RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 LMO2P25791 158 aa16.76■□□□□ 0.27
CHMP4A-207ENST00000533523 AFMP43652 599 aa16.76■□□□□ 0.27
CHMP4A-207ENST00000533523 DHPSP49366 369 aaPredicted RBP16.76■□□□□ 0.27
CHMP4A-207ENST00000533523 USP46P62068 366 aa16.76■□□□□ 0.27
CHMP4A-207ENST00000533523 MAPRE1Q15691 268 aaKnown RBP16.76■□□□□ 0.27
CHMP4A-207ENST00000533523 MDH1BQ5I0G3 518 aa16.76■□□□□ 0.27
CHMP4A-207ENST00000533523 CCDC183Q5T5S1 534 aa16.76■□□□□ 0.27
CHMP4A-207ENST00000533523 VSTM1Q6UX27 236 aa16.76■□□□□ 0.27
CHMP4A-207ENST00000533523 DENND5BQ6ZUT9 1274 aa16.76■□□□□ 0.27
CHMP4A-207ENST00000533523 FILIP1Q7Z7B0 1213 aa16.76■□□□□ 0.27
CHMP4A-207ENST00000533523 SYAP1Q96A49 352 aaPredicted RBP16.76■□□□□ 0.27
CHMP4A-207ENST00000533523 TIGD1Q96MW7 591 aa16.76■□□□□ 0.27
CHMP4A-207ENST00000533523 MMS19Q96T76 1030 aa16.76■□□□□ 0.27
CHMP4A-207ENST00000533523 NUP62CLQ9H1M0 184 aa16.76■□□□□ 0.27
CHMP4A-207ENST00000533523 INTS13Q9NVM9 706 aa16.76■□□□□ 0.27
CHMP4A-207ENST00000533523 SMPD4Q9NXE4 827 aa16.76■□□□□ 0.27
CHMP4A-207ENST00000533523 SERTAD1Q9UHV2 236 aa16.76■□□□□ 0.27
CHMP4A-207ENST00000533523 MMP17Q9ULZ9 603 aa16.76■□□□□ 0.27
CHMP4A-207ENST00000533523 ANTXRLA6NF34 631 aa16.75■□□□□ 0.27
CHMP4A-207ENST00000533523 SRRM3A6NNA2 597 aaPredicted RBP16.75■□□□□ 0.27
CHMP4A-207ENST00000533523 K7EQS6 105 aa16.75■□□□□ 0.27
CHMP4A-207ENST00000533523 TRIM66O15016 1216 aa16.75■□□□□ 0.27
CHMP4A-207ENST00000533523 KHNYNO15037 678 aaKnown RBP16.75■□□□□ 0.27
CHMP4A-207ENST00000533523 ABL1P00519 1130 aa16.75■□□□□ 0.27
CHMP4A-207ENST00000533523 WARSP23381 471 aaKnown RBP16.75■□□□□ 0.27
CHMP4A-207ENST00000533523 ZXDBP98169 803 aa16.75■□□□□ 0.27
CHMP4A-207ENST00000533523 IFRD2Q12894 506 aaPredicted RBP16.75■□□□□ 0.27
CHMP4A-207ENST00000533523 FOXC1Q12948 553 aa16.75■□□□□ 0.27
CHMP4A-207ENST00000533523 SH3PXD2AQ5TCZ1 1133 aa16.75■□□□□ 0.27
CHMP4A-207ENST00000533523 KRBA2Q6ZNG9 492 aa16.75■□□□□ 0.27
CHMP4A-207ENST00000533523 CBWD2Q8IUF1 395 aa16.75■□□□□ 0.27
CHMP4A-207ENST00000533523 MDGA1Q8NFP4 955 aa16.75■□□□□ 0.27
CHMP4A-207ENST00000533523 CCDC34Q96HJ3 373 aa16.75■□□□□ 0.27
CHMP4A-207ENST00000533523 CNOT6LQ96LI5 555 aaKnown RBP16.75■□□□□ 0.27
CHMP4A-207ENST00000533523 BLZF1Q9H2G9 400 aa16.75■□□□□ 0.27
CHMP4A-207ENST00000533523 TMEM9BQ9NQ34 198 aa16.75■□□□□ 0.27
CHMP4A-207ENST00000533523 CPQQ9Y646 472 aa16.75■□□□□ 0.27
CHMP4A-207ENST00000533523 ADAMTS20P59510 1910 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 TENM4Q6N022 2769 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 ZNF233A6NK53 670 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 PATE3B3GLJ2 98 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 F8VP50 259 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 ALDH1A2O94788 518 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 KLF8O95600 359 aaPredicted RBP16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 SNRPFP62306 86 aaKnown RBP16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 KDSRQ06136 332 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 EHHADHQ08426 723 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 CUL4BQ13620 913 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 DUOXA2Q1HG44 320 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 GAB4Q2WGN9 574 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 DPH6Q7L8W6 267 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 HS2ST1Q7LGA3 356 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 RASSF3Q86WH2 238 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 SFTPA1Q8IWL2 248 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 ALLCQ8N6M5 410 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 GLIS3Q8NEA6 775 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 PAGE5Q96GU1 130 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 PCED1BQ96HM7 432 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 SPACA7Q96KW9 195 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 SNX25Q9H3E2 840 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 HSPBP1Q9NZL4 362 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 EHD2Q9NZN4 543 aa16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 BCCIPQ9P287 314 aaKnown RBP eCLIP16.74■□□□□ 0.27
CHMP4A-207ENST00000533523 APODP05090 189 aa16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 DLATP10515 647 aaKnown RBP16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 PFKLP17858 780 aa16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 RING1Q06587 406 aa16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 SURF1Q15526 300 aa16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 CRY1Q16526 586 aa16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 CAMK4Q16566 473 aa16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 UAP1L1Q3KQV9 507 aa16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 ARMCX6Q7L4S7 300 aa16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 EPM2AIP1Q7L775 607 aaPredicted RBP16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 LIMS2Q7Z4I7 341 aa16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 WDR49Q8IV35 697 aa16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 TXNDC5Q8NBS9 432 aaKnown RBP16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 MYCBPAPQ8TBZ2 947 aa16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 ZNF507Q8TCN5 953 aa16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 PIGKQ92643 395 aa16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 HPS3Q969F9 1004 aa16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 CCDC47Q96A33 483 aaKnown RBP16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 CEP295NLQ96MC4 621 aa16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 MRPL45Q9BRJ2 306 aaKnown RBP16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 TTLL2Q9BWV7 592 aa16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 EXOC1Q9NV70 894 aa16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 CFAP97Q9P2B7 532 aa16.73■□□□□ 0.27
CHMP4A-207ENST00000533523 CFAP46Q8IYW2 2715 aa16.72■□□□□ 0.27
CHMP4A-207ENST00000533523 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.72■□□□□ 0.27
CHMP4A-207ENST00000533523 ZNF840PA6NDX5 716 aa16.72■□□□□ 0.27
CHMP4A-207ENST00000533523 SLC9A3R1O14745 358 aaPredicted RBP16.72■□□□□ 0.27
CHMP4A-207ENST00000533523 CLSTN1O94985 981 aa16.72■□□□□ 0.27
CHMP4A-207ENST00000533523 ADH1CP00326 375 aa16.72■□□□□ 0.27
CHMP4A-207ENST00000533523 MBL2P11226 248 aaPredicted RBP16.72■□□□□ 0.27
CHMP4A-207ENST00000533523 ADH5P11766 374 aa16.72■□□□□ 0.27
CHMP4A-207ENST00000533523 TIE1P35590 1138 aa16.72■□□□□ 0.27
CHMP4A-207ENST00000533523 TNNC1P63316 161 aa16.72■□□□□ 0.27
CHMP4A-207ENST00000533523 SLC7A9P82251 487 aa16.72■□□□□ 0.27
CHMP4A-207ENST00000533523 MESP2Q0VG99 397 aa16.72■□□□□ 0.27
CHMP4A-207ENST00000533523 DHCR24Q15392 516 aa16.72■□□□□ 0.27
CHMP4A-207ENST00000533523 BMT2Q1RMZ1 405 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms