RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 HRGP04196 525 aa8.17□□□□□ -1.1
SDCBP-208ENST00000520228 DEFB115Q30KQ5 88 aa8.17□□□□□ -1.1
SDCBP-208ENST00000520228 MED25Q71SY5 747 aa8.17□□□□□ -1.1
SDCBP-208ENST00000520228 PPP1R3BQ86XI6 285 aa8.17□□□□□ -1.1
SDCBP-208ENST00000520228 PALM2Q8IXS6 379 aa8.17□□□□□ -1.1
SDCBP-208ENST00000520228 CLASRPQ8N2M8 674 aaKnown RBP8.17□□□□□ -1.1
SDCBP-208ENST00000520228 FAM43AQ8N2R8 423 aa8.17□□□□□ -1.1
SDCBP-208ENST00000520228 DEFB129Q9H1M3 183 aa8.17□□□□□ -1.1
SDCBP-208ENST00000520228 MRPL46Q9H2W6 279 aaKnown RBP8.17□□□□□ -1.1
SDCBP-208ENST00000520228 TDRD3Q9H7E2 651 aaKnown RBP8.17□□□□□ -1.1
SDCBP-208ENST00000520228 ZNF703Q9H7S9 590 aaPredicted RBP8.17□□□□□ -1.1
SDCBP-208ENST00000520228 VEZTQ9HBM0 779 aa8.17□□□□□ -1.1
SDCBP-208ENST00000520228 GBA2Q9HCG7 927 aaPredicted RBP8.17□□□□□ -1.1
SDCBP-208ENST00000520228 IL1RAPL2Q9NP60 686 aa8.17□□□□□ -1.1
SDCBP-208ENST00000520228 ZNF70Q9UC06 446 aaPredicted RBP8.17□□□□□ -1.1
SDCBP-208ENST00000520228 FEZ2Q9UHY8 353 aaPredicted RBP8.17□□□□□ -1.1
SDCBP-208ENST00000520228 DBNLQ9UJU6 430 aaKnown RBP8.17□□□□□ -1.1
SDCBP-208ENST00000520228 L1RE1Q9UN81 338 aa8.17□□□□□ -1.1
SDCBP-208ENST00000520228 CHST2Q9Y4C5 530 aa8.17□□□□□ -1.1
SDCBP-208ENST00000520228 SALL1Q9NSC2 1324 aa8.17□□□□□ -1.1
SDCBP-208ENST00000520228 ADAMTSL1Q8N6G6 1762 aa8.17□□□□□ -1.1
SDCBP-208ENST00000520228 H3BUI4 141 aa8.16□□□□□ -1.1
SDCBP-208ENST00000520228 HAUS5O94927 633 aa8.16□□□□□ -1.1
SDCBP-208ENST00000520228 COL1A1P02452 1464 aaPredicted RBP8.16□□□□□ -1.1
SDCBP-208ENST00000520228 IFIT2P09913 472 aaKnown RBP8.16□□□□□ -1.1
SDCBP-208ENST00000520228 APOBEC3AP31941 199 aaPredicted RBP8.16□□□□□ -1.1
SDCBP-208ENST00000520228 NF2P35240 595 aa8.16□□□□□ -1.1
SDCBP-208ENST00000520228 GNALP38405 381 aa8.16□□□□□ -1.1
SDCBP-208ENST00000520228 CNTNAP1P78357 1384 aa8.16□□□□□ -1.1
SDCBP-208ENST00000520228 NHLH2Q02577 135 aa8.16□□□□□ -1.1
SDCBP-208ENST00000520228 AOX1Q06278 1338 aa8.16□□□□□ -1.1
SDCBP-208ENST00000520228 CRHR2Q13324 411 aa8.16□□□□□ -1.1
SDCBP-208ENST00000520228 TOB2Q14106 344 aaPredicted RBP8.16□□□□□ -1.1
SDCBP-208ENST00000520228 SCN9AQ15858 1988 aa8.16□□□□□ -1.1
SDCBP-208ENST00000520228 FRMPD2Q68DX3 1309 aaPredicted RBP8.16□□□□□ -1.1
SDCBP-208ENST00000520228 APOBEC3HQ6NTF7 200 aaKnown RBP8.16□□□□□ -1.1
SDCBP-208ENST00000520228 SRGAP1Q7Z6B7 1085 aa8.16□□□□□ -1.1
SDCBP-208ENST00000520228 DAAM2Q86T65 1068 aa8.16□□□□□ -1.1
SDCBP-208ENST00000520228 DZIP1Q86YF9 867 aaKnown RBP8.16□□□□□ -1.1
SDCBP-208ENST00000520228 IL17DQ8TAD2 202 aa8.16□□□□□ -1.1
SDCBP-208ENST00000520228 TIFAQ96CG3 184 aa8.16□□□□□ -1.1
SDCBP-208ENST00000520228 C1orf43Q9BWL3 253 aa8.16□□□□□ -1.1
SDCBP-208ENST00000520228 SPEF2Q9C093 1822 aa8.16□□□□□ -1.1
SDCBP-208ENST00000520228 TMOD2Q9NZR1 351 aa8.16□□□□□ -1.1
SDCBP-208ENST00000520228 CEP72Q9P209 647 aa8.16□□□□□ -1.1
SDCBP-208ENST00000520228 TCP10L2B9ZVM9 353 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 TPP1O14773 563 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 ZBED1O96006 694 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 GCSHP23434 173 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 PIK3CGP48736 1102 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 HUNKP57058 714 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 TBX4P57082 545 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 FKBP1BP68106 108 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 GRM1Q13255 1194 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 TNFAIP1Q13829 316 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 HLTFQ14527 1009 aaKnown RBP eCLIP8.15□□□□□ -1.1
SDCBP-208ENST00000520228 SUPT20HL1Q3ZLR7 823 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 CCDC157Q569K6 752 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 SPDYAQ5MJ70 313 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 AGAP9Q5VTM2 703 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 SWSAP1Q6NVH7 229 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 ZNF365Q70YC5 407 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 RHOT2Q8IXI1 618 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 SH2D3CQ8N5H7 860 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 FITM2Q8N6M3 262 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 EXTL1Q92935 676 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 PACSIN1Q9BY11 444 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 LRRCC1Q9C099 1032 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 DCTPP1Q9H773 170 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 FAM204AQ9H8W3 233 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 RAI14Q9P0K7 980 aa8.15□□□□□ -1.1
SDCBP-208ENST00000520228 WDR33Q9C0J8 1336 aaKnown RBP8.14□□□□□ -1.11
SDCBP-208ENST00000520228 CDHR4A6H8M9 788 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 AHRRA9YTQ3 701 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 DIRC3C9JPN6 131 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 C1QTNF3-AMACRE9PGA6 284 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 TRIM24O15164 1050 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 MATN4O95460 622 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 ITGB1P05556 798 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 LDHCP07864 332 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 CACNB3P54284 484 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 GSTO1P78417 241 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 MECOMQ03112 1051 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 FGL2Q14314 439 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 KIF22Q14807 665 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 LLGL1Q15334 1064 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 RABL3Q5HYI8 236 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 EMC10Q5UCC4 262 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 FKBP1CQ5VVH2 108 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 CDC42EP5Q6NZY7 148 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 PDSS2Q86YH6 399 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 MTFMTQ96DP5 389 aaKnown RBP8.14□□□□□ -1.11
SDCBP-208ENST00000520228 CAPNS2Q96L46 248 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 NT5C1BQ96P26 610 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 DCLRE1CQ96SD1 692 aaKnown RBP8.14□□□□□ -1.11
SDCBP-208ENST00000520228 ARMT1Q9H993 441 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 ATP6V0A4Q9HBG4 840 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 ZDHHC8Q9ULC8 765 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 SLC45A2Q9UMX9 530 aa8.14□□□□□ -1.11
SDCBP-208ENST00000520228 PCDHA1Q9Y5I3 950 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms