RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 PPP1R2P3Q6NXS1 205 aa12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 H2AFVQ71UI9 128 aa12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 XYLT1Q86Y38 959 aa12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 EFHBQ8N7U6 833 aa12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 IPO4Q8TEX9 1081 aaKnown RBP12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 PIWIL1Q96J94 861 aaKnown RBP12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 VCPIP1Q96JH7 1222 aa12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 CEP295NLQ96MC4 621 aa12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ULBP1Q9BZM6 244 aa12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 THAP2Q9H0W7 228 aa12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 IL37Q9NZH6 218 aa12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 CHORDC1Q9UHD1 332 aaPredicted RBP12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 PYCARDQ9ULZ3 195 aa12.79□□□□□ -0.36
TRAF3IP2-211ENST00000528599 A0A0U1RQJ8 604 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ANKRD62A6NC57 917 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 CCL16O15467 120 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ATMINO43313 823 aaPredicted RBP12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 LRG1P02750 347 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 CALB1P05937 261 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 USP17L7P0C7H9 530 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 RRM1P23921 792 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 LTBRP36941 435 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 TFF2Q03403 129 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 PLD1Q13393 1074 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 C10orf76Q5T2E6 689 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 PM20D1Q6GTS8 502 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 FAM183BPQ6ZVS7 135 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 RTL10Q7L3V2 364 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 BHLHA9Q7RTU4 235 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 DNAJB7Q7Z6W7 309 aaPredicted RBP12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 SIX6OS1Q8N1H7 587 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 C12orf76Q8N812 135 aaPredicted RBP12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 MSANTD4Q8NCY6 345 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ATRIPQ8WXE1 791 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ZNF653Q96CK0 615 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ARHGEF26Q96DR7 871 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 MCRS1Q96EZ8 462 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 TTLL2Q9BWV7 592 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 DPP7Q9UHL4 492 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 GREB1Q4ZG55 1949 aa12.78□□□□□ -0.36
TRAF3IP2-211ENST00000528599 NCANO14594 1321 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 TCRBV5S1A1TA0A578 114 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 FAM92AA1XBS5 289 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 RTN3O95197 1032 aaPredicted RBP12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 IPO7O95373 1038 aaKnown RBP12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 GJB6O95452 261 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ZBED1O96006 694 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 CSH1P0DML2 217 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 CSH2P0DML3 217 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 HOXA9P31269 272 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 PGFP49763 221 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 DAOAP59103 153 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 KRT83P78385 493 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ADAM15Q13444 863 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ZNF268Q14587 947 aaPredicted RBP12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 VEPH1Q14D04 833 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 TAF5Q15542 800 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 CTC1Q2NKJ3 1217 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 OR6B2Q6IFH4 312 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 OLFML1Q6UWY5 402 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 TMEM184AQ6ZMB5 413 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 CASP10Q92851 521 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 KHSRPQ92945 711 aaKnown RBP eCLIP12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 PSMG2Q969U7 264 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ZNF707Q96C28 371 aaPredicted RBP12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 CNGB3Q9NQW8 809 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ZDHHC7Q9NXF8 308 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 CNOT8Q9UFF9 292 aaKnown RBP12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 MAGED2Q9UNF1 606 aaPredicted RBP12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 ASB3Q9Y575 518 aa12.77□□□□□ -0.36
TRAF3IP2-211ENST00000528599 CCDC195A0A1B0GUA6 201 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 YJEFN3A6XGL0 299 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 E7ENQ6 273 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 GOLGA8SH3BPF8 625 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 TBX10O75333 385 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 FBXO21O94952 628 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 HNRNPA1P09651 372 aaKnown RBP eCLIP12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 TMEM253P0C7T8 217 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 YWHAQP27348 245 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 VAV2P52735 878 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 GSCP56915 257 aaPredicted RBP12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 SNX16P57768 344 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 GPC5P78333 572 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 MRPS5P82675 430 aaKnown RBP12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 SLC6A3Q01959 620 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 TAF10Q12962 218 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 SKIV2LQ15477 1246 aaKnown RBP12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 PLEKHA7Q6IQ23 1121 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 HS6ST3Q8IZP7 471 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 SCML4Q8N228 414 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 TRIM11Q96F44 468 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 MYRFLQ96LU7 910 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 ZNF512Q96ME7 567 aaPredicted RBP12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 LRRC3Q9BY71 257 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 LACRTQ9GZZ8 138 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 FBXO44Q9H4M3 255 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 ZNF334Q9HCZ1 680 aaPredicted RBP12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 HCFC1R1Q9NWW0 138 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 COMMD8Q9NX08 183 aa12.77□□□□□ -0.37
TRAF3IP2-211ENST00000528599 MYO1AQ9UBC5 1043 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms