RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 OTOFQ9HC10 1997 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 SOWAHBA6NEL2 793 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 H3BRJ5 948 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 COPEO14579 308 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 BAG2O95816 211 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 PSAPP07602 524 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 NRLP54845 237 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 PRKCEQ02156 737 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 HADHQ16836 314 aaKnown RBP13.04□□□□□ -0.32
CAPN1-208ENST00000527323 KBTBD12Q3ZCT8 623 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 ALYREFQ86V81 257 aaKnown RBP13.04□□□□□ -0.32
CAPN1-208ENST00000527323 TTC13Q8NBP0 860 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 KCTD6Q8NC69 237 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 CFAP61Q8NHU2 1237 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 CCDC110Q8TBZ0 833 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 NMUR2Q9GZQ4 415 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 KCNK13Q9HB14 408 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.04□□□□□ -0.32
CAPN1-208ENST00000527323 RANBP2P49792 3224 aaKnown RBP13.04□□□□□ -0.32
CAPN1-208ENST00000527323 I3L4J1 428 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 AP1G2O75843 785 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 TMEM63AO94886 807 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 SNUPNO95149 360 aaKnown RBP13.04□□□□□ -0.32
CAPN1-208ENST00000527323 CST3P01034 146 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-208ENST00000527323 KITP10721 976 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 CD19P15391 556 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 CACNA2D1P54289 1103 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 EIF3EP60228 445 aaKnown RBP13.04□□□□□ -0.32
CAPN1-208ENST00000527323 CLDN10P78369 228 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 OCRLQ01968 901 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 KDSRQ06136 332 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 SNAPC2Q13487 334 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 C6orf163Q5TEZ5 329 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 SCARA5Q6ZMJ2 495 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 SMC1BQ8NDV3 1235 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 FAM136AQ96C01 138 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 MS4A4AQ96JQ5 239 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 FETUBQ9UGM5 382 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 FBXO40Q9UH90 709 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 WASF2Q9Y6W5 498 aa13.04□□□□□ -0.32
CAPN1-208ENST00000527323 ZNFX1Q9P2E3 1918 aaKnown RBP13.03□□□□□ -0.32
CAPN1-208ENST00000527323 ITGBL1O95965 494 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-208ENST00000527323 DLDP09622 509 aaKnown RBP13.03□□□□□ -0.32
CAPN1-208ENST00000527323 WEE2P0C1S8 567 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 RFC1P35251 1148 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-208ENST00000527323 SERPINB4P48594 390 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 C11orf91Q3C1V1 193 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 LDLRAD1Q5T700 205 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 SLFN12LQ6IEE8 588 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 APLFQ8IW19 511 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-208ENST00000527323 PPM1NQ8N819 430 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 SKA1Q96BD8 255 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 CFAP36Q96G28 342 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 APOPT1Q96IL0 206 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 CGRRF1Q99675 332 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 WDR83Q9BRX9 315 aaKnown RBP13.03□□□□□ -0.32
CAPN1-208ENST00000527323 CALN1Q9BXU9 219 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 STX18Q9P2W9 335 aaKnown RBP13.03□□□□□ -0.32
CAPN1-208ENST00000527323 CIB2O75838 187 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 LDHAP00338 332 aaKnown RBP13.03□□□□□ -0.32
CAPN1-208ENST00000527323 UBTFL6P0CB48 400 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-208ENST00000527323 RBP3P10745 1247 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 KRT3P12035 628 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 TMPRSS15P98073 1019 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 ENPEPQ07075 957 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 AP1B1Q10567 949 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 PRKD1Q15139 912 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-208ENST00000527323 ZC3H12AQ5D1E8 599 aaKnown RBP13.03□□□□□ -0.32
CAPN1-208ENST00000527323 IGDCC3Q8IVU1 814 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 RDM1Q8NG50 284 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 MZB1Q8WU39 189 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 HSPH1Q92598 858 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 GBP5Q96PP8 586 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 TTC1Q99614 292 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 DHRS4Q9BTZ2 278 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 SLC13A1Q9BZW2 595 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 HAPLN2Q9GZV7 340 aa13.03□□□□□ -0.32
CAPN1-208ENST00000527323 RBBP6Q7Z6E9 1792 aaKnown RBP13.02□□□□□ -0.32
CAPN1-208ENST00000527323 CCDC195A0A1B0GUA6 201 aa13.02□□□□□ -0.32
CAPN1-208ENST00000527323 KBTBD13C9JR72 458 aa13.02□□□□□ -0.32
CAPN1-208ENST00000527323 DNAJC6O75061 913 aa13.02□□□□□ -0.32
CAPN1-208ENST00000527323 ARIH2O95376 493 aa13.02□□□□□ -0.32
CAPN1-208ENST00000527323 KRT7P08729 469 aa13.02□□□□□ -0.32
CAPN1-208ENST00000527323 CD48P09326 243 aa13.02□□□□□ -0.32
CAPN1-208ENST00000527323 AMPD1P23109 780 aa13.02□□□□□ -0.32
CAPN1-208ENST00000527323 CCND2P30279 289 aa13.02□□□□□ -0.32
CAPN1-208ENST00000527323 TAP1Q03518 808 aa13.02□□□□□ -0.32
CAPN1-208ENST00000527323 PPIL2Q13356 520 aa13.02□□□□□ -0.32
CAPN1-208ENST00000527323 KRT72Q14CN4 511 aa13.02□□□□□ -0.32
CAPN1-208ENST00000527323 DARS2Q6PI48 645 aaKnown RBP13.02□□□□□ -0.32
CAPN1-208ENST00000527323 ZBTB33Q86T24 672 aa13.02□□□□□ -0.32
CAPN1-208ENST00000527323 CCDC60Q8IWA6 550 aaPredicted RBP13.02□□□□□ -0.32
CAPN1-208ENST00000527323 NSUN6Q8TEA1 469 aaKnown RBP13.02□□□□□ -0.32
CAPN1-208ENST00000527323 RILPQ96NA2 401 aa13.02□□□□□ -0.32
CAPN1-208ENST00000527323 THTPAQ9BU02 230 aa13.02□□□□□ -0.32
CAPN1-208ENST00000527323 TRIM4Q9C037 500 aa13.02□□□□□ -0.32
CAPN1-208ENST00000527323 MARCOQ9UEW3 520 aaPredicted RBP13.02□□□□□ -0.32
CAPN1-208ENST00000527323 PHIPQ8WWQ0 1821 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 TCRBV9S1A1TA0A576 114 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 MAGEA13PA6NCF6 341 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms