RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 HEBP1Q9NRV9 189 aa11.1□□□□□ -0.63
DENND3-220ENST00000523066 OSER1Q9NX31 292 aa11.1□□□□□ -0.63
DENND3-220ENST00000523066 IL37Q9NZH6 218 aa11.1□□□□□ -0.63
DENND3-220ENST00000523066 TRPM5Q9NZQ8 1165 aa11.1□□□□□ -0.63
DENND3-220ENST00000523066 WNT16Q9UBV4 365 aa11.1□□□□□ -0.63
DENND3-220ENST00000523066 MYOFQ9NZM1 2061 aa11.1□□□□□ -0.63
DENND3-220ENST00000523066 TRIOO75962 3097 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 TRAV19A0A0A6YYK7 116 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 SHISA7A6NL88 538 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 ARNTLO00327 626 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 O00370 1275 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 PIK3R2O00459 728 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 CYP26A1O43174 497 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 RTN3O95197 1032 aaPredicted RBP11.09□□□□□ -0.63
DENND3-220ENST00000523066 CKMP06732 381 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 VDRP11473 427 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 KRT5P13647 590 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 HDCP19113 662 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 TRIM21P19474 475 aaKnown RBP11.09□□□□□ -0.63
DENND3-220ENST00000523066 EEF1GP26641 437 aaKnown RBP11.09□□□□□ -0.63
DENND3-220ENST00000523066 SOX9P48436 509 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 ZNF132P52740 706 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 MYL5Q02045 173 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 TNK2Q07912 1038 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 PDE4CQ08493 712 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 SLC44A4Q53GD3 710 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 TRIM68Q6AZZ1 485 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 BMP8AQ7Z5Y6 402 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 PIGZQ86VD9 579 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 DHX40Q8IX18 779 aaKnown RBP11.09□□□□□ -0.63
DENND3-220ENST00000523066 FBXL6Q8N531 539 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 TTC39CQ8N584 583 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 ANKRD52Q8NB46 1076 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 BPIFB1Q8TDL5 484 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 DEPDC1BQ8WUY9 529 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 SLITRK1Q96PX8 696 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 FOXQ1Q9C009 403 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 MFSD1Q9H3U5 465 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 CCSER2Q9H7U1 834 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 NMUR1Q9HB89 426 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 ARHGEF3Q9NR81 526 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 TDP1Q9NUW8 608 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 SMPD4Q9NXE4 827 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 APEX2Q9UBZ4 518 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 DNAJC12Q9UKB3 198 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 NUDT5Q9UKK9 219 aa11.09□□□□□ -0.63
DENND3-220ENST00000523066 FAM92AA1XBS5 289 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 GTPBP10A4D1E9 387 aaKnown RBP11.08□□□□□ -0.64
DENND3-220ENST00000523066 ZNF263O14978 683 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 MDM4O15151 490 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 COCHO43405 550 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 OAS1P00973 400 aaKnown RBP11.08□□□□□ -0.64
DENND3-220ENST00000523066 PAEPP09466 180 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 USP17L7P0C7H9 530 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 ZDHHC11BP0C7U3 371 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 ATP1A3P13637 1013 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 DDX6P26196 483 aaKnown RBP eCLIP11.08□□□□□ -0.64
DENND3-220ENST00000523066 WEE1P30291 646 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 USP8P40818 1118 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 RGS7P49802 495 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 KIF11P52732 1056 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 COPB1P53618 953 aaKnown RBP11.08□□□□□ -0.64
DENND3-220ENST00000523066 FCHO2Q0JRZ9 810 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 MLF2Q15773 248 aaPredicted RBP11.08□□□□□ -0.64
DENND3-220ENST00000523066 ZNF77Q15935 545 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 PKDCCQ504Y2 493 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 TPRG1Q6ZUI0 275 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 APTXQ7Z2E3 356 aaKnown RBP11.08□□□□□ -0.64
DENND3-220ENST00000523066 SCD5Q86SK9 330 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 YAF2Q8IY57 180 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 CELF5Q8N6W0 485 aaKnown RBP11.08□□□□□ -0.64
DENND3-220ENST00000523066 TMEM105Q8N8V8 129 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 SH3RF2Q8TEC5 729 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 WBP2Q969T9 261 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 LSM14BQ9BX40 385 aaKnown RBP11.08□□□□□ -0.64
DENND3-220ENST00000523066 FAM124BQ9H5Z6 455 aaPredicted RBP11.08□□□□□ -0.64
DENND3-220ENST00000523066 TBC1D17Q9HA65 648 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 GKN1Q9NS71 199 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 GTSE1Q9NYZ3 720 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.08□□□□□ -0.64
DENND3-220ENST00000523066 CNTN6Q9UQ52 1028 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 MTF2Q9Y483 593 aaPredicted RBP11.08□□□□□ -0.64
DENND3-220ENST00000523066 FHOD1Q9Y613 1164 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 CPQQ9Y646 472 aa11.08□□□□□ -0.64
DENND3-220ENST00000523066 A0A1W2PQH9 124 aa11.07□□□□□ -0.64
DENND3-220ENST00000523066 FAM170AA1A519 330 aa11.07□□□□□ -0.64
DENND3-220ENST00000523066 OTOL1A6NHN0 477 aaPredicted RBP11.07□□□□□ -0.64
DENND3-220ENST00000523066 M0QYV0 167 aa11.07□□□□□ -0.64
DENND3-220ENST00000523066 EPHB6O15197 1021 aa11.07□□□□□ -0.64
DENND3-220ENST00000523066 CHADO15335 359 aa11.07□□□□□ -0.64
DENND3-220ENST00000523066 LETM1O95202 739 aaPredicted RBP11.07□□□□□ -0.64
DENND3-220ENST00000523066 OLFM2O95897 454 aa11.07□□□□□ -0.64
DENND3-220ENST00000523066 TBX18O95935 607 aa11.07□□□□□ -0.64
DENND3-220ENST00000523066 MBL2P11226 248 aaPredicted RBP11.07□□□□□ -0.64
DENND3-220ENST00000523066 ARSAP15289 507 aa11.07□□□□□ -0.64
DENND3-220ENST00000523066 ZNF18P17022 549 aa11.07□□□□□ -0.64
DENND3-220ENST00000523066 COL9A1P20849 921 aa11.07□□□□□ -0.64
DENND3-220ENST00000523066 BCAT1P54687 386 aa11.07□□□□□ -0.64
DENND3-220ENST00000523066 MFAP3P55082 362 aa11.07□□□□□ -0.64
DENND3-220ENST00000523066 USP4Q13107 963 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms