RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 TNRC6BQ9UPQ9 1833 aaKnown RBP25.47■■□□□ 1.67
USP47-205ENST00000525257 IGF2RP11717 2491 aa25.46■■□□□ 1.67
USP47-205ENST00000525257 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.46■■□□□ 1.67
USP47-205ENST00000525257 C1QTNF9BB2RNN3 333 aa25.46■■□□□ 1.67
USP47-205ENST00000525257 MAP3K13O43283 966 aa25.46■■□□□ 1.67
USP47-205ENST00000525257 C1QTNF9P0C862 333 aa25.46■■□□□ 1.67
USP47-205ENST00000525257 GRIA2P42262 883 aa25.46■■□□□ 1.67
USP47-205ENST00000525257 MYL6P60660 151 aa25.46■■□□□ 1.67
USP47-205ENST00000525257 TRPC3Q13507 836 aa25.46■■□□□ 1.67
USP47-205ENST00000525257 EOGTQ5NDL2 527 aa25.46■■□□□ 1.67
USP47-205ENST00000525257 LY6G5CQ5SRR4 150 aa25.46■■□□□ 1.67
USP47-205ENST00000525257 LPCAT2Q7L5N7 544 aa25.46■■□□□ 1.67
USP47-205ENST00000525257 TMEFF1Q8IYR6 380 aa25.46■■□□□ 1.67
USP47-205ENST00000525257 NUP93Q8N1F7 819 aa25.46■■□□□ 1.67
USP47-205ENST00000525257 XXYLT1Q8NBI6 393 aa25.46■■□□□ 1.67
USP47-205ENST00000525257 HMGB4Q8WW32 186 aa25.46■■□□□ 1.67
USP47-205ENST00000525257 RALYQ9UKM9 306 aaKnown RBP25.46■■□□□ 1.67
USP47-205ENST00000525257 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.45■■□□□ 1.66
USP47-205ENST00000525257 COCHO43405 550 aa25.45■■□□□ 1.66
USP47-205ENST00000525257 FAM163BP0C2L3 166 aa25.45■■□□□ 1.66
USP47-205ENST00000525257 SPINK2P20155 84 aa25.45■■□□□ 1.66
USP47-205ENST00000525257 KIR2DL1P43626 348 aaPredicted RBP25.45■■□□□ 1.66
USP47-205ENST00000525257 AMPD3Q01432 767 aa25.45■■□□□ 1.66
USP47-205ENST00000525257 HSF5Q4G112 596 aaPredicted RBP25.45■■□□□ 1.66
USP47-205ENST00000525257 TRIM61Q5EBN2 209 aa25.45■■□□□ 1.66
USP47-205ENST00000525257 UNQ6494/PRO21346Q6UXR6 183 aa25.45■■□□□ 1.66
USP47-205ENST00000525257 LINC00301Q8NCQ3 95 aa25.45■■□□□ 1.66
USP47-205ENST00000525257 PDZD8Q8NEN9 1154 aa25.45■■□□□ 1.66
USP47-205ENST00000525257 ZNF516Q92618 1163 aa25.45■■□□□ 1.66
USP47-205ENST00000525257 GZF1Q9H116 711 aaPredicted RBP25.45■■□□□ 1.66
USP47-205ENST00000525257 CUEDC2Q9H467 287 aa25.45■■□□□ 1.66
USP47-205ENST00000525257 ZSCAN16Q9H4T2 348 aaPredicted RBP25.45■■□□□ 1.66
USP47-205ENST00000525257 TBC1D14Q9P2M4 693 aa25.45■■□□□ 1.66
USP47-205ENST00000525257 MBD1Q9UIS9 605 aaPredicted RBP25.45■■□□□ 1.66
USP47-205ENST00000525257 TCRBV21S2A2A0A5A6 115 aa25.44■■□□□ 1.66
USP47-205ENST00000525257 E2F8A0AVK6 867 aa25.44■■□□□ 1.66
USP47-205ENST00000525257 ADAM23O75077 832 aa25.44■■□□□ 1.66
USP47-205ENST00000525257 CLSTN1O94985 981 aa25.44■■□□□ 1.66
USP47-205ENST00000525257 RTN3O95197 1032 aaPredicted RBP25.44■■□□□ 1.66
USP47-205ENST00000525257 CSRP1P21291 193 aaKnown RBP25.44■■□□□ 1.66
USP47-205ENST00000525257 PTGER3P43115 390 aa25.44■■□□□ 1.66
USP47-205ENST00000525257 PGBD3Q8N328 593 aa25.44■■□□□ 1.66
USP47-205ENST00000525257 NAT16Q8N8M0 369 aa25.44■■□□□ 1.66
USP47-205ENST00000525257 SCFD1Q8WVM8 642 aa25.44■■□□□ 1.66
USP47-205ENST00000525257 ZFRQ96KR1 1074 aaKnown RBP25.44■■□□□ 1.66
USP47-205ENST00000525257 KCNK16Q96T55 309 aa25.44■■□□□ 1.66
USP47-205ENST00000525257 XYLT2Q9H1B5 865 aa25.44■■□□□ 1.66
USP47-205ENST00000525257 SMYD3Q9H7B4 428 aa25.44■■□□□ 1.66
USP47-205ENST00000525257 CHORDC1Q9UHD1 332 aaPredicted RBP25.44■■□□□ 1.66
USP47-205ENST00000525257 EVLQ9UI08 416 aaPredicted RBP25.44■■□□□ 1.66
USP47-205ENST00000525257 PLXND1Q9Y4D7 1925 aa25.43■■□□□ 1.66
USP47-205ENST00000525257 UBE4BO95155 1302 aa25.43■■□□□ 1.66
USP47-205ENST00000525257 ATXN2Q99700 1313 aaKnown RBP25.43■■□□□ 1.66
USP47-205ENST00000525257 A0A0A0MRY4 1105 aa25.43■■□□□ 1.66
USP47-205ENST00000525257 SPTLC2O15270 562 aa25.43■■□□□ 1.66
USP47-205ENST00000525257 STAU1O95793 577 aaKnown RBP25.43■■□□□ 1.66
USP47-205ENST00000525257 TOP3BO95985 862 aaKnown RBP25.43■■□□□ 1.66
USP47-205ENST00000525257 CEACAM1P13688 526 aa25.43■■□□□ 1.66
USP47-205ENST00000525257 TNFRSF4P43489 277 aa25.43■■□□□ 1.66
USP47-205ENST00000525257 GAD2Q05329 585 aa25.43■■□□□ 1.66
USP47-205ENST00000525257 FAM35AQ86V20 835 aa25.43■■□□□ 1.66
USP47-205ENST00000525257 PHTF2Q8N3S3 785 aa25.43■■□□□ 1.66
USP47-205ENST00000525257 DEFB124Q8NES8 71 aa25.43■■□□□ 1.66
USP47-205ENST00000525257 SCAMP5Q8TAC9 235 aa25.43■■□□□ 1.66
USP47-205ENST00000525257 OVCA2Q8WZ82 227 aa25.43■■□□□ 1.66
USP47-205ENST00000525257 MED10Q9BTT4 135 aa25.43■■□□□ 1.66
USP47-205ENST00000525257 NUSAP1Q9BXS6 441 aaKnown RBP25.43■■□□□ 1.66
USP47-205ENST00000525257 CCSER2Q9H7U1 834 aa25.43■■□□□ 1.66
USP47-205ENST00000525257 TMEM74BQ9NUR3 256 aa25.43■■□□□ 1.66
USP47-205ENST00000525257 SH3BP1Q9Y3L3 701 aa25.43■■□□□ 1.66
USP47-205ENST00000525257 AKAP13Q12802 2813 aa25.43■■□□□ 1.66
USP47-205ENST00000525257 ZZEF1O43149 2961 aa25.43■■□□□ 1.66
USP47-205ENST00000525257 ATP8B3O60423 1300 aa25.42■■□□□ 1.66
USP47-205ENST00000525257 TNFRSF10BO14763 440 aa25.42■■□□□ 1.66
USP47-205ENST00000525257 STX6O43752 255 aa25.42■■□□□ 1.66
USP47-205ENST00000525257 PHACTR2O75167 634 aa25.42■■□□□ 1.66
USP47-205ENST00000525257 CASP1P29466 404 aa25.42■■□□□ 1.66
USP47-205ENST00000525257 ATICP31939 592 aa25.42■■□□□ 1.66
USP47-205ENST00000525257 MAPK8P45983 427 aa25.42■■□□□ 1.66
USP47-205ENST00000525257 CASP4P49662 377 aa25.42■■□□□ 1.66
USP47-205ENST00000525257 CDH8P55286 799 aa25.42■■□□□ 1.66
USP47-205ENST00000525257 LMAN2Q12907 356 aa25.42■■□□□ 1.66
USP47-205ENST00000525257 MAP7D1Q3KQU3 841 aa25.42■■□□□ 1.66
USP47-205ENST00000525257 HECTD3Q5T447 861 aa25.42■■□□□ 1.66
USP47-205ENST00000525257 SYAP1Q96A49 352 aaPredicted RBP25.42■■□□□ 1.66
USP47-205ENST00000525257 TFIP11Q9UBB9 837 aaKnown RBP25.42■■□□□ 1.66
USP47-205ENST00000525257 WASF3Q9UPY6 502 aa25.42■■□□□ 1.66
USP47-205ENST00000525257 ASCC3Q8N3C0 2202 aaKnown RBP25.42■■□□□ 1.66
USP47-205ENST00000525257 MYO18AQ92614 2054 aaKnown RBP25.41■■□□□ 1.66
USP47-205ENST00000525257 TBC1D3BA6NDS4 549 aa25.41■■□□□ 1.66
USP47-205ENST00000525257 IRF1P10914 325 aa25.41■■□□□ 1.66
USP47-205ENST00000525257 SLC5A3P53794 718 aa25.41■■□□□ 1.66
USP47-205ENST00000525257 BTBD8Q5XKL5 378 aa25.41■■□□□ 1.66
USP47-205ENST00000525257 CNNM4Q6P4Q7 775 aa25.41■■□□□ 1.66
USP47-205ENST00000525257 SCARA5Q6ZMJ2 495 aa25.41■■□□□ 1.66
USP47-205ENST00000525257 SYT12Q8IV01 421 aa25.41■■□□□ 1.66
USP47-205ENST00000525257 BBS7Q8IWZ6 715 aa25.41■■□□□ 1.66
USP47-205ENST00000525257 IQUBQ8NA54 791 aa25.41■■□□□ 1.66
USP47-205ENST00000525257 ELMO3Q96BJ8 720 aa25.41■■□□□ 1.66
USP47-205ENST00000525257 OTUB2Q96DC9 234 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms