RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 FAM221BA6H8Z2 402 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 MYMKA6NI61 221 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 UPK3BL1B0FP48 263 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 UPK3BL2E5RIL1 263 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 AP5Z1O43299 807 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 FAM13AO94988 1023 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 ADRB2P07550 413 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 ADH5P11766 374 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 HOXB2P14652 356 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 GABRG2P18507 467 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 PLCG1P19174 1290 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 KIR2DL1P43626 348 aaPredicted RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 SMCPP49901 116 aaPredicted RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 PRSS12P56730 875 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 COPS2P61201 443 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 RPL10AP62906 217 aaKnown RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 MRPS21P82921 87 aaKnown RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 TFAMQ00059 246 aaKnown RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 CYP4F3Q08477 520 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 GRIK2Q13002 908 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 ORC2Q13416 577 aaPredicted RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 NFE2Q16621 373 aaPredicted RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 PLEKHG6Q3KR16 790 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 EOGTQ5NDL2 527 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 PEAR1Q5VY43 1037 aaPredicted RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 RHBDF2Q6PJF5 856 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 DTHD1Q6ZMT9 781 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 GPBP1Q86WP2 473 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 CACUL1Q86Y37 369 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 SYT2Q8N9I0 419 aaPredicted RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 PIP4K2CQ8TBX8 421 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 SETD7Q8WTS6 366 aaKnown RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 ADAMTS14Q8WXS8 1223 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 TATDN2Q93075 761 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 SAAL1Q96ER3 474 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 TRMT2BQ96GJ1 504 aaKnown RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 CDK5RAP3Q96JB5 506 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 PKMYT1Q99640 499 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 TRIM9Q9C026 710 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 RNF38Q9H0F5 515 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 FOXP1Q9H334 677 aaPredicted RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 PRDM16Q9HAZ2 1276 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 ARHGAP26Q9UNA1 814 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 AGAP1Q9UPQ3 857 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 SNX9Q9Y5X1 595 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 RAD54BQ9Y620 910 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 PTPRDP23468 1912 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 GOLGA8IPA6NC78 632 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 VWA3AA6NCI4 1184 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 TBC1D3BA6NDS4 549 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 GOLGA8JA6NMD2 632 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 HUS1O60921 280 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 PIGRP01833 764 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 KRT18P05783 430 aaKnown RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 KRT19P08727 400 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 IRF1P10914 325 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 MBL2P11226 248 aaPredicted RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 NDUFV2P19404 249 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 BDNFP23560 247 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 GRIK1P39086 918 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 NEK4P51957 841 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 CLDN6P56747 220 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 MYL7Q01449 175 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 CYP27A1Q02318 531 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 SMARCB1Q12824 385 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 KYAT1Q16773 422 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 LY6G5CQ5SRR4 150 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 C10orf76Q5T2E6 689 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 EGFLAMQ63HQ2 1017 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 KIAA1324Q6UXG2 1013 aaKnown RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 CRELD2Q6UXH1 353 aaPredicted RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 TOGARAM2Q6ZUX3 1019 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 CD302Q8IX05 232 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 ADGRF2Q8IZF7 708 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 ZCCHC9Q8N567 271 aaKnown RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 ZNF513Q8N8E2 541 aaPredicted RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 C1orf127Q8N9H9 656 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 FSIP1Q8NA03 581 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 CCDC26Q8TAB7 109 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 CEP76Q8TAP6 659 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 MYRFLQ96LU7 910 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 ZNF560Q96MR9 790 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 ACOX2Q99424 681 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 FAM213AQ9BRX8 229 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 TIPINQ9BVW5 301 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 MIR1-1HGQ9H1L0 117 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 DNAAF2Q9NVR5 837 aaKnown RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 TRPM5Q9NZQ8 1165 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 LARSQ9P2J5 1176 aaKnown RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 AGO2Q9UKV8 859 aaKnown RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 HCN2Q9UL51 889 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 DERAQ9Y315 318 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 C2CD2Q9Y426 696 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 GOLGA4Q13439 2230 aaKnown RBP3.76□□□□□ -1.81
PTPRC-213ENST00000529828 BOD1L1Q8NFC6 3051 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 DENND4CQ5VZ89 1909 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 NBPF19A0A087WUL8 3843 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 A0A1W2PQF6 199 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 ZNF840PA6NDX5 716 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 MEI4A8MW99 385 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms