RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 SCAMP5Q8TAC9 235 aa19.51■□□□□ 0.71
TSPAN4-216ENST00000526055 ECT2Q9H8V3 914 aa19.51■□□□□ 0.71
TSPAN4-216ENST00000526055 PCDHGA2Q9Y5H1 932 aa19.51■□□□□ 0.71
TSPAN4-216ENST00000526055 PRR23AA6NEV1 266 aa19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 LEFTY2O00292 366 aa19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 BIN1O00499 593 aa19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 SLC9A3R1O14745 358 aaPredicted RBP19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 NFATC1O95644 943 aa19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 FGFR1OPO95684 399 aaKnown RBP19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 ARSAP15289 507 aa19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 ADORA2BP29275 332 aa19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 FMO5P49326 533 aa19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 MARSP56192 900 aaKnown RBP19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 CSTF1Q05048 431 aaKnown RBP19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 GRSF1Q12849 480 aaKnown RBP eCLIP19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 IFRD2Q12894 506 aaPredicted RBP19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 CCINQ13939 588 aa19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 PON2Q15165 354 aa19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 EML3Q32P44 896 aa19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 TMEM196Q5HYL7 178 aa19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 TRIM68Q6AZZ1 485 aa19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 CLEC20AQ6ZU45 233 aa19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 TTC8Q8TAM2 541 aa19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 NELL1Q92832 810 aa19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 TMEM176AQ96HP8 235 aa19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 RNF38Q9H0F5 515 aa19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 CPQQ9Y646 472 aa19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 PATJQ8NI35 1801 aa19.5■□□□□ 0.71
TSPAN4-216ENST00000526055 BEST1O76090 585 aa19.49■□□□□ 0.71
TSPAN4-216ENST00000526055 PAPSS2O95340 614 aaPredicted RBP19.49■□□□□ 0.71
TSPAN4-216ENST00000526055 NRLP54845 237 aa19.49■□□□□ 0.71
TSPAN4-216ENST00000526055 CUL2Q13617 745 aa19.49■□□□□ 0.71
TSPAN4-216ENST00000526055 CLEC17AQ6ZS10 378 aa19.49■□□□□ 0.71
TSPAN4-216ENST00000526055 TATDN2Q93075 761 aa19.49■□□□□ 0.71
TSPAN4-216ENST00000526055 HEXIM2Q96MH2 286 aaKnown RBP19.49■□□□□ 0.71
TSPAN4-216ENST00000526055 DUSP16Q9BY84 665 aa19.49■□□□□ 0.71
TSPAN4-216ENST00000526055 UBXN6Q9BZV1 441 aa19.49■□□□□ 0.71
TSPAN4-216ENST00000526055 TLR8Q9NR97 1041 aaKnown RBP19.49■□□□□ 0.71
TSPAN4-216ENST00000526055 ZSCAN32Q9NX65 697 aa19.49■□□□□ 0.71
TSPAN4-216ENST00000526055 CHORDC1Q9UHD1 332 aaPredicted RBP19.49■□□□□ 0.71
TSPAN4-216ENST00000526055 CTNND2Q9UQB3 1225 aa19.49■□□□□ 0.71
TSPAN4-216ENST00000526055 SCML2Q9UQR0 700 aa19.49■□□□□ 0.71
TSPAN4-216ENST00000526055 WNT6Q9Y6F9 365 aa19.49■□□□□ 0.71
TSPAN4-216ENST00000526055 DMDP11532 3685 aa19.49■□□□□ 0.71
TSPAN4-216ENST00000526055 OTOL1A6NHN0 477 aaPredicted RBP19.48■□□□□ 0.71
TSPAN4-216ENST00000526055 HHLA1C9JL84 531 aa19.48■□□□□ 0.71
TSPAN4-216ENST00000526055 MBL2P11226 248 aaPredicted RBP19.48■□□□□ 0.71
TSPAN4-216ENST00000526055 DRD1P21728 446 aa19.48■□□□□ 0.71
TSPAN4-216ENST00000526055 GJA4P35212 333 aa19.48■□□□□ 0.71
TSPAN4-216ENST00000526055 CXCL12P48061 93 aa19.48■□□□□ 0.71
TSPAN4-216ENST00000526055 RAD23BP54727 409 aa19.48■□□□□ 0.71
TSPAN4-216ENST00000526055 ZXDBP98169 803 aa19.48■□□□□ 0.71
TSPAN4-216ENST00000526055 PPP1R26Q5T8A7 1209 aaPredicted RBP19.48■□□□□ 0.71
TSPAN4-216ENST00000526055 ARHGAP17Q68EM7 881 aa19.48■□□□□ 0.71
TSPAN4-216ENST00000526055 SLC4A11Q8NBS3 891 aa19.48■□□□□ 0.71
TSPAN4-216ENST00000526055 ZBTB44Q8NCP5 570 aa19.48■□□□□ 0.71
TSPAN4-216ENST00000526055 GMIPQ9P107 970 aa19.48■□□□□ 0.71
TSPAN4-216ENST00000526055 TBC1D14Q9P2M4 693 aa19.48■□□□□ 0.71
TSPAN4-216ENST00000526055 RIF1Q5UIP0 2472 aaKnown RBP19.48■□□□□ 0.71
TSPAN4-216ENST00000526055 HELZP42694 1942 aaKnown RBP19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 FAM186AA6NE01 2351 aa19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 E2F8A0AVK6 867 aa19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 COCHO43405 550 aa19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 LMNAP02545 664 aaKnown RBP19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 PSEN1P49768 467 aa19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 SLC8A3P57103 927 aa19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 FBXO43Q4G163 708 aa19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 ZNF394Q53GI3 561 aa19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 ASCL5Q7RTU5 278 aa19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 TRIM59Q8IWR1 403 aa19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 ATRIPQ8WXE1 791 aa19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 OTUB2Q96DC9 234 aa19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 CHFRQ96EP1 664 aa19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 NT5C1BQ96P26 610 aa19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 ARID3AQ99856 593 aa19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 P2RY13Q9BPV8 354 aa19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 CYLDQ9NQC7 956 aa19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 RWDD2AQ9UIY3 292 aa19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 KIAA1257Q9ULG3 409 aa19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 R4GN57 208 aa19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 FANCMQ8IYD8 2048 aa19.47■□□□□ 0.71
TSPAN4-216ENST00000526055 CCDC192P0DO97 292 aa19.46■□□□□ 0.71
TSPAN4-216ENST00000526055 TDGF1P13385 188 aa19.46■□□□□ 0.71
TSPAN4-216ENST00000526055 ACO1P21399 889 aaKnown RBP19.46■□□□□ 0.71
TSPAN4-216ENST00000526055 KIF11P52732 1056 aa19.46■□□□□ 0.71
TSPAN4-216ENST00000526055 GAS6Q14393 721 aa19.46■□□□□ 0.71
TSPAN4-216ENST00000526055 KLHDC10Q6PID8 442 aa19.46■□□□□ 0.71
TSPAN4-216ENST00000526055 CCDC186Q7Z3E2 898 aa19.46■□□□□ 0.71
TSPAN4-216ENST00000526055 ZNF276Q8N554 614 aa19.46■□□□□ 0.71
TSPAN4-216ENST00000526055 ANKRD52Q8NB46 1076 aa19.46■□□□□ 0.71
TSPAN4-216ENST00000526055 TTC16Q8NEE8 873 aa19.46■□□□□ 0.71
TSPAN4-216ENST00000526055 CCDC26Q8TAB7 109 aa19.46■□□□□ 0.71
TSPAN4-216ENST00000526055 SRRTQ9BXP5 876 aaKnown RBP19.46■□□□□ 0.71
TSPAN4-216ENST00000526055 RBM12Q9NTZ6 932 aaKnown RBP19.46■□□□□ 0.71
TSPAN4-216ENST00000526055 SMPD4Q9NXE4 827 aa19.46■□□□□ 0.71
TSPAN4-216ENST00000526055 CFAP97Q9P2B7 532 aa19.46■□□□□ 0.71
TSPAN4-216ENST00000526055 USP3Q9Y6I4 520 aa19.46■□□□□ 0.71
TSPAN4-216ENST00000526055 PTPRZ1P23471 2315 aaPredicted RBP19.45■□□□□ 0.7
TSPAN4-216ENST00000526055 MYH10P35580 1976 aa19.45■□□□□ 0.7
TSPAN4-216ENST00000526055 TLR5O60602 858 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms