RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 TCEAL4Q96EI5 215 aa14.44□□□□□ -0.1
CD44-224ENST00000526669 HSFY1Q96LI6 401 aa14.44□□□□□ -0.1
CD44-224ENST00000526669 SLC4A5Q9BY07 1137 aa14.44□□□□□ -0.1
CD44-224ENST00000526669 UBE2ZQ9H832 354 aaPredicted RBP14.44□□□□□ -0.1
CD44-224ENST00000526669 PNPLA8Q9NP80 782 aa14.44□□□□□ -0.1
CD44-224ENST00000526669 ASAH2Q9NR71 780 aa14.44□□□□□ -0.1
CD44-224ENST00000526669 GMIPQ9P107 970 aa14.44□□□□□ -0.1
CD44-224ENST00000526669 DNMT3BQ9UBC3 853 aaKnown RBP14.44□□□□□ -0.1
CD44-224ENST00000526669 GOLGA8SH3BPF8 625 aa14.43□□□□□ -0.1
CD44-224ENST00000526669 PAPSS1O43252 624 aaPredicted RBP14.43□□□□□ -0.1
CD44-224ENST00000526669 RHOP08100 348 aa14.43□□□□□ -0.1
CD44-224ENST00000526669 PTPN2P17706 415 aa14.43□□□□□ -0.1
CD44-224ENST00000526669 KCNA5P22460 613 aa14.43□□□□□ -0.1
CD44-224ENST00000526669 GABRR2P28476 465 aa14.43□□□□□ -0.1
CD44-224ENST00000526669 ACADSBP45954 432 aa14.43□□□□□ -0.1
CD44-224ENST00000526669 PGFP49763 221 aa14.43□□□□□ -0.1
CD44-224ENST00000526669 CYP4F8P98187 520 aa14.43□□□□□ -0.1
CD44-224ENST00000526669 CCDC173Q0VFZ6 552 aa14.43□□□□□ -0.1
CD44-224ENST00000526669 TAF10Q12962 218 aa14.43□□□□□ -0.1
CD44-224ENST00000526669 COL19A1Q14993 1142 aa14.43□□□□□ -0.1
CD44-224ENST00000526669 ALKBH5Q6P6C2 394 aaKnown RBP14.43□□□□□ -0.1
CD44-224ENST00000526669 RAD9BQ6WBX8 426 aa14.43□□□□□ -0.1
CD44-224ENST00000526669 RTL10Q7L3V2 364 aa14.43□□□□□ -0.1
CD44-224ENST00000526669 TMTC1Q8IUR5 882 aa14.43□□□□□ -0.1
CD44-224ENST00000526669 CMASQ8NFW8 434 aaPredicted RBP14.43□□□□□ -0.1
CD44-224ENST00000526669 MAFAQ8NHW3 353 aaPredicted RBP14.43□□□□□ -0.1
CD44-224ENST00000526669 ING5Q8WYH8 240 aa14.43□□□□□ -0.1
CD44-224ENST00000526669 PIWIL1Q96J94 861 aaKnown RBP14.43□□□□□ -0.1
CD44-224ENST00000526669 MSLNLQ96KJ4 702 aa14.43□□□□□ -0.1
CD44-224ENST00000526669 LRRC3Q9BY71 257 aa14.43□□□□□ -0.1
CD44-224ENST00000526669 UBXN6Q9BZV1 441 aa14.43□□□□□ -0.1
CD44-224ENST00000526669 PRDM6Q9NQX0 595 aa14.43□□□□□ -0.1
CD44-224ENST00000526669 ADAM22Q9P0K1 906 aa14.43□□□□□ -0.1
CD44-224ENST00000526669 CHORDC1Q9UHD1 332 aaPredicted RBP14.43□□□□□ -0.1
CD44-224ENST00000526669 ASB3Q9Y575 518 aa14.43□□□□□ -0.1
CD44-224ENST00000526669 A0A1W2PQH9 124 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 ZNF263O14978 683 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 RTN2O75298 545 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 TADA3O75528 432 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 GJB6O95452 261 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 ZBED1O96006 694 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 ABL1P00519 1130 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 FTLP02792 175 aaPredicted RBP14.42□□□□□ -0.1
CD44-224ENST00000526669 HOXB8P17481 243 aaPredicted RBP14.42□□□□□ -0.1
CD44-224ENST00000526669 ABCB4P21439 1286 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 CYLC1P35663 651 aaPredicted RBP14.42□□□□□ -0.1
CD44-224ENST00000526669 CCR2P41597 374 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 DAOAP59103 153 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 PTP4A2Q12974 167 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 SLC18A3Q16572 532 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 SLC5A9Q2M3M2 681 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 PABPC1LQ4VXU2 614 aaKnown RBP14.42□□□□□ -0.1
CD44-224ENST00000526669 HFE2Q6ZVN8 426 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 MON1BQ7L1V2 547 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 GPR149Q86SP6 731 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 XYLT1Q86Y38 959 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 LRRC8AQ8IWT6 810 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 SCUBE3Q8IX30 993 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 MSANTD4Q8NCY6 345 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 STK32AQ8WU08 396 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 C18orf8Q96DM3 657 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 ZNF830Q96NB3 372 aaPredicted RBP14.42□□□□□ -0.1
CD44-224ENST00000526669 TTLL2Q9BWV7 592 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 PACSIN1Q9BY11 444 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 S1PR5Q9H228 398 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 FBXO44Q9H4M3 255 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 IL21Q9HBE4 155 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 CD207Q9UJ71 328 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 NAGPAQ9UK23 515 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 NENFQ9UMX5 172 aa14.42□□□□□ -0.1
CD44-224ENST00000526669 MIA3Q5JRA6 1907 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 A0A1W2PRU2 124 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 GRAP2O75791 330 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 POU2F2P09086 479 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 GZMAP12544 262 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 CEBPBP17676 345 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 MMP8P22894 467 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 RPL34P49207 117 aaKnown RBP14.41□□□□□ -0.1
CD44-224ENST00000526669 CCZ1BP86790 482 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 CCZ1P86791 482 aaPredicted RBP14.41□□□□□ -0.1
CD44-224ENST00000526669 CES5AQ6NT32 575 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 GAREM2Q75VX8 874 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 PDZD4Q76G19 769 aaPredicted RBP14.41□□□□□ -0.1
CD44-224ENST00000526669 BHLHA9Q7RTU4 235 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 TMEM110Q86TL2 294 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 PHF13Q86YI8 300 aaPredicted RBP14.41□□□□□ -0.1
CD44-224ENST00000526669 MCOLN2Q8IZK6 566 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 ACRBPQ8NEB7 543 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 SHKBP1Q8TBC3 707 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 FAM149B1Q96BN6 582 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 ZNF653Q96CK0 615 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 TRMT2BQ96GJ1 504 aaKnown RBP14.41□□□□□ -0.1
CD44-224ENST00000526669 CEP295NLQ96MC4 621 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 SLITRK1Q96PX8 696 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 PPP1R9BQ96SB3 815 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 ATXN3LQ9H3M9 355 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 NMUR1Q9HB89 426 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 CYLDQ9NQC7 956 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 IL37Q9NZH6 218 aa14.41□□□□□ -0.1
CD44-224ENST00000526669 MYO1AQ9UBC5 1043 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms