RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 LHX1P48742 406 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 IRX4P78413 519 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 MYO1EQ12965 1108 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 NR1H3Q13133 447 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 BECN1Q14457 450 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 FOXD4L6Q3SYB3 417 aaPredicted RBP10.57□□□□□ -0.72
CAPN1-210ENST00000527699 TMEM92Q6UXU6 159 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 FOXD4L3Q6VB84 417 aaPredicted RBP10.57□□□□□ -0.72
CAPN1-210ENST00000527699 CCNI2Q6ZMN8 369 aaPredicted RBP10.57□□□□□ -0.72
CAPN1-210ENST00000527699 SYT13Q7L8C5 426 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 C12orf40Q86WS4 652 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 NT5DC4Q86YG4 428 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 NELFCDQ8IXH7 590 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 TMEM86AQ8N2M4 240 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 PGBD3Q8N328 593 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 ALLCQ8N6M5 410 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 TOP6BLQ8N6T0 577 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 LRRC52Q8N7C0 313 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 NAT16Q8N8M0 369 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 FSIP1Q8NA03 581 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 LSM14AQ8ND56 463 aaKnown RBP10.57□□□□□ -0.72
CAPN1-210ENST00000527699 OR6B3Q8NGW1 331 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 USP33Q8TEY7 942 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 LEO1Q8WVC0 666 aaPredicted RBP10.57□□□□□ -0.72
CAPN1-210ENST00000527699 PIGKQ92643 395 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 ACDQ96AP0 544 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 TRMT2BQ96GJ1 504 aaKnown RBP10.57□□□□□ -0.72
CAPN1-210ENST00000527699 USP28Q96RU2 1077 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 TMEM206Q9H813 350 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 GDAP2Q9NXN4 497 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 TRPM5Q9NZQ8 1165 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 SRPRBQ9Y5M8 271 aaKnown RBP10.57□□□□□ -0.72
CAPN1-210ENST00000527699 CPQQ9Y646 472 aa10.57□□□□□ -0.72
CAPN1-210ENST00000527699 COL6A6A6NMZ7 2263 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 PTPRQQ9UMZ3 2332 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 THADAQ6YHU6 1953 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 F8VP50 259 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 GABRDO14764 452 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 NFATC1O95644 943 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 CYP17A1P05093 508 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 MBL2P11226 248 aaPredicted RBP10.56□□□□□ -0.72
CAPN1-210ENST00000527699 CYP2J2P51589 502 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 FAM193AP78312 1265 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 CYP4F3Q08477 520 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 ORC1Q13415 861 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 NFKBIBQ15653 356 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 GAB4Q2WGN9 574 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 FBXO43Q4G163 708 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 USP39Q53GS9 565 aaKnown RBP10.56□□□□□ -0.72
CAPN1-210ENST00000527699 FAM171BQ6P995 826 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 C4orf50Q6ZRC1 276 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 CYP2U1Q7Z449 544 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 HDDC3Q8N4P3 179 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 PNPLA1Q8N8W4 532 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 TXNDC5Q8NBS9 432 aaKnown RBP10.56□□□□□ -0.72
CAPN1-210ENST00000527699 MDGA1Q8NFP4 955 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 CCDC127Q96BQ5 260 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 DHX58Q96C10 678 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 PCED1BQ96HM7 432 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 MYRFLQ96LU7 910 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 ZNF518BQ9C0D4 1074 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 SNX25Q9H3E2 840 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 UPF2Q9HAU5 1272 aaKnown RBP10.56□□□□□ -0.72
CAPN1-210ENST00000527699 ABCB6Q9NP58 842 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 INTS13Q9NVM9 706 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 HSPBP1Q9NZL4 362 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 BCCIPQ9P287 314 aaKnown RBP eCLIP10.56□□□□□ -0.72
CAPN1-210ENST00000527699 CFAP97Q9P2B7 532 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 TFIP11Q9UBB9 837 aaKnown RBP10.56□□□□□ -0.72
CAPN1-210ENST00000527699 SEL1LQ9UBV2 794 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 CDH9Q9ULB4 789 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 DENND4CQ5VZ89 1909 aa10.56□□□□□ -0.72
CAPN1-210ENST00000527699 ABCA7Q8IZY2 2146 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 CREBBPQ92793 2442 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 CCDC163A0A0D9SF12 145 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 ZNF233A6NK53 670 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 SGK1O00141 431 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 TNNI1P19237 187 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 HOXD13P35453 343 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 GNL1P36915 607 aaPredicted RBP10.55□□□□□ -0.72
CAPN1-210ENST00000527699 ATXN3P54252 364 aaPredicted RBP10.55□□□□□ -0.72
CAPN1-210ENST00000527699 LMAN2Q12907 356 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 TAF10Q12962 218 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 DHCR24Q15392 516 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 CFAP221Q4G0U5 840 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 TAF1BQ53T94 588 aaPredicted RBP10.55□□□□□ -0.72
CAPN1-210ENST00000527699 SCARA5Q6ZMJ2 495 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 DENND5BQ6ZUT9 1274 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 TRAPPC11Q7Z392 1133 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 SCUBE3Q8IX30 993 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 CCDC65Q8IXS2 484 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 HMGB4Q8WW32 186 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 WBP2Q969T9 261 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 EXOC4Q96A65 974 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 FCRL3Q96P31 734 aaPredicted RBP10.55□□□□□ -0.72
CAPN1-210ENST00000527699 MED10Q9BTT4 135 aa10.55□□□□□ -0.72
CAPN1-210ENST00000527699 NUSAP1Q9BXS6 441 aaKnown RBP10.55□□□□□ -0.72
CAPN1-210ENST00000527699 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.55□□□□□ -0.722e-14■■■■■ 49.7
CAPN1-210ENST00000527699 TMEM30AQ9NV96 361 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms