RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 CCR3P51677 355 aa12.94□□□□□ -0.34
CHKA-203ENST00000525155 GCNT1Q02742 428 aa12.94□□□□□ -0.34
CHKA-203ENST00000525155 PUM1Q14671 1186 aaKnown RBP eCLIP12.94□□□□□ -0.34
CHKA-203ENST00000525155 HSP90AA4PQ58FG1 418 aa12.94□□□□□ -0.34
CHKA-203ENST00000525155 INTS6LQ5JSJ4 861 aaKnown RBP12.94□□□□□ -0.34
CHKA-203ENST00000525155 MIIPQ5JXC2 388 aa12.94□□□□□ -0.34
CHKA-203ENST00000525155 FSTL4Q6MZW2 842 aa12.94□□□□□ -0.34
CHKA-203ENST00000525155 C4orf50Q6ZRC1 276 aa12.94□□□□□ -0.34
CHKA-203ENST00000525155 DGLUCYQ7Z3D6 616 aa12.94□□□□□ -0.34
CHKA-203ENST00000525155 MON1AQ86VX9 555 aa12.94□□□□□ -0.34
CHKA-203ENST00000525155 CELF5Q8N6W0 485 aaKnown RBP12.94□□□□□ -0.34
CHKA-203ENST00000525155 MYRFLQ96LU7 910 aa12.94□□□□□ -0.34
CHKA-203ENST00000525155 INTS2Q9H0H0 1204 aaKnown RBP12.94□□□□□ -0.34
CHKA-203ENST00000525155 EBF3Q9H4W6 596 aa12.94□□□□□ -0.34
CHKA-203ENST00000525155 NCDNQ9UBB6 729 aa12.94□□□□□ -0.34
CHKA-203ENST00000525155 PATJQ8NI35 1801 aa12.94□□□□□ -0.34
CHKA-203ENST00000525155 MIA3Q5JRA6 1907 aa12.94□□□□□ -0.34
CHKA-203ENST00000525155 SDK1Q7Z5N4 2213 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 DPYSL4O14531 572 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 NOL4O94818 638 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 FGF19O95750 216 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 COPB1P53618 953 aaKnown RBP12.93□□□□□ -0.34
CHKA-203ENST00000525155 MFAP3P55082 362 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 INCA1Q0VD86 236 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 CUL2Q13617 745 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 RUNX3Q13761 415 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 VEPH1Q14D04 833 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 ARHGAP15Q53QZ3 475 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 TMEM196Q5HYL7 178 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 HEATR6Q6AI08 1181 aaKnown RBP12.93□□□□□ -0.34
CHKA-203ENST00000525155 SPOPLQ6IQ16 392 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 SCARA5Q6ZMJ2 495 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 LMO3Q8TAP4 145 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 MSANTD3Q96H12 275 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 FUBP3Q96I24 572 aaKnown RBP eCLIP12.93□□□□□ -0.34
CHKA-203ENST00000525155 IER2Q9BTL4 223 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 VPS16Q9H269 839 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 LINC00597Q9H2U6 94 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 SMYD3Q9H7B4 428 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 APOBEC3GQ9HC16 384 aaKnown RBP12.93□□□□□ -0.34
CHKA-203ENST00000525155 ABCB6Q9NP58 842 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 CRTAC1Q9NQ79 661 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 TMEM30AQ9NV96 361 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 TAB2Q9NYJ8 693 aa12.93□□□□□ -0.34
CHKA-203ENST00000525155 MAGED2Q9UNF1 606 aaPredicted RBP12.93□□□□□ -0.34
CHKA-203ENST00000525155 ATP8B3O60423 1300 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 LGALS16A8MUM7 142 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 TRDMT1O14717 391 aaKnown RBP12.92□□□□□ -0.34
CHKA-203ENST00000525155 SERPINC1P01008 464 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 TPM3P06753 285 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 HOXA6P31267 233 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 PXNP49023 591 aaPredicted RBP12.92□□□□□ -0.34
CHKA-203ENST00000525155 GALK1P51570 392 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 NRLP54845 237 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 USP46P62068 366 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 SPEM2Q0P670 501 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 ITPRIPL2Q3MIP1 535 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 DGKKQ5KSL6 1271 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 TRIM65Q6PJ69 517 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 LUZP1Q86V48 1076 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 PPM1KQ8N3J5 372 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 SYT15Q9BQS2 421 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 MRPL45Q9BRJ2 306 aaKnown RBP12.92□□□□□ -0.34
CHKA-203ENST00000525155 NT5C1AQ9BXI3 368 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 HSD3B7Q9H2F3 369 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 CISHQ9NSE2 258 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 TDP1Q9NUW8 608 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 APEX2Q9UBZ4 518 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 KIAA1257Q9ULG3 409 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 TSC2P49815 1807 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 TPRP12270 2363 aaKnown RBP12.92□□□□□ -0.34
CHKA-203ENST00000525155 TICRRQ7Z2Z1 1910 aa12.92□□□□□ -0.34
CHKA-203ENST00000525155 DCDC2BA2VCK2 349 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 C2orf78A6NCI8 922 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 CILPO75339 1184 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 EGFP01133 1207 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 PDGFRBP09619 1106 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 CSH1P0DML2 217 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 CSH2P0DML3 217 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 PTPN1P18031 435 aaKnown RBP12.91□□□□□ -0.34
CHKA-203ENST00000525155 PON1P27169 355 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 CACNA2D1P54289 1103 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 CDH8P55286 799 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 PSMC1P62191 440 aaKnown RBP12.91□□□□□ -0.34
CHKA-203ENST00000525155 PLCB2Q00722 1185 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 UBXN1Q04323 297 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 LRMPQ12912 555 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 GAB4Q2WGN9 574 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 CFAP221Q4G0U5 840 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 LONP2Q86WA8 852 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 SPATA2LQ8IUW3 424 aaPredicted RBP12.91□□□□□ -0.34
CHKA-203ENST00000525155 CRYBG2Q8N1P7 616 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 B3GALNT2Q8NCR0 500 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 MYCBPAPQ8TBZ2 947 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 TATDN2Q93075 761 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 TRMT2BQ96GJ1 504 aaKnown RBP12.91□□□□□ -0.34
CHKA-203ENST00000525155 CEP295NLQ96MC4 621 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 CRACR2AQ9BSW2 395 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 PLCB1Q9NQ66 1216 aa12.91□□□□□ -0.34
CHKA-203ENST00000525155 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.91□□□□□ -0.348e-7■■■■■ 54.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms