RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 EPHB3P54753 998 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 SKOR1P84550 965 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 CYP4A11Q02928 519 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 GRIN1Q05586 938 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 SUZ12Q15022 739 aaKnown RBP7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 SKIDA1Q1XH10 827 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 ARL13BQ3SXY8 428 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 ARHGAP15Q53QZ3 475 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 EARS2Q5JPH6 523 aaKnown RBP7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 GLRA4Q5JXX5 417 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 EOGTQ5NDL2 527 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 LCE2CQ5TA81 110 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 RESP18Q5W5W9 173 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 WWC2Q6AWC2 1192 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 IL27RAQ6UWB1 636 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 B3GNT9Q6UX72 402 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 CACTIN-AS1Q8N1I8 211 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 DCBLD1Q8N8Z6 715 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 SPC24Q8NBT2 197 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 OSCP1Q8WVF1 389 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 PSPC1Q8WXF1 523 aaKnown RBP7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 EXTL1Q92935 676 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 EXOC4Q96A65 974 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 TIGD1Q96MW7 591 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 DPH1Q9BZG8 443 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 ASCL3Q9NQ33 180 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 GPRC5CQ9NQ84 441 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 TDP1Q9NUW8 608 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 ANO10Q9NW15 660 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 DUS2Q9NX74 493 aaKnown RBP7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 GMPR2Q9P2T1 348 aaKnown RBP7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 FTSJ1Q9UET6 329 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 FBXO2Q9UK22 296 aaPredicted RBP7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 PCDHB6Q9Y5E3 794 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 PCDHB1Q9Y5F3 818 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 SNX11Q9Y5W9 270 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 MED13LQ71F56 2210 aa7.88□□□□□ -1.15
CTNNA1-227ENST00000521387 CSMD2Q7Z408 3487 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 A0A0A0MRY4 1105 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 H7C4K7 107 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 INO80B-WBP1J3KQ70 363 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 MSH4O15457 936 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 TRAPPC3O43617 180 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 DXOO77932 396 aaKnown RBP7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 C1SP09871 688 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 ATP2B1P20020 1258 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 GLDCP23378 1020 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 KRT2P35908 639 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 DCTP40126 519 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 SYKP43405 635 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 NLRP12P59046 1061 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 MTF1Q14872 753 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 PCBP1Q15365 356 aaKnown RBP eCLIP7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 NPY5RQ15761 445 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 ZNF77Q15935 545 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 HSF5Q4G112 596 aaPredicted RBP7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 PRR16Q569H4 304 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 KCNT1Q5JUK3 1230 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 WDR45BQ5MNZ6 344 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 SYCP2LQ5T4T6 812 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 CENPPQ6IPU0 288 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 XKR5Q6UX68 686 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 HEATR3Q7Z4Q2 680 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 EFCAB13Q8IY85 973 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 MAB21L3Q8N8X9 362 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 KRI1Q8N9T8 703 aaKnown RBP7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 ATAD1Q8NBU5 361 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 CTCFLQ8NI51 663 aaPredicted RBP7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 RFFLQ8WZ73 363 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 TNFRSF25Q93038 417 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 SLC6A17Q9H1V8 727 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 TTC12Q9H892 705 aaPredicted RBP7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 ASB3Q9Y575 518 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 PCDHB3Q9Y5E6 796 aa7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 ARID1BQ8NFD5 2236 aaPredicted RBP7.87□□□□□ -1.15
CTNNA1-227ENST00000521387 APCP25054 2843 aa7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 SVILO95425 2214 aa7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 TMEM131Q92545 1883 aa7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 H0Y8X5 98 aa7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 BIN1O00499 593 aa7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 WNT7AO00755 349 aa7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 BCAT2O15382 392 aaPredicted RBP7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 F11P03951 625 aa7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 MPOP05164 745 aa7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 CPB1P15086 417 aa7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 NMT1P30419 496 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 CSNK1EP49674 416 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 INSM1Q01101 510 aaPredicted RBP7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 IL9RQ01113 521 aa7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 PLD1Q13393 1074 aa7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 RILPL1Q5EBL4 403 aa7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 TXNDC8Q6A555 127 aa7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 CC2D1AQ6P1N0 951 aaPredicted RBP7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 C12orf40Q86WS4 652 aa7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 MIB1Q86YT6 1006 aa7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 AOPEPQ8N6M6 819 aa7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 ASAP3Q8TDY4 903 aa7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 FOXJ1Q92949 421 aa7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 ERLEC1Q96DZ1 483 aa7.86□□□□□ -1.15
CTNNA1-227ENST00000521387 VCPIP1Q96JH7 1222 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms