RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ZBED3Q96IU2 234 aaPredicted RBP5.18□□□□□ -1.58
USP48-211ENST00000526044 IDI2Q9BXS1 227 aa5.18□□□□□ -1.58
USP48-211ENST00000526044 LSG1Q9H089 658 aaKnown RBP5.18□□□□□ -1.58
USP48-211ENST00000526044 NAPBQ9H115 298 aa5.18□□□□□ -1.58
USP48-211ENST00000526044 IL25Q9H293 177 aa5.18□□□□□ -1.58
USP48-211ENST00000526044 TAF1DQ9H5J8 278 aaPredicted RBP5.18□□□□□ -1.58
USP48-211ENST00000526044 VEZTQ9HBM0 779 aa5.18□□□□□ -1.58
USP48-211ENST00000526044 MCM9Q9NXL9 1143 aa5.18□□□□□ -1.58
USP48-211ENST00000526044 FAM30AQ9NZY2 134 aa5.18□□□□□ -1.58
USP48-211ENST00000526044 MAST2Q6P0Q8 1798 aa5.18□□□□□ -1.58
USP48-211ENST00000526044 MYH1P12882 1939 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 ADAMTSL1Q8N6G6 1762 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 AHRRA9YTQ3 701 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 SGTAO43765 313 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 SLC3A2P08195 630 aaKnown RBP5.17□□□□□ -1.58
USP48-211ENST00000526044 ZKSCAN1P17029 563 aaPredicted RBP5.17□□□□□ -1.58
USP48-211ENST00000526044 CACNB3P54284 484 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 RNASE9P60153 205 aaKnown RBP5.17□□□□□ -1.58
USP48-211ENST00000526044 CDC42EP1Q00587 391 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 TNFAIP1Q13829 316 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 UBXN2BQ14CS0 331 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 IMMTQ16891 758 aaKnown RBP5.17□□□□□ -1.58
USP48-211ENST00000526044 C3orf36Q3SXR2 165 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 SBK1Q52WX2 424 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 TMEM240Q5SV17 173 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 C12orf60Q5U649 245 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 CTR9Q6PD62 1173 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 SEM1Q6ZVN7 128 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 GDF7Q7Z4P5 450 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 APOBEC3FQ8IUX4 373 aaKnown RBP5.17□□□□□ -1.58
USP48-211ENST00000526044 CPA6Q8N4T0 437 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 MORC4Q8TE76 937 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 SLC46A2Q9BY10 475 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 C22orf23Q9BZE7 217 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 DHX36Q9H2U1 1008 aaKnown RBP5.17□□□□□ -1.58
USP48-211ENST00000526044 SLC2A4RGQ9NR83 387 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 TRPM5Q9NZQ8 1165 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 PI4KBQ9UBF8 816 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.17□□□□□ -1.58
USP48-211ENST00000526044 PGAP2Q9UHJ9 254 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 LUC7L2Q9Y383 392 aaKnown RBP5.17□□□□□ -1.58
USP48-211ENST00000526044 REXO2Q9Y3B8 237 aaKnown RBP5.17□□□□□ -1.58
USP48-211ENST00000526044 CDK5RAP2Q96SN8 1893 aa5.17□□□□□ -1.58
USP48-211ENST00000526044 BAZ2AQ9UIF9 1905 aaKnown RBP5.17□□□□□ -1.58
USP48-211ENST00000526044 NARSO43776 548 aaKnown RBP5.16□□□□□ -1.58
USP48-211ENST00000526044 PPFIA4O75335 1185 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 ZNF202O95125 648 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 ZRANB2O95218 330 aaKnown RBP eCLIP5.16□□□□□ -1.58
USP48-211ENST00000526044 HLA-DOAP06340 250 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 ZSCAN20P17040 1043 aaPredicted RBP5.16□□□□□ -1.58
USP48-211ENST00000526044 MAKP20794 623 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 MCM7P33993 719 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 HSPA4P34932 840 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 PTGS2P35354 604 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 PLCD1P51178 756 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 CHN2P52757 468 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 PTTG1IPP53801 180 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 CTXN1P60606 82 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 HAND2P61296 217 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 CREMQ03060 361 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 IL10RAQ13651 578 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 SUPT20HL1Q3ZLR7 823 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 FAM102AQ5T9C2 384 aaPredicted RBP5.16□□□□□ -1.58
USP48-211ENST00000526044 FNDC7Q5VTL7 733 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 ZNF529Q6P280 563 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 MFSD6Q6ZSS7 791 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 MED25Q71SY5 747 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 CMTR2Q8IYT2 770 aaKnown RBP5.16□□□□□ -1.58
USP48-211ENST00000526044 ZNF444Q8N0Y2 327 aaPredicted RBP5.16□□□□□ -1.58
USP48-211ENST00000526044 ZNF483Q8TF39 744 aaPredicted RBP5.16□□□□□ -1.58
USP48-211ENST00000526044 HAS1Q92839 578 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 PMM1Q92871 262 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 HOOK2Q96ED9 719 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 TMX3Q96JJ7 454 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 MYOCQ99972 504 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 OSBPL5Q9H0X9 879 aaPredicted RBP5.16□□□□□ -1.58
USP48-211ENST00000526044 DEFB129Q9H1M3 183 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 ZNF287Q9HBT7 754 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 NMRK2Q9NPI5 230 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 DDX4Q9NQI0 724 aaKnown RBP5.16□□□□□ -1.58
USP48-211ENST00000526044 AASDHPPTQ9NRN7 309 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 ARPP21Q9UBL0 812 aaPredicted RBP5.16□□□□□ -1.58
USP48-211ENST00000526044 GABBR1Q9UBS5 961 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 SLC23A1Q9UHI7 598 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 SERPINB13Q9UIV8 391 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 ANAPC4Q9UJX5 808 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 SCAF8Q9UPN6 1271 aaKnown RBP5.16□□□□□ -1.58
USP48-211ENST00000526044 RUVBL1Q9Y265 456 aaKnown RBP5.16□□□□□ -1.58
USP48-211ENST00000526044 CHST2Q9Y4C5 530 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 CFAP20Q9Y6A4 193 aaKnown RBP5.16□□□□□ -1.58
USP48-211ENST00000526044 WDR90Q96KV7 1748 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 ASTN2O75129 1339 aaPredicted RBP5.16□□□□□ -1.58
USP48-211ENST00000526044 FLT1P17948 1338 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 FOCADQ5VW36 1801 aa5.16□□□□□ -1.58
USP48-211ENST00000526044 CYP2D7A0A087X1C5 515 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 CCDC194A0A1B0GVG4 234 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 GAGE12BA1L429 117 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 GAGE12HA6NDE8 117 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 DDTLA6NHG4 134 aaPredicted RBP5.15□□□□□ -1.59
USP48-211ENST00000526044 RNASET2O00584 256 aaKnown RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms