RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.34□□□□□ -1.55
CD44-218ENST00000525469 SPATA6Q9NWH7 488 aaPredicted RBP5.34□□□□□ -1.55
CD44-218ENST00000525469 IFNKQ9P0W0 207 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 IGSF9Q9P2J2 1179 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 PDP2Q9P2J9 529 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 WDR35Q9P2L0 1181 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 SCOCQ9UIL1 159 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 CDH22Q9UJ99 828 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 RCOR1Q9UKL0 485 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 RNF114Q9Y508 228 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 COMMD3-BMI1R4GMX3 469 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 DENND4AQ7Z401 1863 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 DOCK5Q9H7D0 1870 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 DOCK8Q8NF50 2099 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 PATJQ8NI35 1801 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 EIF4E1BA6NMX2 242 aaKnown RBP5.33□□□□□ -1.56
CD44-218ENST00000525469 H3BQV1 296 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 M0QZ92 97 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 NOP56O00567 594 aaKnown RBP5.33□□□□□ -1.56
CD44-218ENST00000525469 LSM1O15116 133 aaKnown RBP5.33□□□□□ -1.56
CD44-218ENST00000525469 USO1O60763 962 aaKnown RBP5.33□□□□□ -1.56
CD44-218ENST00000525469 HIP1RO75146 1068 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 PRDM1O75626 825 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 KRT38O76015 456 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 ANP32DO95626 131 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 SLC3A2P08195 630 aaKnown RBP5.33□□□□□ -1.56
CD44-218ENST00000525469 ARP10275 920 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 SCG2P13521 617 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 ZNF24P17028 368 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 FUT4P22083 530 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 PMLP29590 882 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 LSP1P33241 339 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 ADD2P35612 726 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 SKIV2L2P42285 1042 aaKnown RBP5.33□□□□□ -1.56
CD44-218ENST00000525469 VSNL1P62760 191 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 PHEXP78562 749 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 RPL6Q02878 288 aaKnown RBP5.33□□□□□ -1.56
CD44-218ENST00000525469 CSTF1Q05048 431 aaKnown RBP5.33□□□□□ -1.56
CD44-218ENST00000525469 KCNC3Q14003 757 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 SEPT6Q14141 434 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 ZNF268Q14587 947 aaPredicted RBP5.33□□□□□ -1.56
CD44-218ENST00000525469 INPP5AQ14642 412 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 KPNB1Q14974 876 aaKnown RBP5.33□□□□□ -1.56
CD44-218ENST00000525469 ADRM1Q16186 407 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 GSTA3Q16772 222 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 IMMTQ16891 758 aaKnown RBP5.33□□□□□ -1.56
CD44-218ENST00000525469 SBK1Q52WX2 424 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 ANKRD20A8PQ5CZ79 823 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 SFRP5Q5T4F7 317 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 N4BP2L1Q5TBK1 243 aaPredicted RBP5.33□□□□□ -1.56
CD44-218ENST00000525469 MEI1Q5TIA1 1274 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 SYDE2Q5VT97 1194 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 ARHGEF16Q5VV41 709 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 ADALQ6DHV7 355 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 NCAPH2Q6IBW4 605 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 LRIG3Q6UXM1 1119 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 UNQ6494/PRO21346Q6UXR6 183 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 CCDC149Q6ZUS6 474 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 C22orf34Q6ZV56 151 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 CBLL1Q75N03 491 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 RASGRP2Q7LDG7 609 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 PPFIBP1Q86W92 1011 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 NT5DC4Q86YG4 428 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 ANKRD13BQ86YJ7 626 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 FAM186BQ8IYM0 893 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 MREGQ8N565 214 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 TRIML1Q8N9V2 468 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 CCDC63Q8NA47 563 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 ZBTB8BQ8NAP8 495 aaPredicted RBP5.33□□□□□ -1.56
CD44-218ENST00000525469 PPP1R14CQ8TAE6 165 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 PIP4K2CQ8TBX8 421 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 NOC3LQ8WTT2 800 aaKnown RBP5.33□□□□□ -1.56
CD44-218ENST00000525469 TEKT4Q8WW24 435 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 IFT81Q8WYA0 676 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 TBC1D5Q92609 795 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 CENPTQ96BT3 561 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 STAMBPL1Q96FJ0 436 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 DHTKD1Q96HY7 919 aaPredicted RBP5.33□□□□□ -1.56
CD44-218ENST00000525469 SHDQ96IW2 340 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 MIPEPQ99797 713 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 STMN4Q9H169 189 aaPredicted RBP5.33□□□□□ -1.56
CD44-218ENST00000525469 TNKS2Q9H2K2 1166 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 RNPEPQ9H4A4 650 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 HAUS4Q9H6D7 363 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 CCSER2Q9H7U1 834 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 MLXIPQ9HAP2 919 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 CAPN10Q9HC96 672 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 EXOC1Q9NV70 894 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 ZSCAN32Q9NX65 697 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 KLHL42Q9P2K6 505 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 ANKFY1Q9P2R3 1169 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 FBXO4Q9UKT5 387 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 STX8Q9UNK0 236 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 CEP131Q9UPN4 1083 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 LZTS1Q9Y250 596 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 ASB3Q9Y575 518 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 PCDHB7Q9Y5E2 793 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 HCFC2Q9Y5Z7 792 aa5.33□□□□□ -1.56
CD44-218ENST00000525469 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.33□□□□□ -1.56
CD44-218ENST00000525469 EVPLQ92817 2033 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms