RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 C3orf36Q3SXR2 165 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 EPHA10Q5JZY3 1008 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 SYDE2Q5VT97 1194 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 EGFLAMQ63HQ2 1017 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 COPS6Q7L5N1 327 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 DDX42Q86XP3 938 aaKnown RBP eCLIP3.67□□□□□ -1.82
CSDE1-208ENST00000524652 SLC17A8Q8NDX2 589 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 POC1BQ8TC44 478 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 NSUN6Q8TEA1 469 aaKnown RBP3.67□□□□□ -1.82
CSDE1-208ENST00000524652 SCARB1Q8WTV0 552 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 SCAMP4Q969E2 229 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 COA7Q96BR5 231 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 LRIG1Q96JA1 1093 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 CLPTM1LQ96KA5 538 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 TRIB1Q96RU8 372 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 DMRTA2Q96SC8 542 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 OSBPL9Q96SU4 736 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 DDX21Q9NR30 783 aaKnown RBP eCLIP3.67□□□□□ -1.82
CSDE1-208ENST00000524652 GNL3LQ9NVN8 582 aaKnown RBP3.67□□□□□ -1.82
CSDE1-208ENST00000524652 RNF7Q9UBF6 113 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 SLC45A2Q9UMX9 530 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 ATP8A1Q9Y2Q0 1164 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 PCDHB1Q9Y5F3 818 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 MRFAP1Q9Y605 127 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 CFAP20Q9Y6A4 193 aaKnown RBP3.67□□□□□ -1.82
CSDE1-208ENST00000524652 ZNF646O15015 1829 aaPredicted RBP3.67□□□□□ -1.82
CSDE1-208ENST00000524652 SLX4Q8IY92 1834 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 UBN2Q6ZU65 1347 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 LRRC37AA6NMS7 1700 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 SBF1O95248 1867 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 PXDNLA1KZ92 1463 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 CARMIL3Q8ND23 1372 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 A0A0B4J269 797 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 MANSC4A6NHS7 340 aaPredicted RBP3.66□□□□□ -1.82
CSDE1-208ENST00000524652 CCDC154A6NI56 674 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 LINC01548A6NM66 108 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 VWC2LB2RUY7 222 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 E9PLN8 166 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 XPOTO43592 962 aaKnown RBP3.66□□□□□ -1.82
CSDE1-208ENST00000524652 TRIAP1O43715 76 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 PLIN1O60240 522 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 SOAT2O75908 522 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 STARD3NLO95772 234 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 CHEK2O96017 543 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 ERBB2P04626 1255 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 CELA2AP08217 269 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 GNAI3P08754 354 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 CYP2C19P33261 490 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 DDR1Q08345 913 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 TUBB3Q13509 450 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 IL10RAQ13651 578 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 ALDH1L2Q3SY69 923 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 FAM153CQ494X1 144 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 CCDC93Q567U6 631 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 C20orf194Q5TEA3 1177 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 CCDC30Q5VVM6 783 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 TBC1D9BQ66K14 1250 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 AMIGO2Q86SJ2 522 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 TTC7BQ86TV6 843 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 NSUN7Q8NE18 718 aaKnown RBP3.66□□□□□ -1.82
CSDE1-208ENST00000524652 DPF1Q92782 380 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 TEKT5Q96M29 485 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 HAPLN3Q96S86 360 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 VKORC1Q9BQB6 163 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 TEX13AQ9BXU3 409 aaPredicted RBP3.66□□□□□ -1.82
CSDE1-208ENST00000524652 SLC29A3Q9BZD2 475 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 STK32BQ9NY57 414 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 TFCP2L1Q9NZI6 479 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 FLRT1Q9NZU1 646 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 DBF4Q9UBU7 674 aaPredicted RBP3.66□□□□□ -1.82
CSDE1-208ENST00000524652 ZNF70Q9UC06 446 aaPredicted RBP3.66□□□□□ -1.82
CSDE1-208ENST00000524652 NARFQ9UHQ1 456 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 ATP10DQ9P241 1426 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 LTBP1Q14766 1721 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 FER1L6Q2WGJ9 1857 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 MYO5AQ9Y4I1 1855 aaKnown RBP3.66□□□□□ -1.82
CSDE1-208ENST00000524652 AOX1Q06278 1338 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 MAP3K15Q6ZN16 1313 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 ADGRA2Q96PE1 1338 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 CHD4Q14839 1912 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 MYH13Q9UKX3 1938 aa3.66□□□□□ -1.82
CSDE1-208ENST00000524652 DICER1Q9UPY3 1922 aaKnown RBP3.66□□□□□ -1.82
CSDE1-208ENST00000524652 ABCC12Q96J65 1359 aa3.65□□□□□ -1.82
CSDE1-208ENST00000524652 PDE4DIPQ5VU43 2346 aa3.65□□□□□ -1.82
CSDE1-208ENST00000524652 SHTN1A0MZ66 631 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 PI4KAP2A4QPH2 592 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 FZD9O00144 591 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 F2RL2O00254 374 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 POLRMTO00411 1230 aaKnown RBP3.65□□□□□ -1.83
CSDE1-208ENST00000524652 PCDHGA12O60330 932 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 TTLL1O95922 423 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 IGKV5-2P06315 115 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 CT47B1P0C2W7 299 aaPredicted RBP3.65□□□□□ -1.83
CSDE1-208ENST00000524652 FTH1P19P0C7X4 201 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 MYBL2P10244 700 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 TRIM27P14373 513 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 LPOP22079 712 aaPredicted RBP3.65□□□□□ -1.83
CSDE1-208ENST00000524652 TM4SF1P30408 202 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 RGS19P49795 217 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 NDUFV1P49821 464 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms