RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 H0Y858 1186 aa16.23■□□□□ 0.19
CPSF1-210ENST00000532935 NCAM2O15394 837 aa16.23■□□□□ 0.19
CPSF1-210ENST00000532935 ZDHHC11BP0C7U3 371 aa16.23■□□□□ 0.19
CPSF1-210ENST00000532935 ACO1P21399 889 aaKnown RBP16.23■□□□□ 0.19
CPSF1-210ENST00000532935 CTHP32929 405 aa16.23■□□□□ 0.19
CPSF1-210ENST00000532935 MAGEA9P43362 315 aa16.23■□□□□ 0.19
CPSF1-210ENST00000532935 ZXDBP98169 803 aa16.23■□□□□ 0.19
CPSF1-210ENST00000532935 RUNX3Q13761 415 aa16.23■□□□□ 0.19
CPSF1-210ENST00000532935 PDGFRLQ15198 375 aa16.23■□□□□ 0.19
CPSF1-210ENST00000532935 HECTD3Q5T447 861 aa16.23■□□□□ 0.19
CPSF1-210ENST00000532935 C1orf228Q6PIY5 440 aa16.23■□□□□ 0.19
CPSF1-210ENST00000532935 RALGPS2Q86X27 583 aaPredicted RBP16.23■□□□□ 0.19
CPSF1-210ENST00000532935 ARHGEF19Q8IW93 802 aa16.23■□□□□ 0.19
CPSF1-210ENST00000532935 ZNF687Q8N1G0 1237 aa16.23■□□□□ 0.19
CPSF1-210ENST00000532935 OSCP1Q8WVF1 389 aa16.23■□□□□ 0.19
CPSF1-210ENST00000532935 KAT5Q92993 513 aa16.23■□□□□ 0.19
CPSF1-210ENST00000532935 CLDN23Q96B33 292 aa16.23■□□□□ 0.19
CPSF1-210ENST00000532935 INTS2Q9H0H0 1204 aaKnown RBP16.23■□□□□ 0.19
CPSF1-210ENST00000532935 IRF2BPLQ9H1B7 796 aa16.23■□□□□ 0.19
CPSF1-210ENST00000532935 EBF3Q9H4W6 596 aa16.23■□□□□ 0.19
CPSF1-210ENST00000532935 THAP9Q9H5L6 903 aa16.23■□□□□ 0.19
CPSF1-210ENST00000532935 DUS2Q9NX74 493 aaKnown RBP16.23■□□□□ 0.19
CPSF1-210ENST00000532935 SCML2Q9UQR0 700 aa16.23■□□□□ 0.19
CPSF1-210ENST00000532935 LEFTY2O00292 366 aa16.22■□□□□ 0.19
CPSF1-210ENST00000532935 COCHO43405 550 aa16.22■□□□□ 0.19
CPSF1-210ENST00000532935 ARSAP15289 507 aa16.22■□□□□ 0.19
CPSF1-210ENST00000532935 CD19P15391 556 aa16.22■□□□□ 0.19
CPSF1-210ENST00000532935 MTIF2P46199 727 aaKnown RBP16.22■□□□□ 0.19
CPSF1-210ENST00000532935 PGFP49763 221 aa16.22■□□□□ 0.19
CPSF1-210ENST00000532935 TUBP50607 506 aa16.22■□□□□ 0.19
CPSF1-210ENST00000532935 GCNT1Q02742 428 aa16.22■□□□□ 0.19
CPSF1-210ENST00000532935 FZD5Q13467 585 aa16.22■□□□□ 0.19
CPSF1-210ENST00000532935 ANGPT1Q15389 498 aa16.22■□□□□ 0.19
CPSF1-210ENST00000532935 SGO2Q562F6 1265 aa16.22■□□□□ 0.19
CPSF1-210ENST00000532935 CT47A1Q5JQC4 288 aaPredicted RBP16.22■□□□□ 0.19
CPSF1-210ENST00000532935 TMEM270Q6UE05 265 aa16.22■□□□□ 0.19
CPSF1-210ENST00000532935 RBM43Q6ZSC3 357 aaKnown RBP16.22■□□□□ 0.19
CPSF1-210ENST00000532935 RRAGAQ7L523 313 aa16.22■□□□□ 0.19
CPSF1-210ENST00000532935 ANKRD52Q8NB46 1076 aa16.22■□□□□ 0.19
CPSF1-210ENST00000532935 CCSER2Q9H7U1 834 aa16.22■□□□□ 0.19
CPSF1-210ENST00000532935 TLR8Q9NR97 1041 aaKnown RBP16.22■□□□□ 0.19
CPSF1-210ENST00000532935 SMPD4Q9NXE4 827 aa16.22■□□□□ 0.19
CPSF1-210ENST00000532935 PCDHB4Q9Y5E5 795 aa16.22■□□□□ 0.19
CPSF1-210ENST00000532935 CPQQ9Y646 472 aa16.22■□□□□ 0.19
CPSF1-210ENST00000532935 WNT6Q9Y6F9 365 aa16.22■□□□□ 0.19
CPSF1-210ENST00000532935 FANCMQ8IYD8 2048 aa16.21■□□□□ 0.19
CPSF1-210ENST00000532935 USP34Q70CQ2 3546 aa16.21■□□□□ 0.19
CPSF1-210ENST00000532935 OTOL1A6NHN0 477 aaPredicted RBP16.21■□□□□ 0.19
CPSF1-210ENST00000532935 CYP26A1O43174 497 aa16.21■□□□□ 0.19
CPSF1-210ENST00000532935 MBD3O95983 291 aa16.21■□□□□ 0.19
CPSF1-210ENST00000532935 PAEPP09466 180 aa16.21■□□□□ 0.19
CPSF1-210ENST00000532935 MBL2P11226 248 aaPredicted RBP16.21■□□□□ 0.19
CPSF1-210ENST00000532935 VDRP11473 427 aa16.21■□□□□ 0.19
CPSF1-210ENST00000532935 RPS9P46781 194 aaKnown RBP16.21■□□□□ 0.19
CPSF1-210ENST00000532935 IFNAR2P48551 515 aa16.21■□□□□ 0.19
CPSF1-210ENST00000532935 KIF11P52732 1056 aa16.21■□□□□ 0.19
CPSF1-210ENST00000532935 SLC8A3P57103 927 aa16.21■□□□□ 0.19
CPSF1-210ENST00000532935 GOLGA7BQ2TAP0 167 aa16.21■□□□□ 0.19
CPSF1-210ENST00000532935 TXNDC11Q6PKC3 985 aa16.21■□□□□ 0.19
CPSF1-210ENST00000532935 TTC30AQ86WT1 665 aa16.21■□□□□ 0.19
CPSF1-210ENST00000532935 FAM114A1Q8IWE2 563 aa16.21■□□□□ 0.19
CPSF1-210ENST00000532935 ATOH1Q92858 354 aaPredicted RBP16.21■□□□□ 0.19
CPSF1-210ENST00000532935 ATP2A3Q93084 1043 aa16.21■□□□□ 0.19
CPSF1-210ENST00000532935 KREMEN1Q96MU8 473 aa16.21■□□□□ 0.19
CPSF1-210ENST00000532935 CRACR2AQ9BSW2 395 aa16.21■□□□□ 0.19
CPSF1-210ENST00000532935 UBXN6Q9BZV1 441 aa16.21■□□□□ 0.19
CPSF1-210ENST00000532935 TSPAN16Q9UKR8 245 aa16.21■□□□□ 0.19
CPSF1-210ENST00000532935 KIAA1257Q9ULG3 409 aa16.21■□□□□ 0.19
CPSF1-210ENST00000532935 ATG2BQ96BY7 2078 aa16.21■□□□□ 0.19
CPSF1-210ENST00000532935 RNF225M0QZC1 329 aaPredicted RBP16.2■□□□□ 0.18
CPSF1-210ENST00000532935 TLR5O60602 858 aa16.2■□□□□ 0.18
CPSF1-210ENST00000532935 BCAT1P54687 386 aa16.2■□□□□ 0.18
CPSF1-210ENST00000532935 EML3Q32P44 896 aa16.2■□□□□ 0.18
CPSF1-210ENST00000532935 TRIM65Q6PJ69 517 aa16.2■□□□□ 0.18
CPSF1-210ENST00000532935 GBP6Q6ZN66 633 aa16.2■□□□□ 0.18
CPSF1-210ENST00000532935 CCDC186Q7Z3E2 898 aa16.2■□□□□ 0.18
CPSF1-210ENST00000532935 DDX42Q86XP3 938 aaKnown RBP eCLIP16.2■□□□□ 0.18
CPSF1-210ENST00000532935 C1orf210Q8IVY1 113 aa16.2■□□□□ 0.18
CPSF1-210ENST00000532935 CPA6Q8N4T0 437 aa16.2■□□□□ 0.18
CPSF1-210ENST00000532935 KIAA1958Q8N8K9 716 aa16.2■□□□□ 0.18
CPSF1-210ENST00000532935 RBBP8NLQ8NC74 664 aaPredicted RBP16.2■□□□□ 0.18
CPSF1-210ENST00000532935 LMAN1LQ9HAT1 526 aa16.2■□□□□ 0.18
CPSF1-210ENST00000532935 FAM86C1Q9NVL1 165 aa16.2■□□□□ 0.18
CPSF1-210ENST00000532935 SPATA6Q9NWH7 488 aaPredicted RBP16.2■□□□□ 0.18
CPSF1-210ENST00000532935 HESX1Q9UBX0 185 aa16.2■□□□□ 0.18
CPSF1-210ENST00000532935 USP3Q9Y6I4 520 aa16.2■□□□□ 0.18
CPSF1-210ENST00000532935 KIAA1549LQ6ZVL6 1849 aa16.19■□□□□ 0.18
CPSF1-210ENST00000532935 A0A1W2PQH9 124 aa16.19■□□□□ 0.18
CPSF1-210ENST00000532935 GTPBP10A4D1E9 387 aaKnown RBP16.19■□□□□ 0.18
CPSF1-210ENST00000532935 O00370 1275 aa16.19■□□□□ 0.18
CPSF1-210ENST00000532935 CHRNB1P11230 501 aa16.19■□□□□ 0.18
CPSF1-210ENST00000532935 PDE4CQ08493 712 aa16.19■□□□□ 0.18
CPSF1-210ENST00000532935 BST2Q10589 180 aaKnown RBP16.19■□□□□ 0.18
CPSF1-210ENST00000532935 PON2Q15165 354 aa16.19■□□□□ 0.18
CPSF1-210ENST00000532935 MAN2A1Q16706 1144 aa16.19■□□□□ 0.18
CPSF1-210ENST00000532935 HSP90AA4PQ58FG1 418 aa16.19■□□□□ 0.18
CPSF1-210ENST00000532935 RAB41Q5JT25 222 aa16.19■□□□□ 0.18
CPSF1-210ENST00000532935 LCLAT1Q6UWP7 414 aa16.19■□□□□ 0.18
CPSF1-210ENST00000532935 PIGZQ86VD9 579 aa16.19■□□□□ 0.18
CPSF1-210ENST00000532935 TFAP2BQ92481 460 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms