RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 PAMP19021 973 aa12.69□□□□□ -0.38
BDNF-218ENST00000533246 TNFSF9P41273 254 aa12.69□□□□□ -0.38
BDNF-218ENST00000533246 DGKDQ16760 1214 aa12.69□□□□□ -0.38
BDNF-218ENST00000533246 ANO5Q75V66 913 aa12.69□□□□□ -0.38
BDNF-218ENST00000533246 MAP4K3Q8IVH8 894 aa12.69□□□□□ -0.38
BDNF-218ENST00000533246 GALNT15Q8N3T1 639 aa12.69□□□□□ -0.38
BDNF-218ENST00000533246 EXD1Q8NHP7 514 aa12.69□□□□□ -0.38
BDNF-218ENST00000533246 DNAJC9Q8WXX5 260 aa12.69□□□□□ -0.38
BDNF-218ENST00000533246 SNTG2Q9NY99 539 aa12.69□□□□□ -0.38
BDNF-218ENST00000533246 CPA4Q9UI42 421 aa12.69□□□□□ -0.38
BDNF-218ENST00000533246 CARD8Q9Y2G2 431 aa12.69□□□□□ -0.38
BDNF-218ENST00000533246 PCDHA3Q9Y5H8 950 aa12.69□□□□□ -0.38
BDNF-218ENST00000533246 IQCA1LA6NCM1 817 aa12.69□□□□□ -0.38
BDNF-218ENST00000533246 CES3Q6UWW8 571 aa12.69□□□□□ -0.38
BDNF-218ENST00000533246 APTXQ7Z2E3 356 aaKnown RBP12.69□□□□□ -0.38
BDNF-218ENST00000533246 TTC8Q8TAM2 541 aa12.69□□□□□ -0.38
BDNF-218ENST00000533246 GFM2Q969S9 779 aaKnown RBP12.69□□□□□ -0.38
BDNF-218ENST00000533246 PAFAH2Q99487 392 aa12.69□□□□□ -0.38
BDNF-218ENST00000533246 SERPINI1Q99574 410 aa12.69□□□□□ -0.38
BDNF-218ENST00000533246 DCLK3Q9C098 648 aa12.69□□□□□ -0.38
BDNF-218ENST00000533246 GDF3Q9NR23 364 aa12.69□□□□□ -0.38
BDNF-218ENST00000533246 PCDHGA4Q9Y5G9 962 aa12.69□□□□□ -0.38
BDNF-218ENST00000533246 ATP8B3O60423 1300 aa12.69□□□□□ -0.38
BDNF-218ENST00000533246 CYP3A7-CYP3A51PA0A087WV96 503 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 PSTPIP1O43586 416 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 KCNA2P16389 499 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 CYP3A7P24462 503 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 MAGEA10P43363 369 aaPredicted RBP12.68□□□□□ -0.38
BDNF-218ENST00000533246 MYBPC2Q14324 1141 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 ITPRIPL1Q6GPH6 555 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 THOC7Q6I9Y2 204 aaKnown RBP12.68□□□□□ -0.38
BDNF-218ENST00000533246 LAYNQ6UX15 382 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 MIB1Q86YT6 1006 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 SEMA4DQ92854 862 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 E2F7Q96AV8 911 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 TMEM176AQ96HP8 235 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 ZC4H2Q9NQZ6 224 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 AFF4Q9UHB7 1163 aaKnown RBP12.68□□□□□ -0.38
BDNF-218ENST00000533246 ATRNO75882 1429 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 PIK3C2AO00443 1686 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 MAP1BP46821 2468 aaKnown RBP12.68□□□□□ -0.38
BDNF-218ENST00000533246 TRIM43BA6NCK2 446 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 NVLO15381 856 aaKnown RBP12.68□□□□□ -0.38
BDNF-218ENST00000533246 TAC1P20366 129 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 HNRNPH3P31942 346 aaKnown RBP12.68□□□□□ -0.38
BDNF-218ENST00000533246 STIP1P31948 543 aaKnown RBP12.68□□□□□ -0.38
BDNF-218ENST00000533246 GLRBP48167 497 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 FSCBQ5H9T9 825 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 ANKRD20A2Q5SQ80 823 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 FAM182AQ5T1J6 154 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 ANKRD20A1Q5TYW2 823 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 NOTUMQ6P988 496 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 DDIASQ8IXT1 998 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 SLC16A10Q8TF71 515 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 PRDM5Q9NQX1 630 aaPredicted RBP12.68□□□□□ -0.38
BDNF-218ENST00000533246 ABI2Q9NYB9 513 aaPredicted RBP12.68□□□□□ -0.38
BDNF-218ENST00000533246 HACD3Q9P035 362 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 TSPAN16Q9UKR8 245 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 NR2E1Q9Y466 385 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 NFAT5O94916 1531 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 SDK1Q7Z5N4 2213 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 ARHGEF37A1IGU5 675 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 CELF2O95319 508 aaKnown RBP12.68□□□□□ -0.38
BDNF-218ENST00000533246 UBTFL6P0CB48 400 aaPredicted RBP12.68□□□□□ -0.38
BDNF-218ENST00000533246 ZCCHC18P0CG32 403 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 ATICP31939 592 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 PTGER2P43116 358 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 GCNT1Q02742 428 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 PKN2Q16513 984 aaKnown RBP12.68□□□□□ -0.38
BDNF-218ENST00000533246 C9orf131Q5VYM1 1079 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 SPATA2LQ8IUW3 424 aaPredicted RBP12.68□□□□□ -0.38
BDNF-218ENST00000533246 EFHBQ8N7U6 833 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 EDEM1Q92611 657 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 PTPRN2Q92932 1015 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 EIF2AQ9BY44 585 aaKnown RBP12.68□□□□□ -0.38
BDNF-218ENST00000533246 NDE1Q9NXR1 346 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 WHRNQ9P202 907 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 MRC1P22897 1456 aa12.68□□□□□ -0.38
BDNF-218ENST00000533246 ZSCAN9O15535 394 aaPredicted RBP12.67□□□□□ -0.38
BDNF-218ENST00000533246 CCDC22O60826 627 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 ZC3H11AO75152 810 aaKnown RBP eCLIP12.67□□□□□ -0.38
BDNF-218ENST00000533246 UBA1P22314 1058 aaKnown RBP12.67□□□□□ -0.38
BDNF-218ENST00000533246 GSTT1P30711 240 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 ELK3P41970 407 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 OR1G1P47890 313 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 C15orf59Q2T9L4 293 aaPredicted RBP12.67□□□□□ -0.38
BDNF-218ENST00000533246 NLRP9Q7RTR0 991 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 UBE2Q1Q7Z7E8 422 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 TMA16Q96EY4 203 aaKnown RBP12.67□□□□□ -0.38
BDNF-218ENST00000533246 EFHD1Q9BUP0 239 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 FAM129AQ9BZQ8 928 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 VAV3Q9UKW4 847 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 SH3GLB1Q9Y371 365 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 DPPA5A6NC42 116 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 USP12O75317 370 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 MT-CO1P00395 513 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 APOEP02649 317 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 GLRA2P23416 452 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 FMO1Q01740 532 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 ZNF235Q14590 738 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms