RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	CNTN3	Q9P232	1028 aa		24.39	■■□□□ 1.5
GSDMD-208	ENST00000528475	PAK5	Q9P286	719 aa		24.39	■■□□□ 1.5
GSDMD-208	ENST00000528475	MTO1	Q9Y2Z2	717 aa	Known RBP	24.39	■■□□□ 1.5
GSDMD-208	ENST00000528475	C2CD4B	A6NLJ0	364 aa		24.39	■■□□□ 1.49
GSDMD-208	ENST00000528475	TPBGL	P0DKB5	382 aa		24.39	■■□□□ 1.49
GSDMD-208	ENST00000528475	P4HA1	P13674	534 aa		24.39	■■□□□ 1.49
GSDMD-208	ENST00000528475	FAAP100	Q0VG06	881 aa		24.39	■■□□□ 1.49
GSDMD-208	ENST00000528475	MMRN1	Q13201	1228 aa		24.39	■■□□□ 1.49
GSDMD-208	ENST00000528475	ORC1	Q13415	861 aa		24.39	■■□□□ 1.49
GSDMD-208	ENST00000528475	TMEM132A	Q24JP5	1023 aa		24.39	■■□□□ 1.49
GSDMD-208	ENST00000528475	NPNT	Q6UXI9	565 aa		24.39	■■□□□ 1.49
GSDMD-208	ENST00000528475	BZW1	Q7L1Q6	419 aa	Known RBP	24.39	■■□□□ 1.49
GSDMD-208	ENST00000528475	RNF157	Q96PX1	679 aa		24.39	■■□□□ 1.49
GSDMD-208	ENST00000528475	MPHOSPH6	Q99547	160 aa	Known RBP	24.39	■■□□□ 1.49
GSDMD-208	ENST00000528475	NUMBL	Q9Y6R0	609 aa		24.39	■■□□□ 1.49
GSDMD-208	ENST00000528475	LACTBL1	A8MY62	500 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	NOP56	O00567	594 aa	Known RBP	24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	KLF11	O14901	512 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	PEX10	O60683	326 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	C1QA	P02745	245 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	ITGB3	P05106	788 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	GM2A	P17900	193 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	ILDR2	Q71H61	639 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	NCAPG2	Q86XI2	1143 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	C12orf65	Q9H3J6	166 aa	Known RBP	24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	USP29	Q9HBJ7	922 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	PRMT7	Q9NVM4	692 aa	Predicted RBP	24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	DCTN4	Q9UJW0	460 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	LRRC42	Q9Y546	428 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	PTPRF	P10586	1907 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	CFAP69	A5D8W1	941 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	GPR25	O00155	361 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	SOCS7	O14512	581 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	ARFIP2	P53365	341 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	TNFAIP2	Q03169	654 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	OVGP1	Q12889	678 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	FAM187B	Q17R55	369 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	CMPK2	Q5EBM0	449 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	JADE1	Q6IE81	842 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	EEPD1	Q7L9B9	569 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	USP6NL	Q92738	828 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	SKA1	Q96BD8	255 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	FAF2	Q96CS3	445 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	PTCD3	Q96EY7	689 aa	Known RBP	24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	ASB7	Q9H672	318 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	ZNF180	Q9UJW8	692 aa		24.38	■■□□□ 1.49
GSDMD-208	ENST00000528475	LIN7A	O14910	233 aa	Predicted RBP	24.37	■■□□□ 1.49
GSDMD-208	ENST00000528475	CCDC22	O60826	627 aa		24.37	■■□□□ 1.49
GSDMD-208	ENST00000528475	HAUS5	O94927	633 aa		24.37	■■□□□ 1.49
GSDMD-208	ENST00000528475	LMNA	P02545	664 aa	Known RBP	24.37	■■□□□ 1.49
GSDMD-208	ENST00000528475	MCF2	P10911	925 aa		24.37	■■□□□ 1.49
GSDMD-208	ENST00000528475	MAGEA6	P43360	314 aa		24.37	■■□□□ 1.49
GSDMD-208	ENST00000528475	NRL	P54845	237 aa		24.37	■■□□□ 1.49
GSDMD-208	ENST00000528475	CDK16	Q00536	496 aa		24.37	■■□□□ 1.49
GSDMD-208	ENST00000528475	POU5F1B	Q06416	359 aa		24.37	■■□□□ 1.49
GSDMD-208	ENST00000528475	PDK2	Q15119	407 aa		24.37	■■□□□ 1.49
GSDMD-208	ENST00000528475	TTC39B	Q5VTQ0	682 aa	Predicted RBP	24.37	■■□□□ 1.49
GSDMD-208	ENST00000528475	SLC26A11	Q86WA9	606 aa		24.37	■■□□□ 1.49
GSDMD-208	ENST00000528475	CDR2L	Q86X02	465 aa	Predicted RBP	24.37	■■□□□ 1.49
GSDMD-208	ENST00000528475	LRRC6	Q86X45	466 aa		24.37	■■□□□ 1.49
GSDMD-208	ENST00000528475	RXFP2	Q8WXD0	754 aa		24.37	■■□□□ 1.49
GSDMD-208	ENST00000528475	APBB2	Q92870	758 aa		24.37	■■□□□ 1.49
GSDMD-208	ENST00000528475	MINDY3	Q9H8M7	445 aa		24.37	■■□□□ 1.49
GSDMD-208	ENST00000528475	KCNK13	Q9HB14	408 aa		24.37	■■□□□ 1.49
GSDMD-208	ENST00000528475	HEY2	Q9UBP5	337 aa		24.37	■■□□□ 1.49
GSDMD-208	ENST00000528475	KIAA1257	Q9ULG3	409 aa		24.37	■■□□□ 1.49
GSDMD-208	ENST00000528475	HBP1	O60381	514 aa		24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	STAG3L1	P0CL83	205 aa		24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	TGM2	P21980	687 aa		24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	YWHAG	P61981	247 aa	Known RBP eCLIP	24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	INCA1	Q0VD86	236 aa		24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	MTM1	Q13496	603 aa		24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	FAM91A1	Q658Y4	838 aa		24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	TRNP1	Q6NT89	227 aa		24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	ZC3H18	Q86VM9	953 aa	Known RBP	24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	MAP7D3	Q8IWC1	876 aa		24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	NUDCD1	Q96RS6	583 aa		24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	TTLL3	Q9Y4R7	772 aa		24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475		H7C0C1	242 aa		24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	USP2	O75604	605 aa	Predicted RBP	24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	LUC7L3	O95232	432 aa	Known RBP	24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	GJB1	P08034	283 aa		24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	ATP5O	P48047	213 aa		24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	YWHAZ	P63104	245 aa	Known RBP	24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	EFCAB12	Q6NXP0	572 aa		24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	TTC39C	Q8N584	583 aa		24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	TRPM4	Q8TD43	1214 aa		24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	HEXIM2	Q96MH2	286 aa	Known RBP	24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	FAM111A	Q96PZ2	611 aa		24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	SMARCAD1	Q9H4L7	1026 aa		24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	DENND2D	Q9H6A0	471 aa	Predicted RBP	24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	GGA3	Q9NZ52	723 aa		24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	BARX2	Q9UMQ3	279 aa	Predicted RBP	24.36	■■□□□ 1.49
GSDMD-208	ENST00000528475	DPYSL4	O14531	572 aa		24.35	■■□□□ 1.49
GSDMD-208	ENST00000528475	TRDMT1	O14717	391 aa	Known RBP	24.35	■■□□□ 1.49
GSDMD-208	ENST00000528475	PRPSAP2	O60256	369 aa		24.35	■■□□□ 1.49
GSDMD-208	ENST00000528475	GSTA2	P09210	222 aa		24.35	■■□□□ 1.49
GSDMD-208	ENST00000528475	DLD	P09622	509 aa	Known RBP	24.35	■■□□□ 1.49
GSDMD-208	ENST00000528475	PYGB	P11216	843 aa		24.35	■■□□□ 1.49

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms