX3 1019 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 H2AFVQ71UI9 128 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 SCD5Q86SK9 330 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 ACRBPQ8NEB7 543 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 SMG7Q92540 1137 aaKnown RBP12.52□□□□□ -0.41
COMMD9-208ENST00000533643 KHSRPQ92945 711 aaKnown RBP eCLIP12.52□□□□□ -0.41
COMMD9-208ENST00000533643 FBXO32Q969P5 355 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 MCRS1Q96EZ8 462 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 PIWIL1Q96J94 861 aaKnown RBP12.52□□□□□ -0.41
COMMD9-208ENST00000533643 DESI2Q9BSY9 194 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 APOL5Q9BWW9 433 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 S1PR5Q9H228 398 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 IL21Q9HBE4 155 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 EHD2Q9NZN4 543 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 GMIPQ9P107 970 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 DNMT3BQ9UBC3 853 aaKnown RBP12.52□□□□□ -0.41
COMMD9-208ENST00000533643 CHORDC1Q9UHD1 332 aaPredicted RBP12.52□□□□□ -0.41
COMMD9-208ENST00000533643 PCDHA13Q9Y5I0 950 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 NCANO14594 1321 aa12.52□□□□□ -0.41
COMMD9-208ENST00000533643 MTCL1Q9Y4B5 1905 aaKnown RBP12.52□□□□□ -0.41
COMMD9-208ENST00000533643 PATJQ8NI35 1801 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 TCRBV5S1A1TA0A578 114 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 ANKRD62A6NC57 917 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 YJEFN3A6XGL0 299 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 E7ENQ6 273 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 GOLGA8SH3BPF8 625 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 ATMINO43313 823 aaPredicted RBP12.51□□□□□ -0.41
COMMD9-208ENST00000533643 NRDCO43847 1150 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 F11P03951 625 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 CYP1A2P05177 515 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 ZDHHC11BP0C7U3 371 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 MYBL1P10243 752 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 ABCB4P21439 1286 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 RRM1P23921 792 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 GSCP56915 257 aaPredicted RBP12.51□□□□□ -0.41
COMMD9-208ENST00000533643 GPC5P78333 572 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 NTHL1P78549 312 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 SLC6A3Q01959 620 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 OLFML1Q6UWY5 402 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 EP400NLQ6ZTU2 488 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 HFE2Q6ZVN8 426 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 GAREM2Q75VX8 874 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 GRASPQ7Z6J2 395 aaPredicted RBP12.51□□□□□ -0.41
COMMD9-208ENST00000533643 GPR149Q86SP6 731 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 TMEM150AQ86TG1 271 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 MON1AQ86VX9 555 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 ZDHHC17Q8IUH5 632 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 OVCA2Q8WZ82 227 aa12.51□□□□□ -0.41
COMMD9-208ENST00000533643 IRGQQ8WZA9 623 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms