RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 ADCY7P51828 1080 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 ATXN3P54252 364 aaPredicted RBP14.69□□□□□ -0.06
PCF11-204ENST00000530660 MRPS22P82650 360 aaKnown RBP14.69□□□□□ -0.06
PCF11-204ENST00000530660 ADGRD1Q6QNK2 874 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 TPTE2Q6XPS3 522 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 ARHGEF19Q8IW93 802 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 SIX5Q8N196 739 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 CHPT1Q8WUD6 406 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 ANKRD36BP1Q96IX9 119 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 NUF2Q9BZD4 464 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 NYXQ9GZU5 481 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 VTA1Q9NP79 307 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 GPRC5DQ9NZD1 345 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.69□□□□□ -0.06
PCF11-204ENST00000530660 CNTN3Q9P232 1028 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 POU2F3Q9UKI9 436 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 PSMD13Q9UNM6 376 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 RNF11Q9Y3C5 154 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 SHANK3Q9BYB0 1731 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 SPATA31A1Q5TZJ5 1347 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 TAF1P21675 1872 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 I3L4J1 428 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 DNALI1O14645 258 aaPredicted RBP14.69□□□□□ -0.06
PCF11-204ENST00000530660 TGFB1I1O43294 461 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 MTA2O94776 668 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 ATE1O95260 518 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 NTSR2O95665 410 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 BMP3P12645 472 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 PCYT1AP49585 367 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 ARSEP51690 589 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 NRF1Q16656 503 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 ARL13BQ3SXY8 428 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 RARS2Q5T160 578 aaKnown RBP14.69□□□□□ -0.06
PCF11-204ENST00000530660 LLGL2Q6P1M3 1020 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 CENPUQ71F23 418 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 MIER3Q7Z3K6 550 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 HAUS8Q9BT25 410 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 ANAPC7Q9UJX3 599 aa14.69□□□□□ -0.06
PCF11-204ENST00000530660 C10orf71Q711Q0 1435 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 KDM1AO60341 852 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 ZC3H11AO75152 810 aaKnown RBP eCLIP14.68□□□□□ -0.068e-19■■■□□ 16.8
PCF11-204ENST00000530660 MED24O75448 989 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 SERPINA6P08185 405 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 GLRA2P23416 452 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 COPAP53621 1224 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 SLC12A3P55017 1021 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 C2CD6Q53TS8 623 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 DCAKDQ8WVC6 231 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 EME1Q96AY2 570 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 CEP295NLQ96MC4 621 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 RABGAP1Q9Y3P9 1069 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 IQCA1LA6NCM1 817 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 SLC16A3O15427 465 aaKnown RBP14.68□□□□□ -0.06
PCF11-204ENST00000530660 FBXO21O94952 628 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 SLC1A1P43005 524 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 CYP2J2P51589 502 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 RAB15P59190 212 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 RPS3AP61247 264 aaKnown RBP14.68□□□□□ -0.06
PCF11-204ENST00000530660 TCEAL1Q15170 157 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 MSS51Q4VC12 460 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 KAZNQ674X7 775 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 GPR180Q86V85 440 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 LILRA2Q8N149 483 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 SIN3BO75182 1162 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 BAIAP3O94812 1187 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 PSMC3P17980 439 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 AOC1P19801 751 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 NR4A1P22736 598 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 PSMC2P35998 433 aaKnown RBP14.68□□□□□ -0.06
PCF11-204ENST00000530660 BTDP43251 543 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 BMXP51813 675 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 MYL7Q01449 175 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 BNIP3Q12983 259 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 ITGADQ13349 1161 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 CHI3L2Q15782 390 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 PPP6R3Q5H9R7 873 aaPredicted RBP14.68□□□□□ -0.06
PCF11-204ENST00000530660 ZCCHC23Q6ZST2 131 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 FBXO33Q7Z6M2 555 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 SLC47A2Q86VL8 602 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 PEX5LQ8IYB4 626 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 TBC1D15Q8TC07 691 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 HPS1Q92902 700 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 KLHL11Q9NVR0 708 aa14.68□□□□□ -0.06
PCF11-204ENST00000530660 A0A1W2PPW3 197 aa14.67□□□□□ -0.06
PCF11-204ENST00000530660 CCDC162PA2VCL2 907 aa14.67□□□□□ -0.06
PCF11-204ENST00000530660 KRBA1A5PL33 1030 aa14.67□□□□□ -0.06
PCF11-204ENST00000530660 PRDX6P30041 224 aa14.67□□□□□ -0.06
PCF11-204ENST00000530660 TUFMP49411 452 aaKnown RBP14.67□□□□□ -0.06
PCF11-204ENST00000530660 KLF1Q13351 362 aaPredicted RBP14.67□□□□□ -0.06
PCF11-204ENST00000530660 C6orf203Q9P0P8 240 aaPredicted RBP14.67□□□□□ -0.06
PCF11-204ENST00000530660 DNPEPQ9ULA0 475 aa14.67□□□□□ -0.06
PCF11-204ENST00000530660 ANKRD34BA5PLL1 514 aa14.67□□□□□ -0.06
PCF11-204ENST00000530660 SULT1C4O75897 302 aa14.67□□□□□ -0.06
PCF11-204ENST00000530660 S100BP04271 92 aaPredicted RBP14.67□□□□□ -0.06
PCF11-204ENST00000530660 CCDC130P13994 396 aa14.67□□□□□ -0.06
PCF11-204ENST00000530660 NR1D2Q14995 579 aa14.67□□□□□ -0.06
PCF11-204ENST00000530660 FGD3Q5JSP0 725 aa14.67□□□□□ -0.06
PCF11-204ENST00000530660 MAPKAPK5Q8IW41 473 aa14.67□□□□□ -0.06
PCF11-204ENST00000530660 FBXW8Q8N3Y1 598 aa14.67□□□□□ -0.06
PCF11-204ENST00000530660 TAMM41Q96BW9 452 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms