RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	AMPD3	Q01432	767 aa		12.09	□□□□□ -0.47
PTP4A2-211	ENST00000528840	KDSR	Q06136	332 aa		12.09	□□□□□ -0.47
PTP4A2-211	ENST00000528840	PSMD6	Q15008	389 aa		12.09	□□□□□ -0.47
PTP4A2-211	ENST00000528840	STK38	Q15208	465 aa		12.09	□□□□□ -0.47
PTP4A2-211	ENST00000528840	TRIM61	Q5EBN2	209 aa		12.09	□□□□□ -0.47
PTP4A2-211	ENST00000528840	LY6G5C	Q5SRR4	150 aa		12.09	□□□□□ -0.47
PTP4A2-211	ENST00000528840	NELFCD	Q8IXH7	590 aa		12.09	□□□□□ -0.47
PTP4A2-211	ENST00000528840	KIAA1958	Q8N8K9	716 aa		12.09	□□□□□ -0.47
PTP4A2-211	ENST00000528840	DEFB124	Q8NES8	71 aa		12.09	□□□□□ -0.47
PTP4A2-211	ENST00000528840	WHAMM	Q8TF30	809 aa		12.09	□□□□□ -0.47
PTP4A2-211	ENST00000528840	HMGB4	Q8WW32	186 aa		12.09	□□□□□ -0.47
PTP4A2-211	ENST00000528840	DHX58	Q96C10	678 aa		12.09	□□□□□ -0.47
PTP4A2-211	ENST00000528840	MED10	Q9BTT4	135 aa		12.09	□□□□□ -0.47
PTP4A2-211	ENST00000528840	ELOVL4	Q9GZR5	314 aa		12.09	□□□□□ -0.47
PTP4A2-211	ENST00000528840	TNMD	Q9H2S6	317 aa		12.09	□□□□□ -0.47
PTP4A2-211	ENST00000528840	AGPAT3	Q9NRZ7	376 aa		12.09	□□□□□ -0.47
PTP4A2-211	ENST00000528840	KBTBD4	Q9NVX7	518 aa		12.09	□□□□□ -0.47
PTP4A2-211	ENST00000528840	MBD1	Q9UIS9	605 aa	Predicted RBP	12.09	□□□□□ -0.47
PTP4A2-211	ENST00000528840	MTMR6	Q9Y217	621 aa		12.09	□□□□□ -0.47
PTP4A2-211	ENST00000528840	SH3BP1	Q9Y3L3	701 aa		12.09	□□□□□ -0.47
PTP4A2-211	ENST00000528840	KMT2B	Q9UMN6	2715 aa	Predicted RBP	12.09	□□□□□ -0.47
PTP4A2-211	ENST00000528840	E2F8	A0AVK6	867 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	TNFRSF10B	O14763	440 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	COCH	O43405	550 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	ADAM23	O75077	832 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	RTN3	O95197	1032 aa	Predicted RBP	12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	CSRP1	P21291	193 aa	Known RBP	12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	EIF2D	P41214	584 aa	Known RBP	12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	PTGER3	P43115	390 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	KIR2DL1	P43626	348 aa	Predicted RBP	12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	GAD2	Q05329	585 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	CYP24A1	Q07973	514 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	LMAN2	Q12907	356 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	BYSL	Q13895	437 aa	Known RBP	12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	ANO4	Q32M45	955 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	MAP7D1	Q3KQU3	841 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	HSF5	Q4G112	596 aa	Predicted RBP	12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	HECTD3	Q5T447	861 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	BTBD8	Q5XKL5	378 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	UNQ6494/PRO21346	Q6UXR6	183 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	EPM2AIP1	Q7L775	607 aa	Predicted RBP	12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	DDX42	Q86XP3	938 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	SYT12	Q8IV01	421 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	XXYLT1	Q8NBI6	393 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	B3GALNT2	Q8NCR0	500 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	SCAMP5	Q8TAC9	235 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	FBXO32	Q969P5	355 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	ELMO3	Q96BJ8	720 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	SPACA7	Q96KW9	195 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	CGRRF1	Q99675	332 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	NUSAP1	Q9BXS6	441 aa	Known RBP	12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	TRIM9	Q9C026	710 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	ZMIZ1	Q9ULJ6	1067 aa		12.08	□□□□□ -0.48
PTP4A2-211	ENST00000528840	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	TCRBV21S2A2	A0A5A6	115 aa		12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	EIF3D	O15371	548 aa	Known RBP eCLIP	12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	CLSTN1	O94985	981 aa		12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	WAS	P42768	502 aa		12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	E2F4	Q16254	413 aa		12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	FAM26F	Q5R3K3	315 aa		12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	TMEM25	Q86YD3	366 aa		12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	IQUB	Q8NA54	791 aa		12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	LINC00301	Q8NCQ3	95 aa		12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	PDZD8	Q8NEN9	1154 aa		12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	SCFD1	Q8WVM8	642 aa		12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	WBP2	Q969T9	261 aa		12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	C7orf25	Q9BPX7	421 aa		12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	NACA2	Q9H009	215 aa		12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	XYLT2	Q9H1B5	865 aa		12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	CCSER2	Q9H7U1	834 aa		12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	DEC1	Q9P2X7	70 aa		12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	EVL	Q9UI08	416 aa	Predicted RBP	12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	WASF3	Q9UPY6	502 aa		12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	MYO16	Q9Y6X6	1858 aa		12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	MORC2	Q9Y6X9	1032 aa	Predicted RBP	12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	EPG5	Q9HCE0	2579 aa		12.07	□□□□□ -0.48
PTP4A2-211	ENST00000528840	MAP1B	P46821	2468 aa	Known RBP	12.06	□□□□□ -0.48
PTP4A2-211	ENST00000528840	NUP205	Q92621	2012 aa		12.06	□□□□□ -0.48
PTP4A2-211	ENST00000528840	CNOT1	A5YKK6	2376 aa	Known RBP	12.06	□□□□□ -0.48
PTP4A2-211	ENST00000528840	MYOF	Q9NZM1	2061 aa		12.06	□□□□□ -0.48
PTP4A2-211	ENST00000528840	SPTLC2	O15270	562 aa		12.06	□□□□□ -0.48
PTP4A2-211	ENST00000528840	TULP3	O75386	442 aa		12.06	□□□□□ -0.48
PTP4A2-211	ENST00000528840	CFI	P05156	583 aa		12.06	□□□□□ -0.48
PTP4A2-211	ENST00000528840	IRF1	P10914	325 aa		12.06	□□□□□ -0.48
PTP4A2-211	ENST00000528840	CHRM1	P11229	460 aa	Predicted RBP	12.06	□□□□□ -0.48
PTP4A2-211	ENST00000528840	ENG	P17813	658 aa		12.06	□□□□□ -0.48
PTP4A2-211	ENST00000528840	ITPKA	P23677	461 aa		12.06	□□□□□ -0.48
PTP4A2-211	ENST00000528840	CASP1	P29466	404 aa		12.06	□□□□□ -0.48
PTP4A2-211	ENST00000528840	ATIC	P31939	592 aa		12.06	□□□□□ -0.48
PTP4A2-211	ENST00000528840	NASP	P49321	788 aa	Predicted RBP	12.06	□□□□□ -0.48
PTP4A2-211	ENST00000528840	CASP4	P49662	377 aa		12.06	□□□□□ -0.48
PTP4A2-211	ENST00000528840	SNRPF	P62306	86 aa	Known RBP	12.06	□□□□□ -0.48
PTP4A2-211	ENST00000528840	BIRC3	Q13489	604 aa		12.06	□□□□□ -0.48
PTP4A2-211	ENST00000528840	LYSMD4	Q5XG99	296 aa		12.06	□□□□□ -0.48
PTP4A2-211	ENST00000528840	NUDT18	Q6ZVK8	323 aa		12.06	□□□□□ -0.48
PTP4A2-211	ENST00000528840	PAQR9	Q6ZVX9	377 aa		12.06	□□□□□ -0.48
PTP4A2-211	ENST00000528840	BBS7	Q8IWZ6	715 aa		12.06	□□□□□ -0.48
PTP4A2-211	ENST00000528840	PHTF2	Q8N3S3	785 aa		12.06	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms