RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, human

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-223	ENST00000529986	PEX5	P50542	639 aa		7.89	□□□□□ -1.15
CTNND1-223	ENST00000529986	ALDH6A1	Q02252	535 aa	Known RBP	7.89	□□□□□ -1.15
CTNND1-223	ENST00000529986	FAM83E	Q2M2I3	478 aa		7.89	□□□□□ -1.15
CTNND1-223	ENST00000529986	RABL6	Q3YEC7	729 aa	Predicted RBP	7.89	□□□□□ -1.15
CTNND1-223	ENST00000529986	SEZ6	Q53EL9	994 aa		7.89	□□□□□ -1.15
CTNND1-223	ENST00000529986	KLHL17	Q6TDP4	642 aa		7.89	□□□□□ -1.15
CTNND1-223	ENST00000529986	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	7.89	□□□□□ -1.15
CTNND1-223	ENST00000529986	TERB1	Q8NA31	727 aa		7.89	□□□□□ -1.15
CTNND1-223	ENST00000529986	SLC7A14	Q8TBB6	771 aa		7.89	□□□□□ -1.15
CTNND1-223	ENST00000529986	HDHD2	Q9H0R4	259 aa		7.89	□□□□□ -1.15
CTNND1-223	ENST00000529986	PARVB	Q9HBI1	364 aa		7.89	□□□□□ -1.15
CTNND1-223	ENST00000529986	ATAD3A	Q9NVI7	634 aa		7.89	□□□□□ -1.15
CTNND1-223	ENST00000529986	PACSIN3	Q9UKS6	424 aa		7.89	□□□□□ -1.15
CTNND1-223	ENST00000529986	ADAMTS13	Q76LX8	1427 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	SPATA31D1	Q6ZQQ2	1576 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	TRIM43B	A6NCK2	446 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	KRT87P	A6NCN2	255 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	FAM25A	B3EWG3	89 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	FAM25C	B3EWG5	89 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	FAM25G	B3EWG6	89 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	TNFRSF21	O75509	655 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	ASNS	P08243	561 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	AKT1	P31749	480 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	RPL21	P46778	160 aa	Known RBP	7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	GPSM2	P81274	684 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	NFIL3	Q16649	462 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	DGKD	Q16760	1214 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	CYP51A1	Q16850	503 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	KBTBD12	Q3ZCT8	623 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	DGKK	Q5KSL6	1271 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	ZNF618	Q5T7W0	954 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	C11orf96	Q7Z7L8	435 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	LRRC71	Q8N4P6	559 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	MCRS1	Q96EZ8	462 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	DCUN1D1	Q96GG9	259 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	CD209	Q9NNX6	404 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	VTA1	Q9NP79	307 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	IARS2	Q9NSE4	1012 aa	Known RBP	7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	GTF3C4	Q9UKN8	822 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	MYRF	Q9Y2G1	1151 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	TMEM191C	A6NGB0	347 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	FAM20B	O75063	409 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	KLHL18	O94889	574 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	CYP19A1	P11511	503 aa	Predicted RBP	7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	CENPA	P49450	140 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	DDX39B	Q13838	428 aa	Known RBP	7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	PDK1	Q15118	436 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	PKN2	Q16513	984 aa	Known RBP	7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	B3GNT6	Q6ZMB0	384 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	ATG16L2	Q8NAA4	619 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	KY	Q8NBH2	561 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	NEDD1	Q8NHV4	660 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	SLC20A1	Q8WUM9	679 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	PLA2G12B	Q9BX93	195 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	SEMA6B	Q9H3T3	888 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	7.88	□□□□□ -1.15	2e-7	■■□□□ 14.4
CTNND1-223	ENST00000529986	MPP6	Q9NZW5	540 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	TMEM131L	A2VDJ0	1609 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	ENTPD5	O75356	428 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	GRIK1	P39086	918 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	PTDSS1	P48651	473 aa	Known RBP	7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	AP3M2	P53677	418 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	NCKAP1L	P55160	1127 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	PKNOX1	P55347	436 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	ZRANB3	Q5FWF4	1079 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	PTRHD1	Q6GMV3	140 aa	Known RBP	7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	TAF2	Q6P1X5	1199 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	LDHD	Q86WU2	507 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	TNIP2	Q8NFZ5	429 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	ZNF483	Q8TF39	744 aa	Predicted RBP	7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	SLC5A5	Q92911	643 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	RAD21L1	Q9H4I0	556 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	TMEM8A	Q9HCN3	771 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	TJP2	Q9UDY2	1190 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	SLC30A1	Q9Y6M5	507 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	FLT1	P17948	1338 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	RPS6KA4	O75676	772 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	DDHD2	O94830	711 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	CPA3	P15088	417 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	MRPS22	P82650	360 aa	Known RBP	7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	TRIM71	Q2Q1W2	868 aa	Known RBP	7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	RBM43	Q6ZSC3	357 aa	Known RBP	7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	ELMO3	Q96BJ8	720 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	ZFR	Q96KR1	1074 aa	Known RBP	7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	SPATA33	Q96N06	139 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	MAP3K14	Q99558	947 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	RNPEPL1	Q9HAU8	725 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	PIH1D1	Q9NWS0	290 aa	Known RBP	7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	SPAST	Q9UBP0	616 aa		7.88	□□□□□ -1.15
CTNND1-223	ENST00000529986	INPP4B	O15327	924 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	PROC	P04070	461 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	CCT3	P49368	545 aa	Known RBP	7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	PRIM2	P49643	509 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	PSMC6	P62333	389 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	VAC14	Q08AM6	782 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	CLEC16A	Q2KHT3	1053 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	SYTL3	Q4VX76	610 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	EFCAB3	Q8N7B9	438 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	NARS2	Q96I59	477 aa	Known RBP	7.87	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms