RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-209ENST00000530468 LNP1A1A4G5 178 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 COCHO43405 550 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 KLF8O95600 359 aaPredicted RBP16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 TNFRSF4P43489 277 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 SLC6A11P48066 632 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 TUBP50607 506 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 GAD2Q05329 585 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 BIRC3Q13489 604 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 ZNF699Q32M78 642 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 PREPLQ4J6C6 727 aaPredicted RBP16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 ZNF667Q5HYK9 610 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 HECTD3Q5T447 861 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 TMEM92Q6UXU6 159 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 FAM35AQ86V20 835 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 ALLCQ8N6M5 410 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 IL17RCQ8NAC3 791 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 TXNDC5Q8NBS9 432 aaKnown RBP16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 OLIG1Q8TAK6 271 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 WHAMMQ8TF30 809 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 SMARCD1Q96GM5 515 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 SPACA7Q96KW9 195 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 BLZF1Q9H2G9 400 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 SLC39A2Q9NP94 309 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 DMAP1Q9NPF5 467 aaPredicted RBP16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 ARHGEF4Q9NR80 690 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 FAM13BQ9NYF5 915 aa16.54■□□□□ 0.24
TM9SF1-209ENST00000530468 EPG5Q9HCE0 2579 aa16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 C4orf47A7E2U8 309 aa16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 SCAMP3O14828 347 aaKnown RBP16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 CLSTN1O94985 981 aa16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 CHRM1P11229 460 aaPredicted RBP16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 BCKDHBP21953 392 aa16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 TIE1P35590 1138 aa16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 KIR2DL1P43626 348 aaPredicted RBP16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 SLC5A3P53794 718 aa16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 CLDN10P78369 228 aa16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 BYSLQ13895 437 aaKnown RBP16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 BTBD8Q5XKL5 378 aa16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 PSAPL1Q6NUJ1 521 aa16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 C12orf40Q86WS4 652 aa16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 TTC30AQ86WT1 665 aa16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 PARD3BQ8TEW8 1205 aa16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 ZFRQ96KR1 1074 aaKnown RBP16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 KCNK16Q96T55 309 aa16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 MED10Q9BTT4 135 aa16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 SMYD3Q9H7B4 428 aa16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 IL37Q9NZH6 218 aa16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 SH3BP1Q9Y3L3 701 aa16.53■□□□□ 0.24
TM9SF1-209ENST00000530468 FAM92AA1XBS5 289 aa16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 ANTXRLA6NF34 631 aa16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 SGK1O00141 431 aa16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 TNFRSF10BO14763 440 aa16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 P4HA1P13674 534 aa16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 CASP1P29466 404 aa16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 P2RY2P41231 377 aa16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 DHPSP49366 369 aaPredicted RBP16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 CASP4P49662 377 aa16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 NOVA1P51513 510 aaKnown RBP16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 KDSRQ06136 332 aa16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 MESP2Q0VG99 397 aa16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 NCOA4Q13772 614 aa16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 LY6G5CQ5SRR4 150 aa16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 NUDT18Q6ZVK8 323 aa16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 TRMT11Q7Z4G4 463 aaKnown RBP16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 KCNV2Q8TDN2 545 aa16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 TMEM174Q8WUU8 243 aa16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 TMEM9BQ9NQ34 198 aa16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 BCCIPQ9P287 314 aaKnown RBP eCLIP16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 CHORDC1Q9UHD1 332 aaPredicted RBP16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 EVLQ9UI08 416 aaPredicted RBP16.52■□□□□ 0.24
TM9SF1-209ENST00000530468 LRRIQ3A6PVS8 624 aaPredicted RBP16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 HOXC11O43248 304 aaPredicted RBP16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 ZDHHC11BP0C7U3 371 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 HNRNPLP14866 589 aaKnown RBP eCLIP16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 DPP6P42658 865 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 AFMP43652 599 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 ME1P48163 572 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 CDH8P55286 799 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 CUL4BQ13620 913 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 SPDYCQ5MJ68 293 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 EMC10Q5UCC4 262 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 RESP18Q5W5W9 173 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 ATL3Q6DD88 541 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 SCARA5Q6ZMJ2 495 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 PAQR9Q6ZVX9 377 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 LPCAT2Q7L5N7 544 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 SLC9A9Q8IVB4 645 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 SFTPA1Q8IWL2 248 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 ETFBKMTQ8IXQ9 262 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 CEP57L1Q8IYX8 460 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 PHTF2Q8N3S3 785 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 SCAMP5Q8TAC9 235 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 PLEKHO2Q8TD55 490 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 CCSER2Q9H7U1 834 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 SPHK2Q9NRA0 654 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 KRT82Q9NSB4 513 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 PCDHA7Q9UN72 937 aa16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 KMT2BQ9UMN6 2715 aaPredicted RBP16.51■□□□□ 0.23
TM9SF1-209ENST00000530468 TBC1D3BA6NDS4 549 aa16.5■□□□□ 0.23
TM9SF1-209ENST00000530468 MAP3K13O43283 966 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms