RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 SLC20A2Q08357 652 aa18.09■□□□□ 0.49
PCDHA6-202ENST00000527624 NOGQ13253 232 aa18.09■□□□□ 0.49
PCDHA6-202ENST00000527624 TAZQ16635 292 aa18.09■□□□□ 0.49
PCDHA6-202ENST00000527624 TOP6BLQ8N6T0 577 aa18.09■□□□□ 0.49
PCDHA6-202ENST00000527624 B3GALNT2Q8NCR0 500 aa18.09■□□□□ 0.49
PCDHA6-202ENST00000527624 KLHDC9Q8NEP7 349 aa18.09■□□□□ 0.49
PCDHA6-202ENST00000527624 SLC35B2Q8TB61 432 aa18.09■□□□□ 0.49
PCDHA6-202ENST00000527624 STK32AQ8WU08 396 aa18.09■□□□□ 0.49
PCDHA6-202ENST00000527624 FAM172AQ8WUF8 416 aa18.09■□□□□ 0.49
PCDHA6-202ENST00000527624 PPM1EQ8WY54 764 aa18.09■□□□□ 0.49
PCDHA6-202ENST00000527624 NKD2Q969F2 451 aaPredicted RBP18.09■□□□□ 0.49
PCDHA6-202ENST00000527624 TNIP3Q96KP6 325 aa18.09■□□□□ 0.49
PCDHA6-202ENST00000527624 PPANQ9NQ55 473 aaKnown RBP18.09■□□□□ 0.49
PCDHA6-202ENST00000527624 TRMT13Q9NUP7 481 aaKnown RBP18.09■□□□□ 0.49
PCDHA6-202ENST00000527624 GPATCH2LQ9NWQ4 482 aa18.09■□□□□ 0.49
PCDHA6-202ENST00000527624 A0A087WUV0 522 aaPredicted RBP18.08■□□□□ 0.49
PCDHA6-202ENST00000527624 TLDC2A0PJX2 215 aa18.08■□□□□ 0.49
PCDHA6-202ENST00000527624 ARL5CA6NH57 179 aa18.08■□□□□ 0.49
PCDHA6-202ENST00000527624 CLDN5O00501 218 aa18.08■□□□□ 0.49
PCDHA6-202ENST00000527624 TFE3P19532 575 aaPredicted RBP18.08■□□□□ 0.49
PCDHA6-202ENST00000527624 WARSP23381 471 aaKnown RBP18.08■□□□□ 0.49
PCDHA6-202ENST00000527624 SCNN1GP51170 649 aa18.08■□□□□ 0.49
PCDHA6-202ENST00000527624 NKX3-2P78367 333 aa18.08■□□□□ 0.49
PCDHA6-202ENST00000527624 GPS1Q13098 491 aa18.08■□□□□ 0.49
PCDHA6-202ENST00000527624 CCSAPQ6IQ19 270 aaPredicted RBP18.08■□□□□ 0.49
PCDHA6-202ENST00000527624 HACE1Q8IYU2 909 aa18.08■□□□□ 0.49
PCDHA6-202ENST00000527624 CHST12Q9NRB3 414 aa18.08■□□□□ 0.49
PCDHA6-202ENST00000527624 PADI3Q9ULW8 664 aa18.08■□□□□ 0.49
PCDHA6-202ENST00000527624 EFR3BQ9Y2G0 817 aa18.08■□□□□ 0.49
PCDHA6-202ENST00000527624 ATXN2Q99700 1313 aaKnown RBP18.08■□□□□ 0.48
PCDHA6-202ENST00000527624 GPR182O15218 404 aa18.08■□□□□ 0.48
PCDHA6-202ENST00000527624 TRAPPC3O43617 180 aa18.08■□□□□ 0.48
PCDHA6-202ENST00000527624 THP07101 528 aa18.08■□□□□ 0.48
PCDHA6-202ENST00000527624 PECAM1P16284 738 aaPredicted RBP18.08■□□□□ 0.48
PCDHA6-202ENST00000527624 CLCNKBP51801 687 aa18.08■□□□□ 0.48
PCDHA6-202ENST00000527624 CAV1Q03135 178 aa18.08■□□□□ 0.48
PCDHA6-202ENST00000527624 AGMOQ6ZNB7 445 aa18.08■□□□□ 0.48
PCDHA6-202ENST00000527624 PGM2Q96G03 612 aa18.08■□□□□ 0.48
PCDHA6-202ENST00000527624 SLC38A7Q9NVC3 462 aa18.08■□□□□ 0.48
PCDHA6-202ENST00000527624 DRG1Q9Y295 367 aaKnown RBP18.08■□□□□ 0.48
PCDHA6-202ENST00000527624 TIMM13Q9Y5L4 95 aaPredicted RBP18.08■□□□□ 0.48
PCDHA6-202ENST00000527624 GMNCA6NCL1 334 aa18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 CASTOR2A6NHX0 329 aa18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 DPYSL4O14531 572 aa18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 MGEA5O60502 916 aa18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 ITGAVP06756 1048 aa18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 SLCO1A2P46721 670 aa18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 SNX16P57768 344 aa18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 ZC3H12AQ5D1E8 599 aaKnown RBP18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 ADAM7Q9H2U9 754 aa18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 NOD1Q9Y239 953 aa18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 GDF10P55107 478 aa18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 KRT81Q14533 505 aa18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 HIBCHQ6NVY1 386 aaPredicted RBP18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 TRMT10CQ7L0Y3 403 aaKnown RBP18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 TADA2BQ86TJ2 420 aa18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 FUKQ8N0W3 1084 aa18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 BBOF1Q8ND07 529 aa18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 C3orf58Q8NDZ4 430 aa18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 EPS8L3Q8TE67 593 aaKnown RBP18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 NDRG1Q92597 394 aaKnown RBP18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 SENP8Q96LD8 212 aa18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 PAAF1Q9BRP4 392 aa18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 CNOT10Q9H9A5 744 aaKnown RBP18.07■□□□□ 0.48
PCDHA6-202ENST00000527624 DPYSL3Q14195 570 aa18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 KIAA0319Q5VV43 1072 aa18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 NPNTQ6UXI9 565 aa18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 RPAINQ86UA6 219 aa18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 ZDHHC17Q8IUH5 632 aa18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 CCHCR1Q8TD31 782 aa18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 CAPNS2Q96L46 248 aa18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 MAK16Q9BXY0 300 aaKnown RBP18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 ADAM33Q9BZ11 813 aa18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 DNAI2Q9GZS0 605 aa18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 RSAD1Q9HA92 442 aa18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 BEST1O76090 585 aa18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 PTPN1P18031 435 aaKnown RBP18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 ATXN1P54253 815 aaKnown RBP18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 HDAC4P56524 1084 aa18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 ITGA7Q13683 1181 aa18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 LPIN1Q14693 890 aa18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 KYNUQ16719 465 aa18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 MDH1BQ5I0G3 518 aa18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 MICALCLQ6ZW33 695 aa18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 PIGZQ86VD9 579 aa18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 TTC13Q8NBP0 860 aa18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 DDX43Q9NXZ2 648 aaKnown RBP18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 GGA2Q9UJY4 613 aa18.06■□□□□ 0.48
PCDHA6-202ENST00000527624 APOC4-APOC2K7ER74 178 aa18.05■□□□□ 0.48
PCDHA6-202ENST00000527624 DNALI1O14645 258 aaPredicted RBP18.05■□□□□ 0.48
PCDHA6-202ENST00000527624 APOC2P02655 101 aa18.05■□□□□ 0.48
PCDHA6-202ENST00000527624 CA9Q16790 459 aa18.05■□□□□ 0.48
PCDHA6-202ENST00000527624 SLC26A9Q7LBE3 791 aa18.05■□□□□ 0.48
PCDHA6-202ENST00000527624 TAB3Q8N5C8 712 aaPredicted RBP18.05■□□□□ 0.48
PCDHA6-202ENST00000527624 CD99L2Q8TCZ2 262 aa18.05■□□□□ 0.48
PCDHA6-202ENST00000527624 HNRNPABQ99729 332 aaKnown RBP18.05■□□□□ 0.48
PCDHA6-202ENST00000527624 MED10Q9BTT4 135 aa18.05■□□□□ 0.48
PCDHA6-202ENST00000527624 SNRNP25Q9BV90 132 aaKnown RBP18.05■□□□□ 0.48
PCDHA6-202ENST00000527624 TMEM109Q9BVC6 243 aa18.05■□□□□ 0.48
PCDHA6-202ENST00000527624 GIT1Q9Y2X7 761 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms