RNA–Protein interactions for RNA: ENST00000527959.1

BBS1-213, Transcript of Bardet-Biedl syndrome 1, human

TSL 2

Gene BBS1, Length 734 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-213	ENST00000527959	TAF4B	Q92750	862 aa		13.95	□□□□□ -0.18
BBS1-213	ENST00000527959	OTUB2	Q96DC9	234 aa		13.95	□□□□□ -0.18
BBS1-213	ENST00000527959	SMYD3	Q9H7B4	428 aa		13.95	□□□□□ -0.18
BBS1-213	ENST00000527959	EXOC1	Q9NV70	894 aa		13.95	□□□□□ -0.18
BBS1-213	ENST00000527959	MMP17	Q9ULZ9	603 aa		13.95	□□□□□ -0.18
BBS1-213	ENST00000527959	CNOT1	A5YKK6	2376 aa	Known RBP	13.95	□□□□□ -0.18
BBS1-213	ENST00000527959	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	MAPK13	O15264	365 aa		13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	RHOBTB1	O94844	696 aa		13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	ABL1	P00519	1130 aa		13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	ZDHHC11B	P0C7U3	371 aa		13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	CHRM1	P11229	460 aa	Predicted RBP	13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	P4HA1	P13674	534 aa		13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	MRPS21	P82921	87 aa	Known RBP	13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	ELF2	Q15723	593 aa		13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	ZACN	Q401N2	412 aa		13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	KMT5B	Q4FZB7	885 aa		13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	HSF5	Q4G112	596 aa	Predicted RBP	13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	AASDH	Q4L235	1098 aa	Predicted RBP	13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	PPM1J	Q5JR12	505 aa		13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	FAM35A	Q86V20	835 aa		13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	C11orf74	Q86VG3	221 aa		13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	UNC93A	Q86WB7	457 aa		13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	FUK	Q8N0W3	1084 aa		13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	C12orf50	Q8NA57	414 aa	Predicted RBP	13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	FBXO32	Q969P5	355 aa		13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	SMARCD1	Q96GM5	515 aa		13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	ZFR	Q96KR1	1074 aa	Known RBP	13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	PNKP	Q96T60	521 aa		13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	SDCBP2	Q9H190	292 aa		13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	CSNK1G1	Q9HCP0	422 aa		13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	DMAP1	Q9NPF5	467 aa	Predicted RBP	13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	VPS45	Q9NRW7	570 aa		13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	SMPD4	Q9NXE4	827 aa		13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	CFAP97	Q9P2B7	532 aa		13.94	□□□□□ -0.18
BBS1-213	ENST00000527959	COCH	O43405	550 aa		13.93	□□□□□ -0.18
BBS1-213	ENST00000527959	ADH1C	P00326	375 aa		13.93	□□□□□ -0.18
BBS1-213	ENST00000527959	ASS1	P00966	412 aa	Known RBP	13.93	□□□□□ -0.18
BBS1-213	ENST00000527959	NR3C1	P04150	777 aa		13.93	□□□□□ -0.18
BBS1-213	ENST00000527959	MBL2	P11226	248 aa	Predicted RBP	13.93	□□□□□ -0.18
BBS1-213	ENST00000527959	PFKFB1	P16118	471 aa		13.93	□□□□□ -0.18
BBS1-213	ENST00000527959	MPL	P40238	635 aa		13.93	□□□□□ -0.18
BBS1-213	ENST00000527959	DGKE	P52429	567 aa		13.93	□□□□□ -0.18
BBS1-213	ENST00000527959	SLC5A3	P53794	718 aa		13.93	□□□□□ -0.18
BBS1-213	ENST00000527959	DLG4	P78352	724 aa		13.93	□□□□□ -0.18
BBS1-213	ENST00000527959	CRY1	Q16526	586 aa		13.93	□□□□□ -0.18
BBS1-213	ENST00000527959	USP39	Q53GS9	565 aa	Known RBP	13.93	□□□□□ -0.18
BBS1-213	ENST00000527959	C2orf27A	Q580R0	203 aa		13.93	□□□□□ -0.18
BBS1-213	ENST00000527959	HECTD3	Q5T447	861 aa		13.93	□□□□□ -0.18
BBS1-213	ENST00000527959	TSTD1	Q8NFU3	115 aa		13.93	□□□□□ -0.18
BBS1-213	ENST00000527959	SCAMP5	Q8TAC9	235 aa		13.93	□□□□□ -0.18
BBS1-213	ENST00000527959	CNOT6L	Q96LI5	555 aa	Known RBP	13.93	□□□□□ -0.18
BBS1-213	ENST00000527959	CHORDC1	Q9UHD1	332 aa	Predicted RBP	13.93	□□□□□ -0.18
BBS1-213	ENST00000527959	TRAF3IP3	Q9Y228	551 aa		13.93	□□□□□ -0.18
BBS1-213	ENST00000527959	HPSE	Q9Y251	543 aa		13.93	□□□□□ -0.18
BBS1-213	ENST00000527959	MYOF	Q9NZM1	2061 aa		13.93	□□□□□ -0.18
BBS1-213	ENST00000527959	FAM237A	A0A1B0GTK4	181 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	BCLAF3	A2AJT9	711 aa	Known RBP	13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	AP1G2	O75843	785 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	KAT7	O95251	611 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	GRIA2	P42262	883 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	TNFRSF4	P43489	277 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	SLC6A11	P48066	632 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	MCCD1	P59942	119 aa	Predicted RBP	13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	ENPEP	Q07075	957 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	MESP2	Q0VG99	397 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	CCDC6	Q16204	474 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	NFIL3	Q16649	462 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	C1orf220	Q5T0J3	134 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	IL31	Q6EBC2	164 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	SV2A	Q7L0J3	742 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	ACOT1	Q86TX2	421 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	IL17RC	Q8NAC3	791 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	ZMIZ2	Q8NF64	920 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	CNTNAP3B	Q96NU0	1288 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	SMO	Q99835	787 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	MED10	Q9BTT4	135 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	CNTNAP3	Q9BZ76	1288 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	FBXO44	Q9H4M3	255 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	RXFP3	Q9NSD7	469 aa		13.92	□□□□□ -0.18
BBS1-213	ENST00000527959	NUP205	Q92621	2012 aa		13.91	□□□□□ -0.18
BBS1-213	ENST00000527959		A0A1B0GVL5	298 aa		13.91	□□□□□ -0.18
BBS1-213	ENST00000527959	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.91	□□□□□ -0.18
BBS1-213	ENST00000527959	DCLK1	O15075	740 aa		13.91	□□□□□ -0.18
BBS1-213	ENST00000527959	RHOBTB3	O94955	611 aa		13.91	□□□□□ -0.18
BBS1-213	ENST00000527959	KIF20A	O95235	890 aa		13.91	□□□□□ -0.18
BBS1-213	ENST00000527959	APOD	P05090	189 aa		13.91	□□□□□ -0.18
BBS1-213	ENST00000527959	ADH5	P11766	374 aa		13.91	□□□□□ -0.18
BBS1-213	ENST00000527959	KIR2DL1	P43626	348 aa	Predicted RBP	13.91	□□□□□ -0.18
BBS1-213	ENST00000527959	ASPA	P45381	313 aa		13.91	□□□□□ -0.18
BBS1-213	ENST00000527959	NDST1	P52848	882 aa		13.91	□□□□□ -0.18
BBS1-213	ENST00000527959	SEC13	P55735	322 aa		13.91	□□□□□ -0.18
BBS1-213	ENST00000527959	GAD2	Q05329	585 aa		13.91	□□□□□ -0.18
BBS1-213	ENST00000527959	IFRD2	Q12894	506 aa	Predicted RBP	13.91	□□□□□ -0.18
BBS1-213	ENST00000527959	STPG1	Q5TH74	334 aa		13.91	□□□□□ -0.18
BBS1-213	ENST00000527959	PMS2CL	Q68D20	193 aa		13.91	□□□□□ -0.18
BBS1-213	ENST00000527959	SCARA5	Q6ZMJ2	495 aa		13.91	□□□□□ -0.18
BBS1-213	ENST00000527959	ETFBKMT	Q8IXQ9	262 aa		13.91	□□□□□ -0.18
BBS1-213	ENST00000527959	PHTF2	Q8N3S3	785 aa		13.91	□□□□□ -0.18
BBS1-213	ENST00000527959	OLIG1	Q8TAK6	271 aa		13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms