RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 OLFM2O95897 454 aa18.89■□□□□ 0.61
PCF11-206ENST00000533018 CYP17A1P05093 508 aa18.89■□□□□ 0.61
PCF11-206ENST00000533018 TRIM21P19474 475 aaKnown RBP18.89■□□□□ 0.61
PCF11-206ENST00000533018 KCNA4P22459 653 aa18.89■□□□□ 0.61
PCF11-206ENST00000533018 OPRD1P41143 372 aa18.89■□□□□ 0.61
PCF11-206ENST00000533018 PIK3CAP42336 1068 aa18.89■□□□□ 0.61
PCF11-206ENST00000533018 NDST1P52848 882 aa18.89■□□□□ 0.61
PCF11-206ENST00000533018 SLC5A3P53794 718 aa18.89■□□□□ 0.61
PCF11-206ENST00000533018 ZACNQ401N2 412 aa18.89■□□□□ 0.61
PCF11-206ENST00000533018 HECTD3Q5T447 861 aa18.89■□□□□ 0.61
PCF11-206ENST00000533018 SV2AQ7L0J3 742 aa18.89■□□□□ 0.61
PCF11-206ENST00000533018 TSTD1Q8NFU3 115 aa18.89■□□□□ 0.61
PCF11-206ENST00000533018 OVCA2Q8WZ82 227 aa18.89■□□□□ 0.61
PCF11-206ENST00000533018 LOXL4Q96JB6 756 aa18.89■□□□□ 0.61
PCF11-206ENST00000533018 KRT82Q9NSB4 513 aa18.89■□□□□ 0.61
PCF11-206ENST00000533018 MAPK8IP1Q9UQF2 711 aa18.89■□□□□ 0.61
PCF11-206ENST00000533018 HPSEQ9Y251 543 aa18.89■□□□□ 0.61
PCF11-206ENST00000533018 K7EQS6 105 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 SLC30A4O14863 429 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 COCHO43405 550 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 AKAP3O75969 853 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 EPN2O95208 641 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 ADH1CP00326 375 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 CCDC130P13994 396 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 GBP1P32455 592 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 SLC6A11P48066 632 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 NDUFA8P51970 172 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 SF3A2Q15428 464 aaKnown RBP18.88■□□□□ 0.61
PCF11-206ENST00000533018 ELF2Q15723 593 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 SPOPLQ6IQ16 392 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 PAQR9Q6ZVX9 377 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 FUKQ8N0W3 1084 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 CCDC33Q8N5R6 958 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 SLC2A14Q8TDB8 520 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 TMC2Q8TDI7 906 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 TAF4BQ92750 862 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 CCSER2Q9H7U1 834 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 MMRN2Q9H8L6 949 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 FAM49BQ9NUQ9 324 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 GMIPQ9P107 970 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 TBC1D14Q9P2M4 693 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 SH3BP1Q9Y3L3 701 aa18.88■□□□□ 0.61
PCF11-206ENST00000533018 IKBKBO14920 756 aa18.87■□□□□ 0.61
PCF11-206ENST00000533018 DCLK1O15075 740 aa18.87■□□□□ 0.61
PCF11-206ENST00000533018 PRR29P0C7W0 189 aa18.87■□□□□ 0.61
PCF11-206ENST00000533018 ADH5P11766 374 aa18.87■□□□□ 0.61
PCF11-206ENST00000533018 VAMP7P51809 220 aa18.87■□□□□ 0.61
PCF11-206ENST00000533018 MAP3K7CLP57077 242 aa18.87■□□□□ 0.61
PCF11-206ENST00000533018 PLK5Q496M5 336 aa18.87■□□□□ 0.61
PCF11-206ENST00000533018 RHBDF2Q6PJF5 856 aa18.87■□□□□ 0.61
PCF11-206ENST00000533018 KIAA1958Q8N8K9 716 aa18.87■□□□□ 0.61
PCF11-206ENST00000533018 USP33Q8TEY7 942 aa18.87■□□□□ 0.61
PCF11-206ENST00000533018 TMEM174Q8WUU8 243 aa18.87■□□□□ 0.61
PCF11-206ENST00000533018 ZC3H10Q96K80 434 aaKnown RBP18.87■□□□□ 0.61
PCF11-206ENST00000533018 PNKPQ96T60 521 aa18.87■□□□□ 0.61
PCF11-206ENST00000533018 TPSD1Q9BZJ3 242 aa18.87■□□□□ 0.61
PCF11-206ENST00000533018 IMPG2Q9BZV3 1241 aa18.87■□□□□ 0.61
PCF11-206ENST00000533018 HMGXB4Q9UGU5 601 aa18.87■□□□□ 0.61
PCF11-206ENST00000533018 INVSQ9Y283 1065 aa18.87■□□□□ 0.61
PCF11-206ENST00000533018 ATP6V1DQ9Y5K8 247 aa18.87■□□□□ 0.61
PCF11-206ENST00000533018 ABCA7Q8IZY2 2146 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 E2F8A0AVK6 867 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 ANTXRLA6NF34 631 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 TNFRSF10BO14763 440 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 RHOBTB1O94844 696 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 HLA-DRAP01903 254 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 APODP05090 189 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 ZNF806P0C7X5 589 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 IRF1P10914 325 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 KRT13P13646 458 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 NR2F2P24468 414 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 ADORA2BP29275 332 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 KDSRQ06136 332 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 GAB4Q2WGN9 574 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 IL31Q6EBC2 164 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 ANO7Q6IWH7 933 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 UNC93AQ86WB7 457 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 C12orf29Q8N999 325 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 JAKMIP2Q96AA8 810 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 DUSP15Q9H1R2 295 aaPredicted RBP18.86■□□□□ 0.61
PCF11-206ENST00000533018 SMOC1Q9H4F8 434 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 FBXO44Q9H4M3 255 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 COMMD8Q9NX08 183 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 EBF1Q9UH73 591 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 CIZ1Q9ULV3 898 aaPredicted RBP18.86■□□□□ 0.61
PCF11-206ENST00000533018 TRAF3IP3Q9Y228 551 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 ZDHHC9Q9Y397 364 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 CNOT1A5YKK6 2376 aaKnown RBP18.86■□□□□ 0.61
PCF11-206ENST00000533018 THADAQ6YHU6 1953 aa18.86■□□□□ 0.61
PCF11-206ENST00000533018 MYO18AQ92614 2054 aaKnown RBP18.85■□□□□ 0.61
PCF11-206ENST00000533018 BEST1O76090 585 aa18.85■□□□□ 0.61
PCF11-206ENST00000533018 RHOBTB3O94955 611 aa18.85■□□□□ 0.61
PCF11-206ENST00000533018 KAT7O95251 611 aa18.85■□□□□ 0.61
PCF11-206ENST00000533018 ASS1P00966 412 aaKnown RBP18.85■□□□□ 0.61
PCF11-206ENST00000533018 FAM200BP0CF97 657 aa18.85■□□□□ 0.61
PCF11-206ENST00000533018 TRIM49P0CI25 452 aa18.85■□□□□ 0.61
PCF11-206ENST00000533018 TRIM49CP0CI26 452 aa18.85■□□□□ 0.61
PCF11-206ENST00000533018 RPL13P26373 211 aaKnown RBP18.85■□□□□ 0.61
PCF11-206ENST00000533018 TIE1P35590 1138 aa18.85■□□□□ 0.61
PCF11-206ENST00000533018 MPLP40238 635 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms