RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 TRNAU1APQ9NX07 287 aaKnown RBP4.04□□□□□ -1.76
ATM-217ENST00000531957 TFCP2L1Q9NZI6 479 aa4.04□□□□□ -1.76
ATM-217ENST00000531957 SCAF8Q9UPN6 1271 aaKnown RBP4.04□□□□□ -1.76
ATM-217ENST00000531957 FER1L4A9Z1Z3 1794 aa4.04□□□□□ -1.76
ATM-217ENST00000531957 PYCARD-AS1I3L0S3 204 aa4.03□□□□□ -1.76
ATM-217ENST00000531957 FCHO1O14526 889 aa4.03□□□□□ -1.76
ATM-217ENST00000531957 RASSF9O75901 435 aa4.03□□□□□ -1.76
ATM-217ENST00000531957 SCGB1D2O95969 90 aa4.03□□□□□ -1.76
ATM-217ENST00000531957 CHRM5P08912 532 aaPredicted RBP4.03□□□□□ -1.76
ATM-217ENST00000531957 MYCLP12524 364 aaPredicted RBP4.03□□□□□ -1.76
ATM-217ENST00000531957 HGFP14210 728 aa4.03□□□□□ -1.76
ATM-217ENST00000531957 BRAFP15056 766 aa4.03□□□□□ -1.76
ATM-217ENST00000531957 ATP5F1P24539 256 aaPredicted RBP4.03□□□□□ -1.76
ATM-217ENST00000531957 IL1R2P27930 398 aa4.03□□□□□ -1.76
ATM-217ENST00000531957 PRKAR1BP31321 381 aa4.03□□□□□ -1.76
ATM-217ENST00000531957 PTDSS1P48651 473 aaKnown RBP4.03□□□□□ -1.76
ATM-217ENST00000531957 DIO1P49895 249 aa4.03□□□□□ -1.76
ATM-217ENST00000531957 COPB1P53618 953 aaKnown RBP4.03□□□□□ -1.76
ATM-217ENST00000531957 BCAT1P54687 386 aa4.03□□□□□ -1.76
ATM-217ENST00000531957 MTHFD1LQ6UB35 978 aa4.03□□□□□ -1.76
ATM-217ENST00000531957 CRELD2Q6UXH1 353 aaPredicted RBP4.03□□□□□ -1.76
ATM-217ENST00000531957 PRSS3P2Q8NHM4 247 aa4.03□□□□□ -1.76
ATM-217ENST00000531957 PPP1R9BQ96SB3 815 aa4.03□□□□□ -1.76
ATM-217ENST00000531957 TMEM60Q9H2L4 133 aa4.03□□□□□ -1.76
ATM-217ENST00000531957 A1CFQ9NQ94 594 aaKnown RBP4.03□□□□□ -1.76
ATM-217ENST00000531957 TUBA8Q9NY65 449 aaPredicted RBP4.03□□□□□ -1.76
ATM-217ENST00000531957 DNMT3BQ9UBC3 853 aaKnown RBP4.03□□□□□ -1.76
ATM-217ENST00000531957 USP22Q9UPT9 525 aa4.03□□□□□ -1.76
ATM-217ENST00000531957 TRIM43BA6NCK2 446 aa4.02□□□□□ -1.77
ATM-217ENST00000531957 TMEM232C9JQI7 657 aa4.02□□□□□ -1.77
ATM-217ENST00000531957 E5RJQ4 531 aa4.02□□□□□ -1.77
ATM-217ENST00000531957 FAM227AF5H4B4 570 aa4.02□□□□□ -1.77
ATM-217ENST00000531957 SPRY2O43597 315 aa4.02□□□□□ -1.77
ATM-217ENST00000531957 RRP9O43818 475 aaKnown RBP4.02□□□□□ -1.77
ATM-217ENST00000531957 ZKSCAN1P17029 563 aaPredicted RBP4.02□□□□□ -1.77
ATM-217ENST00000531957 UQCRC1P31930 480 aa4.02□□□□□ -1.77
ATM-217ENST00000531957 MTHFSP49914 203 aa4.02□□□□□ -1.77
ATM-217ENST00000531957 SUMO2P61956 95 aaKnown RBP4.02□□□□□ -1.77
ATM-217ENST00000531957 PTCHD4Q6ZW05 846 aa4.02□□□□□ -1.77
ATM-217ENST00000531957 SFTPA1Q8IWL2 248 aa4.02□□□□□ -1.77
ATM-217ENST00000531957 KIAA0319LQ8IZA0 1049 aa4.02□□□□□ -1.77
ATM-217ENST00000531957 NANOGP1Q8N7R0 232 aa4.02□□□□□ -1.77
ATM-217ENST00000531957 ADAMTS18Q8TE60 1221 aa4.02□□□□□ -1.77
ATM-217ENST00000531957 WASF1Q92558 559 aa4.02□□□□□ -1.77
ATM-217ENST00000531957 TRIM43Q96BQ3 446 aaPredicted RBP4.02□□□□□ -1.77
ATM-217ENST00000531957 CTHRC1Q96CG8 243 aa4.02□□□□□ -1.77
ATM-217ENST00000531957 RSPRY1Q96DX4 576 aa4.02□□□□□ -1.77
ATM-217ENST00000531957 WDYHV1Q96HA8 205 aa4.02□□□□□ -1.77
ATM-217ENST00000531957 CCDC17Q96LX7 622 aa4.02□□□□□ -1.77
ATM-217ENST00000531957 FYTTD1Q96QD9 318 aaKnown RBP4.02□□□□□ -1.77
ATM-217ENST00000531957 FAM118BQ9BPY3 351 aa4.02□□□□□ -1.77
ATM-217ENST00000531957 VN1R3Q9BXE9 311 aa4.02□□□□□ -1.77
ATM-217ENST00000531957 ADGRE3Q9BY15 652 aa4.02□□□□□ -1.77
ATM-217ENST00000531957 HDAC9Q9UKV0 1011 aa4.02□□□□□ -1.77
ATM-217ENST00000531957 CNTNAP2Q9UHC6 1331 aa4.01□□□□□ -1.77
ATM-217ENST00000531957 LOC102723971A0A1B0GUV8 181 aa4.01□□□□□ -1.77
ATM-217ENST00000531957 MBD3L4A6NDZ8 208 aaPredicted RBP4.01□□□□□ -1.77
ATM-217ENST00000531957 MBD3L3A6NE82 208 aaPredicted RBP4.01□□□□□ -1.77
ATM-217ENST00000531957 AGPSO00116 658 aa4.01□□□□□ -1.77
ATM-217ENST00000531957 RAB27BO00194 218 aa4.01□□□□□ -1.77
ATM-217ENST00000531957 CD3EAPO15446 510 aaKnown RBP4.01□□□□□ -1.77
ATM-217ENST00000531957 MT-CO3P00414 261 aa4.01□□□□□ -1.77
ATM-217ENST00000531957 APEHP13798 732 aaKnown RBP4.01□□□□□ -1.77
ATM-217ENST00000531957 HOXD9P28356 352 aaPredicted RBP4.01□□□□□ -1.77
ATM-217ENST00000531957 NR4A2P43354 598 aa4.01□□□□□ -1.77
ATM-217ENST00000531957 RPS16P62249 146 aaKnown RBP4.01□□□□□ -1.77
ATM-217ENST00000531957 STK3Q13188 491 aa4.01□□□□□ -1.77
ATM-217ENST00000531957 SEC23BQ15437 767 aa4.01□□□□□ -1.77
ATM-217ENST00000531957 TRIP6Q15654 476 aaKnown RBP4.01□□□□□ -1.77
ATM-217ENST00000531957 ZNF260Q3ZCT1 412 aa4.01□□□□□ -1.77
ATM-217ENST00000531957 TMEM65Q6PI78 240 aa4.01□□□□□ -1.77
ATM-217ENST00000531957 SHC4Q6S5L8 630 aa4.01□□□□□ -1.77
ATM-217ENST00000531957 ZNF813Q6ZN06 617 aa4.01□□□□□ -1.77
ATM-217ENST00000531957 TECPR1Q7Z6L1 1165 aa4.01□□□□□ -1.77
ATM-217ENST00000531957 MAFAQ8NHW3 353 aaPredicted RBP4.01□□□□□ -1.77
ATM-217ENST00000531957 SUCLG2Q96I99 432 aa4.01□□□□□ -1.77
ATM-217ENST00000531957 TRIM5Q9C035 493 aa4.01□□□□□ -1.77
ATM-217ENST00000531957 XPNPEP3Q9NQH7 507 aa4.01□□□□□ -1.77
ATM-217ENST00000531957 DDX20Q9UHI6 824 aaKnown RBP4.01□□□□□ -1.77
ATM-217ENST00000531957 TPCN1Q9ULQ1 816 aa4.01□□□□□ -1.77
ATM-217ENST00000531957 AFG3L2Q9Y4W6 797 aa4.01□□□□□ -1.77
ATM-217ENST00000531957 EXOC5O00471 708 aa4□□□□□ -1.77
ATM-217ENST00000531957 DSCR3O14972 297 aa4□□□□□ -1.77
ATM-217ENST00000531957 MARCH6O60337 910 aa4□□□□□ -1.77
ATM-217ENST00000531957 PIAS2O75928 621 aa4□□□□□ -1.77
ATM-217ENST00000531957 CYP19A1P11511 503 aaPredicted RBP4□□□□□ -1.77
ATM-217ENST00000531957 CREB1P16220 341 aa4□□□□□ -1.77
ATM-217ENST00000531957 KLRC1P26715 233 aa4□□□□□ -1.77
ATM-217ENST00000531957 EPHA3P29320 983 aa4□□□□□ -1.77
ATM-217ENST00000531957 NTSR1P30989 418 aa4□□□□□ -1.77
ATM-217ENST00000531957 PGDP52209 483 aa4□□□□□ -1.77
ATM-217ENST00000531957 TIRAPP58753 221 aa4□□□□□ -1.77
ATM-217ENST00000531957 FHL1Q13642 323 aa4□□□□□ -1.77
ATM-217ENST00000531957 PPP2R5AQ15172 486 aa4□□□□□ -1.77
ATM-217ENST00000531957 CNGA2Q16280 664 aa4□□□□□ -1.77
ATM-217ENST00000531957 INSCQ1MX18 579 aa4□□□□□ -1.77
ATM-217ENST00000531957 PLEKHG6Q3KR16 790 aa4□□□□□ -1.77
ATM-217ENST00000531957 ARHGAP29Q52LW3 1261 aa4□□□□□ -1.77
ATM-217ENST00000531957 KLHL22Q53GT1 634 aa4□□□□□ -1.77
ATM-217ENST00000531957 FAM102BQ5T8I3 360 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms