RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 ZC3H11AO75152 810 aaKnown RBP eCLIP8.09□□□□□ -1.11
PTPRK-219ENST00000531050 BMP10O95393 424 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 LMNB1P20700 586 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 SLC1A1P43005 524 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 NR4A2P43354 598 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 CASP5P51878 434 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 ZNF135P52742 658 aaPredicted RBP8.09□□□□□ -1.11
PTPRK-219ENST00000531050 NKX2-5P52952 324 aaPredicted RBP8.09□□□□□ -1.11
PTPRK-219ENST00000531050 MARSP56192 900 aaKnown RBP8.09□□□□□ -1.11
PTPRK-219ENST00000531050 JAM2P57087 298 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 ARHGAP8P85298 464 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 PPP2R2BQ00005 443 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 GALNT2Q10471 571 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 PTK6Q13882 451 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 SEC23AQ15436 765 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 ZBED5Q49AG3 693 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 FGD3Q5JSP0 725 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 GPR141Q7Z602 305 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 SETD3Q86TU7 594 aaPredicted RBP8.09□□□□□ -1.11
PTPRK-219ENST00000531050 NOP9Q86U38 636 aaKnown RBP8.09□□□□□ -1.11
PTPRK-219ENST00000531050 SLC51BQ86UW2 128 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 RALGPS2Q86X27 583 aaPredicted RBP8.09□□□□□ -1.11
PTPRK-219ENST00000531050 DGKHQ86XP1 1220 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 IFNL3Q8IZI9 196 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 ATL1Q8WXF7 558 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 PEX13Q92968 403 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 TP53INP1Q96A56 240 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 TMA16Q96EY4 203 aaKnown RBP8.09□□□□□ -1.11
PTPRK-219ENST00000531050 COG8Q96MW5 612 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 CALN1Q9BXU9 219 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 INO80BQ9C086 356 aaPredicted RBP8.09□□□□□ -1.11
PTPRK-219ENST00000531050 ACP6Q9NPH0 428 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 DAPK2Q9UIK4 370 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 PSMD13Q9UNM6 376 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 ATP11BQ9Y2G3 1177 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 TIAM2Q8IVF5 1701 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 CCDC88AQ3V6T2 1871 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 HOXC11O43248 304 aaPredicted RBP8.08□□□□□ -1.12
PTPRK-219ENST00000531050 MSI1O43347 362 aaKnown RBP8.08□□□□□ -1.12
PTPRK-219ENST00000531050 JRKO75564 520 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 GABBR2O75899 941 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 IL1BP01584 269 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 PLS3P13797 630 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 CDH15P55291 814 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 AMPD3Q01432 767 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 GNA12Q03113 381 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 CAV1Q03135 178 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 CDK18Q07002 472 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 RALGDSQ12967 914 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 TJAP1Q5JTD0 557 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 AARS2Q5JTZ9 985 aaKnown RBP8.08□□□□□ -1.12
PTPRK-219ENST00000531050 SEL1L2Q5TEA6 688 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 PLEKHA7Q6IQ23 1121 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 RNF207Q6ZRF8 634 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 CENPUQ71F23 418 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 ZNF598Q86UK7 904 aaKnown RBP8.08□□□□□ -1.12
PTPRK-219ENST00000531050 GLYCTKQ8IVS8 523 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 ZNF34Q8IZ26 560 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 CLIP4Q8N3C7 705 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 UBL4BQ8N7F7 174 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 LILRB1Q8NHL6 650 aaPredicted RBP8.08□□□□□ -1.12
PTPRK-219ENST00000531050 TCP10LQ8TDR4 215 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 C1orf54Q8WWF1 131 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 C8orf48Q96LL4 319 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 NLRP4Q96MN2 994 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 DOK1Q99704 481 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.08□□□□□ -1.12
PTPRK-219ENST00000531050 PCDH12Q9NPG4 1184 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 KCNK4Q9NYG8 393 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 EPS15L1Q9UBC2 864 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 CNTNAP5Q8WYK1 1306 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 ILVBLA1L0T0 632 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 ENPP3O14638 875 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 DYNC1LI2O43237 492 aaPredicted RBP8.08□□□□□ -1.12
PTPRK-219ENST00000531050 GMNNO75496 209 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 ALX3O95076 343 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 KLHL2O95198 593 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 CTRB1P17538 263 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 NELFEP18615 380 aaKnown RBP8.08□□□□□ -1.12
PTPRK-219ENST00000531050 MAGEA4P43358 317 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 KRT6CP48668 564 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 KCNH2Q12809 1159 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 UBAP2LQ14157 1087 aaKnown RBP8.08□□□□□ -1.12
PTPRK-219ENST00000531050 SCARA3Q6AZY7 606 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 CTRB2Q6GPI1 263 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 ZBTB46Q86UZ6 589 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 HACE1Q8IYU2 909 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 MARCH10Q8NA82 808 aaPredicted RBP8.08□□□□□ -1.12
PTPRK-219ENST00000531050 MIGA1Q8NAN2 632 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 ANGPTL6Q8NI99 470 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 DPF3Q92784 378 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 C17orf80Q9BSJ5 609 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 ZNF341Q9BYN7 854 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 THAP2Q9H0W7 228 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 ZNF304Q9HCX3 659 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 CD209Q9NNX6 404 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 CDH22Q9UJ99 828 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 RIMS3Q9UJD0 308 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 RTL9Q8NET4 1388 aa8.08□□□□□ -1.12
PTPRK-219ENST00000531050 ZNF532Q9HCE3 1301 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms