RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 ADGRD1Q6QNK2 874 aa12.85□□□□□ -0.35
CHD7-211ENST00000532149 ZDHHC24Q6UX98 284 aa12.85□□□□□ -0.35
CHD7-211ENST00000532149 FAM183BPQ6ZVS7 135 aa12.85□□□□□ -0.35
CHD7-211ENST00000532149 TTC30AQ86WT1 665 aa12.85□□□□□ -0.35
CHD7-211ENST00000532149 ZDHHC14Q8IZN3 488 aa12.85□□□□□ -0.35
CHD7-211ENST00000532149 THEM5Q8N1Q8 247 aa12.85□□□□□ -0.35
CHD7-211ENST00000532149 RIBC1Q8N443 379 aaPredicted RBP12.85□□□□□ -0.35
CHD7-211ENST00000532149 SLC43A3Q8NBI5 491 aa12.85□□□□□ -0.35
CHD7-211ENST00000532149 UBA3Q8TBC4 463 aa12.85□□□□□ -0.35
CHD7-211ENST00000532149 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.85□□□□□ -0.35
CHD7-211ENST00000532149 C1orf54Q8WWF1 131 aa12.85□□□□□ -0.35
CHD7-211ENST00000532149 IRGQQ8WZA9 623 aa12.85□□□□□ -0.35
CHD7-211ENST00000532149 LENG1Q96BZ8 264 aaPredicted RBP12.85□□□□□ -0.35
CHD7-211ENST00000532149 ACBD6Q9BR61 282 aa12.85□□□□□ -0.35
CHD7-211ENST00000532149 DDX23Q9BUQ8 820 aaKnown RBP12.85□□□□□ -0.35
CHD7-211ENST00000532149 OXCT2Q9BYC2 517 aaPredicted RBP12.85□□□□□ -0.35
CHD7-211ENST00000532149 HMX1Q9NP08 348 aaPredicted RBP12.85□□□□□ -0.35
CHD7-211ENST00000532149 CNGB3Q9NQW8 809 aa12.85□□□□□ -0.35
CHD7-211ENST00000532149 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.85□□□□□ -0.35
CHD7-211ENST00000532149 CWC15Q9P013 229 aaKnown RBP12.85□□□□□ -0.35
CHD7-211ENST00000532149 HMGXB4Q9UGU5 601 aa12.85□□□□□ -0.35
CHD7-211ENST00000532149 PADI3Q9ULW8 664 aa12.85□□□□□ -0.35
CHD7-211ENST00000532149 RAD54BQ9Y620 910 aa12.85□□□□□ -0.35
CHD7-211ENST00000532149 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.84□□□□□ -0.35
CHD7-211ENST00000532149 TCRBV7S2A1N4TA0A589 114 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 CARNS1A5YM72 827 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 MYADML2A6NDP7 307 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 C3orf70A6NLC5 250 aaPredicted RBP12.84□□□□□ -0.35
CHD7-211ENST00000532149 H0YGN5 161 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 TRAPPC3O43617 180 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 ABHD2P08910 425 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 FAM200BP0CF97 657 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 CAPN2P17655 700 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 TYMPP19971 482 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 KLRC2P26717 231 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 NOS2P35228 1153 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 MATKP42679 507 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 DMTNQ08495 405 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 NR1H3Q13133 447 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 TUSC3Q13454 348 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 BFSP2Q13515 415 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 GLRA4Q5JXX5 417 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 CEP85LQ5SZL2 805 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 AADACL2Q6P093 401 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 PMF1Q6P1K2 205 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 RHBDF2Q6PJF5 856 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 DSTYKQ6XUX3 929 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 KDM7AQ6ZMT4 941 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 TAOK1Q7L7X3 1001 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 DDX42Q86XP3 938 aaKnown RBP eCLIP12.84□□□□□ -0.35
CHD7-211ENST00000532149 ZCCHC9Q8N567 271 aaKnown RBP12.84□□□□□ -0.35
CHD7-211ENST00000532149 JOSD2Q8TAC2 188 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 PIK3R5Q8WYR1 880 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 SENP8Q96LD8 212 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 GDAP1L1Q96MZ0 367 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 SERPINB12Q96P63 405 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 HEMGNQ9BXL5 484 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 TRIM31Q9BZY9 425 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 ELAC1Q9H777 363 aaKnown RBP12.84□□□□□ -0.35
CHD7-211ENST00000532149 LRRC4Q9HBW1 653 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 RGS18Q9NS28 235 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 CHST7Q9NS84 486 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 TPX2Q9ULW0 747 aaKnown RBP12.84□□□□□ -0.35
CHD7-211ENST00000532149 ATP8A1Q9Y2Q0 1164 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 PTPN22Q9Y2R2 807 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 NFS1Q9Y697 457 aa12.84□□□□□ -0.35
CHD7-211ENST00000532149 TMEM189-UBE2V1I3L0A0 370 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 DNALI1O14645 258 aaPredicted RBP12.83□□□□□ -0.36
CHD7-211ENST00000532149 CST8O60676 142 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 SHOX2O60902 331 aaPredicted RBP12.83□□□□□ -0.36
CHD7-211ENST00000532149 AGTP01019 485 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 IVDP26440 423 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 APLP1P51693 650 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 FAM189BP81408 668 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 MRPS25P82663 173 aaKnown RBP12.83□□□□□ -0.36
CHD7-211ENST00000532149 KRT81Q14533 505 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 STAT4Q14765 748 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 RASA2Q15283 850 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 UPP1Q16831 310 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 SLC25A52Q3SY17 297 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 ERMARDQ5T6L9 678 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 SCARA3Q6AZY7 606 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 MFSD5Q6N075 450 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 HIBCHQ6NVY1 386 aaPredicted RBP12.83□□□□□ -0.36
CHD7-211ENST00000532149 SLC24A5Q71RS6 500 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 PDZD4Q76G19 769 aaPredicted RBP12.83□□□□□ -0.36
CHD7-211ENST00000532149 PHLDB2Q86SQ0 1253 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 C12orf29Q8N999 325 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 MYCBPAPQ8TBZ2 947 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 URGCPQ8TCY9 931 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 RSAD2Q8WXG1 361 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 RAPGEF5Q92565 580 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 P3H4Q92791 437 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 APBB2Q92870 758 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 SMARCD1Q96GM5 515 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 CFAP57Q96MR6 1250 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 RNF186Q9NXI6 227 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 KLK14Q9P0G3 267 aa12.83□□□□□ -0.36
CHD7-211ENST00000532149 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.83□□□□□ -0.36
CHD7-211ENST00000532149 FETUBQ9UGM5 382 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms