RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 C3orf62Q6ZUJ4 267 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 MCPH1Q8NEM0 835 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 S100PBPQ96BU1 408 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 UGT2B28Q9BY64 529 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 ZNF221Q9UK13 617 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 TEX14Q8IWB6 1497 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 WRBO00258 174 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 LIN7AO14910 233 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-231ENST00000532463 HS6ST1O60243 411 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 DSG3P32926 999 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 GCLMP48507 274 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 PEX3P56589 373 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 PACS1Q6VY07 963 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 FAM220AQ7Z4H9 259 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 SPPL2AQ8TCT8 520 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 OSBPL5Q9H0X9 879 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-231ENST00000532463 INTS10Q9NVR2 710 aaKnown RBP8.37□□□□□ -1.07
CTNND1-231ENST00000532463 SNX12Q9UMY4 172 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 PTPRKQ15262 1439 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 PCDH11XQ9BZA7 1347 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 ZMYM3Q14202 1370 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 C2orf71A6NGG8 1288 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 H0YIN7 160 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 KATNA1O75449 491 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 SUPT7LO94864 414 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 CPSF4O95639 269 aaKnown RBP8.37□□□□□ -1.07
CTNND1-231ENST00000532463 ALDH1A1P00352 501 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 GP5P40197 560 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 CEBPAP49715 358 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-231ENST00000532463 GEMIN4P57678 1058 aaKnown RBP8.37□□□□□ -1.07
CTNND1-231ENST00000532463 UBXN2AP68543 259 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 KCNH2Q12809 1159 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 DRAP1Q14919 205 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-231ENST00000532463 PSMD5Q16401 504 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 PFKFB3Q16875 520 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-231ENST00000532463 PGS1Q32NB8 556 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 MFSD14BQ5SR56 506 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 HPS6Q86YV9 775 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 GLYCTKQ8IVS8 523 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 FAM20CQ8IXL6 584 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 EMC1Q8N766 993 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 PLEKHG4BQ96PX9 1271 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 EYA1Q99502 592 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 ADAM33Q9BZ11 813 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 MCUBQ9NWR8 336 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 COMMD3-BMI1R4GMX3 469 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 ZMYM4Q5VZL5 1548 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 PIK3C2GO75747 1445 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 GAS2O43903 313 aaKnown RBP8.37□□□□□ -1.07
CTNND1-231ENST00000532463 BMP10O95393 424 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 MMP1P03956 469 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 ITIH1P19827 911 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 MAGEA12P43365 314 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 ROR2Q01974 943 aaKnown RBP8.37□□□□□ -1.07
CTNND1-231ENST00000532463 MAPK6Q16659 721 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 SEL1L3Q68CR1 1132 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 CXXC5Q7LFL8 322 aaKnown RBP8.37□□□□□ -1.07
CTNND1-231ENST00000532463 DDX53Q86TM3 631 aaKnown RBP8.37□□□□□ -1.07
CTNND1-231ENST00000532463 COL23A1Q86Y22 540 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-231ENST00000532463 YAF2Q8IY57 180 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 HS6ST3Q8IZP7 471 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 SPIRE2Q8WWL2 714 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 AKAP1Q92667 903 aaKnown RBP eCLIP8.37□□□□□ -1.077e-7■□□□□ 11.3
CTNND1-231ENST00000532463 VPS35Q96QK1 796 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 YME1L1Q96TA2 773 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 RIBC2Q9H4K1 309 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 ANTXR1Q9H6X2 564 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 PIDD1Q9HB75 910 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 SLC39A10Q9ULF5 831 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 MAPRE3Q9UPY8 281 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 HBS1LQ9Y450 684 aaKnown RBP8.37□□□□□ -1.07
CTNND1-231ENST00000532463 USP19O94966 1318 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 GNPATO15228 680 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 NOS1APO75052 506 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-231ENST00000532463 EPN2O95208 641 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 GSTT1P30711 240 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 AP3M2P53677 418 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 TGM3Q08188 693 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 XRCC4Q13426 336 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 INO80DQ53TQ3 878 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-231ENST00000532463 OTUD3Q5T2D3 398 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-231ENST00000532463 AADACL4Q5VUY2 407 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 R3HCC1LQ7Z5L2 792 aaKnown RBP8.37□□□□□ -1.07
CTNND1-231ENST00000532463 ZNF280BQ86YH2 543 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 LRRC34Q8IZ02 419 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 RTKN2Q8IZC4 609 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 FSTL5Q8N475 847 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-231ENST00000532463 URGCPQ8TCY9 931 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 FAM167AQ96KS9 214 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 TEKT5Q96M29 485 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 DGCR6LQ9BY27 220 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 PRKD2Q9BZL6 878 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 KLHL11Q9NVR0 708 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 TMCO1Q9UM00 188 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 EFR3BQ9Y2G0 817 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 PPIP5K1Q6PFW1 1433 aa8.37□□□□□ -1.07
CTNND1-231ENST00000532463 IQCMA0A1B0GVH7 501 aa8.36□□□□□ -1.07
CTNND1-231ENST00000532463 NR5A2O00482 541 aa8.36□□□□□ -1.07
CTNND1-231ENST00000532463 GSTM5P46439 218 aa8.36□□□□□ -1.07
CTNND1-231ENST00000532463 ACAP2Q15057 778 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms