RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 TMEM31Q5JXX7 168 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 PM20D1Q6GTS8 502 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 FAM71AQ8IYT1 594 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 ZNF687Q8N1G0 1237 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 UBA3Q8TBC4 463 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 FBXO32Q969P5 355 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 FAM81BQ96LP2 452 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 GCNAQ96QF7 691 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 FAM83CQ9BQN1 747 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 DDX23Q9BUQ8 820 aaKnown RBP12.62□□□□□ -0.39
CLN8-207ENST00000524258 TDP1Q9NUW8 608 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 EHD2Q9NZN4 543 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 ARHGAP26Q9UNA1 814 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 FHOD1Q9Y613 1164 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 COL4A2P08572 1712 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 COL4A3Q01955 1670 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 CHADO15335 359 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 CYP26A1O43174 497 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 PNMA6AP0CW24 399 aaPredicted RBP12.61□□□□□ -0.39
CLN8-207ENST00000524258 UCHL3P15374 230 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 HDCP19113 662 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 GPD2P43304 727 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 PLA2G4AP47712 749 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 TUBP50607 506 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 BCAT1P54687 386 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 BST2Q10589 180 aaKnown RBP12.61□□□□□ -0.39
CLN8-207ENST00000524258 MEA1Q16626 185 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 ARHGAP44Q17R89 818 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 CWF19L1Q69YN2 538 aaKnown RBP12.61□□□□□ -0.39
CLN8-207ENST00000524258 PMF1Q6P1K2 205 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 CCDC186Q7Z3E2 898 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 SCML4Q8N228 414 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 ZNF276Q8N554 614 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 WDTC1Q8N5D0 677 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 CELF5Q8N6W0 485 aaKnown RBP12.61□□□□□ -0.39
CLN8-207ENST00000524258 PDZD8Q8NEN9 1154 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 ZNF606Q8WXB4 792 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 KCTD13Q8WZ19 329 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 WBP2Q969T9 261 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 SLITRK1Q96PX8 696 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 ERGIC2Q96RQ1 377 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 TRMT61BQ9BVS5 477 aaKnown RBP12.61□□□□□ -0.39
CLN8-207ENST00000524258 FBXO44Q9H4M3 255 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 CCSER2Q9H7U1 834 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 CBX8Q9HC52 389 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 CYLDQ9NQC7 956 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 CYTH4Q9UIA0 394 aa12.61□□□□□ -0.39
CLN8-207ENST00000524258 NUP210Q8TEM1 1887 aaPredicted RBP12.61□□□□□ -0.39
CLN8-207ENST00000524258 KIF26AQ9ULI4 1882 aaPredicted RBP12.61□□□□□ -0.39
CLN8-207ENST00000524258 TRAV19A0A0A6YYK7 116 aa12.6□□□□□ -0.39
CLN8-207ENST00000524258 TEX33O43247 280 aa12.6□□□□□ -0.39
CLN8-207ENST00000524258 COCHO43405 550 aa12.6□□□□□ -0.39
CLN8-207ENST00000524258 GREM1O60565 184 aa12.6□□□□□ -0.39
CLN8-207ENST00000524258 TBX18O95935 607 aa12.6□□□□□ -0.39
CLN8-207ENST00000524258 USP17L7P0C7H9 530 aa12.6□□□□□ -0.39
CLN8-207ENST00000524258 SETSIPP0DME0 302 aa12.6□□□□□ -0.39
CLN8-207ENST00000524258 TRIM21P19474 475 aaKnown RBP12.6□□□□□ -0.39
CLN8-207ENST00000524258 GDI1P31150 447 aa12.6□□□□□ -0.39
CLN8-207ENST00000524258 AVPR1AP37288 418 aa12.6□□□□□ -0.39
CLN8-207ENST00000524258 STARD6P59095 220 aa12.6□□□□□ -0.39
CLN8-207ENST00000524258 IFRD2Q12894 506 aaPredicted RBP12.6□□□□□ -0.39
CLN8-207ENST00000524258 DRAP1Q14919 205 aaPredicted RBP12.6□□□□□ -0.39
CLN8-207ENST00000524258 STILQ15468 1287 aa12.6□□□□□ -0.39
CLN8-207ENST00000524258 SLC44A4Q53GD3 710 aa12.6□□□□□ -0.39
CLN8-207ENST00000524258 DENND1BQ6P3S1 775 aa12.6□□□□□ -0.39
CLN8-207ENST00000524258 BPIFB1Q8TDL5 484 aa12.6□□□□□ -0.39
CLN8-207ENST00000524258 NDRG1Q92597 394 aaKnown RBP12.6□□□□□ -0.39
CLN8-207ENST00000524258 DNASE1L2Q92874 299 aa12.6□□□□□ -0.39
CLN8-207ENST00000524258 CHFRQ96EP1 664 aa12.6□□□□□ -0.39
CLN8-207ENST00000524258 ZFYVE19Q96K21 471 aa12.6□□□□□ -0.39
CLN8-207ENST00000524258 LSM14BQ9BX40 385 aaKnown RBP12.6□□□□□ -0.39
CLN8-207ENST00000524258 DNAI2Q9GZS0 605 aa12.6□□□□□ -0.39
CLN8-207ENST00000524258 NAT10Q9H0A0 1025 aaKnown RBP12.6□□□□□ -0.39
CLN8-207ENST00000524258 KIF9Q9HAQ2 790 aa12.6□□□□□ -0.39
CLN8-207ENST00000524258 TRPC7Q9HCX4 862 aa12.6□□□□□ -0.39
CLN8-207ENST00000524258 RTN4Q9NQC3 1192 aaKnown RBP12.6□□□□□ -0.39
CLN8-207ENST00000524258 HPS4Q9NQG7 708 aa12.6□□□□□ -0.39
CLN8-207ENST00000524258 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLN8-207ENST00000524258 CACNA1HO95180 2353 aa12.59□□□□□ -0.39
CLN8-207ENST00000524258 MUC6Q6W4X9 2439 aa12.59□□□□□ -0.39
CLN8-207ENST00000524258 A0A1W2PQH9 124 aa12.59□□□□□ -0.39
CLN8-207ENST00000524258 OTOL1A6NHN0 477 aaPredicted RBP12.59□□□□□ -0.39
CLN8-207ENST00000524258 KRT5P13647 590 aa12.59□□□□□ -0.39
CLN8-207ENST00000524258 TKTL1P51854 596 aa12.59□□□□□ -0.39
CLN8-207ENST00000524258 JAM2P57087 298 aa12.59□□□□□ -0.39
CLN8-207ENST00000524258 FZD5Q13467 585 aa12.59□□□□□ -0.39
CLN8-207ENST00000524258 SYCP1Q15431 976 aa12.59□□□□□ -0.39
CLN8-207ENST00000524258 HECTD3Q5T447 861 aa12.59□□□□□ -0.39
CLN8-207ENST00000524258 LUZP1Q86V48 1076 aa12.59□□□□□ -0.39
CLN8-207ENST00000524258 SIX5Q8N196 739 aa12.59□□□□□ -0.39
CLN8-207ENST00000524258 FBXL6Q8N531 539 aa12.59□□□□□ -0.39
CLN8-207ENST00000524258 KIAA1958Q8N8K9 716 aa12.59□□□□□ -0.39
CLN8-207ENST00000524258 SH3RF2Q8TEC5 729 aa12.59□□□□□ -0.39
CLN8-207ENST00000524258 DDX1Q92499 740 aaKnown RBP12.59□□□□□ -0.39
CLN8-207ENST00000524258 SECISBP2LQ93073 1101 aaKnown RBP12.59□□□□□ -0.39
CLN8-207ENST00000524258 PBXIP1Q96AQ6 731 aa12.59□□□□□ -0.39
CLN8-207ENST00000524258 NAP1L5Q96NT1 182 aaPredicted RBP12.59□□□□□ -0.39
CLN8-207ENST00000524258 SLC4A5Q9BY07 1137 aa12.59□□□□□ -0.39
CLN8-207ENST00000524258 STK33Q9BYT3 514 aa12.59□□□□□ -0.39
CLN8-207ENST00000524258 ULBP1Q9BZM6 244 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms