RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 USP46P62068 366 aa20.02■□□□□ 0.8
SMPD1-205ENST00000531303 RBM10P98175 930 aaKnown RBP20.02■□□□□ 0.8
SMPD1-205ENST00000531303 SLC6A3Q01959 620 aa20.02■□□□□ 0.8
SMPD1-205ENST00000531303 MAMLD1Q13495 774 aa20.02■□□□□ 0.8
SMPD1-205ENST00000531303 TAF5Q15542 800 aa20.02■□□□□ 0.8
SMPD1-205ENST00000531303 TAF12Q16514 161 aa20.02■□□□□ 0.8
SMPD1-205ENST00000531303 CCDC149Q6ZUS6 474 aa20.02■□□□□ 0.8
SMPD1-205ENST00000531303 ZSCAN30Q86W11 494 aa20.02■□□□□ 0.8
SMPD1-205ENST00000531303 SLC22A17Q8WUG5 538 aa20.02■□□□□ 0.8
SMPD1-205ENST00000531303 SPATA17Q96L03 361 aa20.02■□□□□ 0.8
SMPD1-205ENST00000531303 FAM161BQ96MY7 647 aa20.02■□□□□ 0.8
SMPD1-205ENST00000531303 SELENOOQ9BVL4 669 aa20.02■□□□□ 0.8
SMPD1-205ENST00000531303 OSGEPQ9NPF4 335 aa20.02■□□□□ 0.8
SMPD1-205ENST00000531303 MAN1C1Q9NR34 630 aa20.02■□□□□ 0.8
SMPD1-205ENST00000531303 METTL5Q9NRN9 209 aaKnown RBP20.02■□□□□ 0.8
SMPD1-205ENST00000531303 PARVAQ9NVD7 372 aa20.02■□□□□ 0.8
SMPD1-205ENST00000531303 WDR35Q9P2L0 1181 aa20.02■□□□□ 0.8
SMPD1-205ENST00000531303 SALL4Q9UJQ4 1053 aa20.02■□□□□ 0.8
SMPD1-205ENST00000531303 NCANO14594 1321 aa20.01■□□□□ 0.79
SMPD1-205ENST00000531303 CCP110O43303 1012 aa20.01■□□□□ 0.79
SMPD1-205ENST00000531303 KRT86O43790 486 aa20.01■□□□□ 0.79
SMPD1-205ENST00000531303 ZBED1O96006 694 aa20.01■□□□□ 0.79
SMPD1-205ENST00000531303 EPHB3P54753 998 aa20.01■□□□□ 0.79
SMPD1-205ENST00000531303 GRIN2CQ14957 1233 aa20.01■□□□□ 0.79
SMPD1-205ENST00000531303 PLEKHA7Q6IQ23 1121 aa20.01■□□□□ 0.79
SMPD1-205ENST00000531303 OLFML1Q6UWY5 402 aa20.01■□□□□ 0.79
SMPD1-205ENST00000531303 DENND5BQ6ZUT9 1274 aa20.01■□□□□ 0.79
SMPD1-205ENST00000531303 RFFLQ8WZ73 363 aa20.01■□□□□ 0.79
SMPD1-205ENST00000531303 MCRS1Q96EZ8 462 aa20.01■□□□□ 0.79
SMPD1-205ENST00000531303 TSGA10Q9BZW7 698 aa20.01■□□□□ 0.79
SMPD1-205ENST00000531303 AVENQ9NQS1 362 aaPredicted RBP20.01■□□□□ 0.79
SMPD1-205ENST00000531303 CNGB3Q9NQW8 809 aa20.01■□□□□ 0.79
SMPD1-205ENST00000531303 COG5Q9UP83 839 aa20.01■□□□□ 0.79
SMPD1-205ENST00000531303 PRRC2BQ5JSZ5 2229 aaKnown RBP20.01■□□□□ 0.79
SMPD1-205ENST00000531303 SPDYE4A6NLX3 237 aa20■□□□□ 0.79
SMPD1-205ENST00000531303 FBXO21O94952 628 aa20■□□□□ 0.79
SMPD1-205ENST00000531303 LRG1P02750 347 aa20■□□□□ 0.79
SMPD1-205ENST00000531303 MRPS5P82675 430 aaKnown RBP20■□□□□ 0.79
SMPD1-205ENST00000531303 VEPH1Q14D04 833 aa20■□□□□ 0.79
SMPD1-205ENST00000531303 DUSP6Q16828 381 aa20■□□□□ 0.79
SMPD1-205ENST00000531303 PPM1LQ5SGD2 360 aa20■□□□□ 0.79
SMPD1-205ENST00000531303 ZNF697Q5TEC3 545 aa20■□□□□ 0.79
SMPD1-205ENST00000531303 DCUN1D2Q6PH85 259 aa20■□□□□ 0.79
SMPD1-205ENST00000531303 C3orf20Q8ND61 904 aa20■□□□□ 0.79
SMPD1-205ENST00000531303 FAM149B1Q96BN6 582 aa20■□□□□ 0.79
SMPD1-205ENST00000531303 BTBD6Q96KE9 485 aa20■□□□□ 0.79
SMPD1-205ENST00000531303 MCEEQ96PE7 176 aa20■□□□□ 0.79
SMPD1-205ENST00000531303 HCFC2Q9Y5Z7 792 aa20■□□□□ 0.79
SMPD1-205ENST00000531303 SCINQ9Y6U3 715 aa20■□□□□ 0.79
SMPD1-205ENST00000531303 TCRBV5S1A1TA0A578 114 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 TMEM110-MUSTN1A8MSY1 372 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 CCL16O15467 120 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 MOCS3O95396 460 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 KRT3P12035 628 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 YWHAQP27348 245 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 DAOAP59103 153 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 RPL7AP62424 266 aaKnown RBP19.99■□□□□ 0.79
SMPD1-205ENST00000531303 HFE2Q6ZVN8 426 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 ZDHHC17Q8IUH5 632 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 EMC1Q8N766 993 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 JOSD2Q8TAC2 188 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 ZNF564Q8TBZ8 553 aaPredicted RBP19.99■□□□□ 0.79
SMPD1-205ENST00000531303 TRIM7Q9C029 511 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 MRPL47Q9HD33 250 aaKnown RBP19.99■□□□□ 0.79
SMPD1-205ENST00000531303 USP3Q9Y6I4 520 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 TRANK1O15050 2925 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 SIGLEC16A6NMB1 481 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 YJEFN3A6XGL0 299 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 E7ENQ6 273 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 RFPL2O75678 378 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 RTN3O95197 1032 aaPredicted RBP19.99■□□□□ 0.79
SMPD1-205ENST00000531303 MSNP26038 577 aaKnown RBP19.99■□□□□ 0.79
SMPD1-205ENST00000531303 PLD1Q13393 1074 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 TCEAL5Q5H9L2 206 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 DNAJB7Q7Z6W7 309 aaPredicted RBP19.99■□□□□ 0.79
SMPD1-205ENST00000531303 RHOT2Q8IXI1 618 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 FEZF2Q8TBJ5 459 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 FBXO32Q969P5 355 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 PPP2R3CQ969Q6 453 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 IRX2Q9BZI1 471 aaPredicted RBP19.99■□□□□ 0.79
SMPD1-205ENST00000531303 FBXO44Q9H4M3 255 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 PLEKHA4Q9H4M7 779 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 NSUN3Q9H649 340 aaKnown RBP19.99■□□□□ 0.79
SMPD1-205ENST00000531303 GMIPQ9P107 970 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 UVRAGQ9P2Y5 699 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 ANAPC7Q9UJX3 599 aa19.99■□□□□ 0.79
SMPD1-205ENST00000531303 DOCK6Q96HP0 2047 aa19.98■□□□□ 0.79
SMPD1-205ENST00000531303 A0A0A6YYK5 440 aaPredicted RBP19.98■□□□□ 0.79
SMPD1-205ENST00000531303 CSH1P0DML2 217 aa19.98■□□□□ 0.79
SMPD1-205ENST00000531303 CSH2P0DML3 217 aa19.98■□□□□ 0.79
SMPD1-205ENST00000531303 IGFBP4P22692 258 aa19.98■□□□□ 0.79
SMPD1-205ENST00000531303 RFC1P35251 1148 aaPredicted RBP19.98■□□□□ 0.79
SMPD1-205ENST00000531303 PGFP49763 221 aa19.98■□□□□ 0.79
SMPD1-205ENST00000531303 TAF10Q12962 218 aa19.98■□□□□ 0.79
SMPD1-205ENST00000531303 EFHC1Q5JVL4 640 aa19.98■□□□□ 0.79
SMPD1-205ENST00000531303 PM20D1Q6GTS8 502 aa19.98■□□□□ 0.79
SMPD1-205ENST00000531303 ZNF662Q6ZS27 426 aa19.98■□□□□ 0.79
SMPD1-205ENST00000531303 KHSRPQ92945 711 aaKnown RBP eCLIP19.98■□□□□ 0.79
SMPD1-205ENST00000531303 SCML2Q9UQR0 700 aa19.98■□□□□ 0.79
SMPD1-205ENST00000531303 CDH23Q9H251 3354 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms