RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 GJA4P35212 333 aa18.06■□□□□ 0.48
SQLE-205ENST00000521232 PPP1R2P41236 205 aa18.06■□□□□ 0.48
SQLE-205ENST00000521232 GALK1P51570 392 aa18.06■□□□□ 0.48
SQLE-205ENST00000521232 NRLP54845 237 aa18.06■□□□□ 0.48
SQLE-205ENST00000521232 MAP3K7CLP57077 242 aa18.06■□□□□ 0.48
SQLE-205ENST00000521232 GRSF1Q12849 480 aaKnown RBP eCLIP18.06■□□□□ 0.48
SQLE-205ENST00000521232 STIM1Q13586 685 aa18.06■□□□□ 0.48
SQLE-205ENST00000521232 ISM2Q6H9L7 571 aa18.06■□□□□ 0.48
SQLE-205ENST00000521232 Q6ZS52 159 aa18.06■□□□□ 0.48
SQLE-205ENST00000521232 CPA6Q8N4T0 437 aa18.06■□□□□ 0.48
SQLE-205ENST00000521232 TTC39CQ8N584 583 aa18.06■□□□□ 0.48
SQLE-205ENST00000521232 TTC16Q8NEE8 873 aa18.06■□□□□ 0.48
SQLE-205ENST00000521232 FAM124BQ9H5Z6 455 aaPredicted RBP18.06■□□□□ 0.48
SQLE-205ENST00000521232 FAM49BQ9NUQ9 324 aa18.06■□□□□ 0.48
SQLE-205ENST00000521232 FAM200BP0CF97 657 aa18.05■□□□□ 0.48
SQLE-205ENST00000521232 CD44P16070 742 aaKnown RBP18.05■□□□□ 0.48
SQLE-205ENST00000521232 CD58P19256 250 aa18.05■□□□□ 0.48
SQLE-205ENST00000521232 BMP6P22004 513 aa18.05■□□□□ 0.48
SQLE-205ENST00000521232 SATB1Q01826 763 aa18.05■□□□□ 0.48
SQLE-205ENST00000521232 NR1H3Q13133 447 aa18.05■□□□□ 0.48
SQLE-205ENST00000521232 CBWD6Q4V339 395 aa18.05■□□□□ 0.48
SQLE-205ENST00000521232 CBWD3Q5JTY5 395 aa18.05■□□□□ 0.48
SQLE-205ENST00000521232 CBWD5Q5RIA9 395 aa18.05■□□□□ 0.48
SQLE-205ENST00000521232 HECTD3Q5T447 861 aa18.05■□□□□ 0.48
SQLE-205ENST00000521232 FSTL4Q6MZW2 842 aa18.05■□□□□ 0.48
SQLE-205ENST00000521232 FILIP1Q7Z7B0 1213 aa18.05■□□□□ 0.48
SQLE-205ENST00000521232 SUMF1Q8NBK3 374 aa18.05■□□□□ 0.48
SQLE-205ENST00000521232 DNAI2Q9GZS0 605 aa18.05■□□□□ 0.48
SQLE-205ENST00000521232 FBXO44Q9H4M3 255 aa18.05■□□□□ 0.48
SQLE-205ENST00000521232 FBRSL1Q9HCM7 1045 aaKnown RBP18.05■□□□□ 0.48
SQLE-205ENST00000521232 ARMCX3Q9UH62 379 aaPredicted RBP18.05■□□□□ 0.48
SQLE-205ENST00000521232 CPQQ9Y646 472 aa18.05■□□□□ 0.48
SQLE-205ENST00000521232 PPP1R3GB7ZBB8 358 aa18.04■□□□□ 0.48
SQLE-205ENST00000521232 HHLA1C9JL84 531 aa18.04■□□□□ 0.48
SQLE-205ENST00000521232 DRD1P21728 446 aa18.04■□□□□ 0.48
SQLE-205ENST00000521232 ADORA2BP29275 332 aa18.04■□□□□ 0.48
SQLE-205ENST00000521232 TUBP50607 506 aa18.04■□□□□ 0.48
SQLE-205ENST00000521232 MORC3Q14149 939 aa18.04■□□□□ 0.48
SQLE-205ENST00000521232 DCAF17Q5H9S7 520 aaPredicted RBP18.04■□□□□ 0.48
SQLE-205ENST00000521232 TCERG1LQ5VWI1 586 aa18.04■□□□□ 0.48
SQLE-205ENST00000521232 FOXR2Q6PJQ5 311 aa18.04■□□□□ 0.48
SQLE-205ENST00000521232 CLEC20AQ6ZU45 233 aa18.04■□□□□ 0.48
SQLE-205ENST00000521232 ADGRG2Q8IZP9 1017 aa18.04■□□□□ 0.48
SQLE-205ENST00000521232 TATDN2Q93075 761 aa18.04■□□□□ 0.48
SQLE-205ENST00000521232 SLC35C1Q96A29 364 aa18.04■□□□□ 0.48
SQLE-205ENST00000521232 EXOC4Q96A65 974 aa18.04■□□□□ 0.48
SQLE-205ENST00000521232 CEP63Q96MT8 703 aa18.04■□□□□ 0.48
SQLE-205ENST00000521232 P2RY13Q9BPV8 354 aa18.04■□□□□ 0.48
SQLE-205ENST00000521232 METTL14Q9HCE5 456 aaKnown RBP18.04■□□□□ 0.48
SQLE-205ENST00000521232 PNPLA8Q9NP80 782 aa18.04■□□□□ 0.48
SQLE-205ENST00000521232 CISHQ9NSE2 258 aa18.04■□□□□ 0.48
SQLE-205ENST00000521232 COCHO43405 550 aa18.03■□□□□ 0.48
SQLE-205ENST00000521232 NFATC1O95644 943 aa18.03■□□□□ 0.48
SQLE-205ENST00000521232 MBL2P11226 248 aaPredicted RBP18.03■□□□□ 0.48
SQLE-205ENST00000521232 PPP1R26Q5T8A7 1209 aaPredicted RBP18.03■□□□□ 0.48
SQLE-205ENST00000521232 DDX42Q86XP3 938 aaKnown RBP eCLIP18.03■□□□□ 0.48
SQLE-205ENST00000521232 DUSP9Q99956 384 aaKnown RBP18.03■□□□□ 0.48
SQLE-205ENST00000521232 DUSP16Q9BY84 665 aa18.03■□□□□ 0.48
SQLE-205ENST00000521232 C2orf42Q9NWW7 574 aa18.03■□□□□ 0.48
SQLE-205ENST00000521232 SMPD4Q9NXE4 827 aa18.03■□□□□ 0.48
SQLE-205ENST00000521232 GMIPQ9P107 970 aa18.03■□□□□ 0.48
SQLE-205ENST00000521232 MYOFQ9NZM1 2061 aa18.02■□□□□ 0.48
SQLE-205ENST00000521232 K7ESF4 209 aa18.02■□□□□ 0.48
SQLE-205ENST00000521232 SLC9A3R1O14745 358 aaPredicted RBP18.02■□□□□ 0.48
SQLE-205ENST00000521232 EGFP01133 1207 aa18.02■□□□□ 0.48
SQLE-205ENST00000521232 HOXA6P31267 233 aa18.02■□□□□ 0.48
SQLE-205ENST00000521232 PGFP49763 221 aa18.02■□□□□ 0.48
SQLE-205ENST00000521232 FBXO43Q4G163 708 aa18.02■□□□□ 0.48
SQLE-205ENST00000521232 ZNF394Q53GI3 561 aa18.02■□□□□ 0.48
SQLE-205ENST00000521232 NAIF1Q69YI7 327 aaPredicted RBP18.02■□□□□ 0.48
SQLE-205ENST00000521232 TTI2Q6NXR4 508 aa18.02■□□□□ 0.48
SQLE-205ENST00000521232 SLC4A11Q8NBS3 891 aa18.02■□□□□ 0.48
SQLE-205ENST00000521232 CD101Q93033 1021 aa18.02■□□□□ 0.48
SQLE-205ENST00000521232 TMEM176AQ96HP8 235 aa18.02■□□□□ 0.48
SQLE-205ENST00000521232 ZFRQ96KR1 1074 aaKnown RBP18.02■□□□□ 0.48
SQLE-205ENST00000521232 HEXIM2Q96MH2 286 aaKnown RBP18.02■□□□□ 0.48
SQLE-205ENST00000521232 EPC1Q9H2F5 836 aa18.02■□□□□ 0.48
SQLE-205ENST00000521232 CCSER2Q9H7U1 834 aa18.02■□□□□ 0.48
SQLE-205ENST00000521232 CHMP5Q9NZZ3 219 aa18.02■□□□□ 0.48
SQLE-205ENST00000521232 CFAP97Q9P2B7 532 aa18.02■□□□□ 0.48
SQLE-205ENST00000521232 SCML2Q9UQR0 700 aa18.02■□□□□ 0.48
SQLE-205ENST00000521232 DMXL1Q9Y485 3027 aa18.01■□□□□ 0.47
SQLE-205ENST00000521232 E2F8A0AVK6 867 aa18.01■□□□□ 0.47
SQLE-205ENST00000521232 CHURC1-FNTBB4DL54 471 aa18.01■□□□□ 0.47
SQLE-205ENST00000521232 PMM2O15305 246 aa18.01■□□□□ 0.47
SQLE-205ENST00000521232 ATG13O75143 517 aa18.01■□□□□ 0.47
SQLE-205ENST00000521232 RAD23BP54727 409 aa18.01■□□□□ 0.47
SQLE-205ENST00000521232 GPRIN1Q7Z2K8 1008 aa18.01■□□□□ 0.47
SQLE-205ENST00000521232 NELFBQ8WX92 580 aa18.01■□□□□ 0.47
SQLE-205ENST00000521232 RUBCNQ92622 972 aa18.01■□□□□ 0.47
SQLE-205ENST00000521232 ARID3AQ99856 593 aa18.01■□□□□ 0.47
SQLE-205ENST00000521232 TLR8Q9NR97 1041 aaKnown RBP18.01■□□□□ 0.47
SQLE-205ENST00000521232 TBC1D14Q9P2M4 693 aa18.01■□□□□ 0.47
SQLE-205ENST00000521232 BICDL2A1A5D9 508 aa18■□□□□ 0.47
SQLE-205ENST00000521232 TLR5O60602 858 aa18■□□□□ 0.47
SQLE-205ENST00000521232 ACO1P21399 889 aaKnown RBP18■□□□□ 0.47
SQLE-205ENST00000521232 FMO5P49326 533 aa18■□□□□ 0.47
SQLE-205ENST00000521232 KIF11P52732 1056 aa18■□□□□ 0.47
SQLE-205ENST00000521232 UBE2HP62256 183 aa18■□□□□ 0.47
SQLE-205ENST00000521232 CUL2Q13617 745 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms