RNA–Protein interactions for RNA: ENST00000520122.1

AP3B1-206, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 3

Gene AP3B1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-206ENST00000520122 PTCH1Q13635 1447 aa5.19□□□□□ -1.58
AP3B1-206ENST00000520122 ZC3H13Q5T200 1668 aaKnown RBP5.18□□□□□ -1.58
AP3B1-206ENST00000520122 ANKRD36BQ8N2N9 1353 aa5.18□□□□□ -1.58
AP3B1-206ENST00000520122 FRMPD1Q5SYB0 1578 aa5.18□□□□□ -1.58
AP3B1-206ENST00000520122 SSH2Q76I76 1423 aa5.18□□□□□ -1.58
AP3B1-206ENST00000520122 FAM90A10PA6NDY2 464 aa5.18□□□□□ -1.58
AP3B1-206ENST00000520122 REC8O95072 547 aa5.18□□□□□ -1.58
AP3B1-206ENST00000520122 SMARCA1P28370 1054 aa5.18□□□□□ -1.58
AP3B1-206ENST00000520122 KCNJ5P48544 419 aa5.18□□□□□ -1.58
AP3B1-206ENST00000520122 ACAP2Q15057 778 aa5.18□□□□□ -1.58
AP3B1-206ENST00000520122 ZSCAN23Q3MJ62 389 aa5.18□□□□□ -1.58
AP3B1-206ENST00000520122 SPATS2Q86XZ4 545 aaKnown RBP5.18□□□□□ -1.58
AP3B1-206ENST00000520122 FAM109AQ8N4B1 249 aa5.18□□□□□ -1.58
AP3B1-206ENST00000520122 TCP11L2Q8N4U5 519 aa5.18□□□□□ -1.58
AP3B1-206ENST00000520122 ACRBPQ8NEB7 543 aa5.18□□□□□ -1.58
AP3B1-206ENST00000520122 WDR66Q8TBY9 1149 aa5.18□□□□□ -1.58
AP3B1-206ENST00000520122 SIDT1Q9NXL6 827 aaKnown RBP5.18□□□□□ -1.58
AP3B1-206ENST00000520122 SH2B3Q9UQQ2 575 aa5.18□□□□□ -1.58
AP3B1-206ENST00000520122 RPGRIP1LQ68CZ1 1315 aa5.18□□□□□ -1.58
AP3B1-206ENST00000520122 ABCC1P33527 1531 aa5.18□□□□□ -1.58
AP3B1-206ENST00000520122 ARHGAP5Q13017 1502 aa5.18□□□□□ -1.58
AP3B1-206ENST00000520122 ZFYVE9O95405 1425 aa5.17□□□□□ -1.58
AP3B1-206ENST00000520122 POC1B-GALNT4F8VUJ3 575 aa5.17□□□□□ -1.58
AP3B1-206ENST00000520122 F2RL2O00254 374 aa5.17□□□□□ -1.58
AP3B1-206ENST00000520122 ENPP3O14638 875 aa5.17□□□□□ -1.58
AP3B1-206ENST00000520122 USP1O94782 785 aa5.17□□□□□ -1.58
AP3B1-206ENST00000520122 IL6RP08887 468 aaPredicted RBP5.17□□□□□ -1.58
AP3B1-206ENST00000520122 LIPAP38571 399 aa5.17□□□□□ -1.58
AP3B1-206ENST00000520122 ANAPC15P60006 121 aa5.17□□□□□ -1.58
AP3B1-206ENST00000520122 ERVK-21P61565 698 aa5.17□□□□□ -1.58
AP3B1-206ENST00000520122 KLF1Q13351 362 aaPredicted RBP5.17□□□□□ -1.58
AP3B1-206ENST00000520122 ICE2Q659A1 982 aa5.17□□□□□ -1.58
AP3B1-206ENST00000520122 SFRP4Q6FHJ7 346 aaPredicted RBP5.17□□□□□ -1.58
AP3B1-206ENST00000520122 CAVIN1Q6NZI2 390 aaKnown RBP5.17□□□□□ -1.58
AP3B1-206ENST00000520122 TMEM108Q6UXF1 575 aa5.17□□□□□ -1.58
AP3B1-206ENST00000520122 MAVSQ7Z434 540 aa5.17□□□□□ -1.58
AP3B1-206ENST00000520122 GALNT4Q8N4A0 578 aa5.17□□□□□ -1.58
AP3B1-206ENST00000520122 AFAP1L2Q8N4X5 818 aa5.17□□□□□ -1.58
AP3B1-206ENST00000520122 C16orf52Q8NHV5 167 aa5.17□□□□□ -1.58
AP3B1-206ENST00000520122 COG1Q8WTW3 980 aa5.17□□□□□ -1.58
AP3B1-206ENST00000520122 KAT5Q92993 513 aa5.17□□□□□ -1.58
AP3B1-206ENST00000520122 RITA1Q96K30 269 aa5.17□□□□□ -1.58
AP3B1-206ENST00000520122 VRK1Q99986 396 aaPredicted RBP5.17□□□□□ -1.58
AP3B1-206ENST00000520122 LMBRD1Q9NUN5 540 aa5.17□□□□□ -1.58
AP3B1-206ENST00000520122 MRPS18AQ9NVS2 196 aaKnown RBP5.17□□□□□ -1.58
AP3B1-206ENST00000520122 KIF1BO60333 1816 aa5.17□□□□□ -1.58
AP3B1-206ENST00000520122 ANKRD26Q9UPS8 1709 aa5.17□□□□□ -1.58
AP3B1-206ENST00000520122 PLCH2O75038 1416 aa5.16□□□□□ -1.58
AP3B1-206ENST00000520122 UBE2Q2LH0YL09 131 aa5.16□□□□□ -1.58
AP3B1-206ENST00000520122 DSCR3O14972 297 aa5.16□□□□□ -1.58
AP3B1-206ENST00000520122 GPR39O43194 453 aa5.16□□□□□ -1.58
AP3B1-206ENST00000520122 TRIM27P14373 513 aa5.16□□□□□ -1.58
AP3B1-206ENST00000520122 MALP21145 153 aa5.16□□□□□ -1.58
AP3B1-206ENST00000520122 ATP5F1P24539 256 aaPredicted RBP5.16□□□□□ -1.58
AP3B1-206ENST00000520122 PHKA1P46020 1223 aa5.16□□□□□ -1.58
AP3B1-206ENST00000520122 DHX8Q14562 1220 aaKnown RBP5.16□□□□□ -1.58
AP3B1-206ENST00000520122 ZNF268Q14587 947 aaPredicted RBP5.16□□□□□ -1.58
AP3B1-206ENST00000520122 KHDC1Q4VXA5 237 aaKnown RBP5.16□□□□□ -1.58
AP3B1-206ENST00000520122 SLC4A10Q6U841 1118 aa5.16□□□□□ -1.58
AP3B1-206ENST00000520122 SERPINA13PQ6UXR4 307 aa5.16□□□□□ -1.58
AP3B1-206ENST00000520122 LHFPL2Q6ZUX7 228 aa5.16□□□□□ -1.58
AP3B1-206ENST00000520122 PARS2Q7L3T8 475 aaKnown RBP5.16□□□□□ -1.58
AP3B1-206ENST00000520122 MORC1Q86VD1 984 aa5.16□□□□□ -1.58
AP3B1-206ENST00000520122 FSD1LQ9BXM9 530 aa5.16□□□□□ -1.58
AP3B1-206ENST00000520122 GPR35Q9HC97 309 aa5.16□□□□□ -1.58
AP3B1-206ENST00000520122 SMC4Q9NTJ3 1288 aa5.16□□□□□ -1.58
AP3B1-206ENST00000520122 ATP6V1DQ9Y5K8 247 aa5.16□□□□□ -1.58
AP3B1-206ENST00000520122 ADGRB3O60242 1522 aa5.16□□□□□ -1.58
AP3B1-206ENST00000520122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.16□□□□□ -1.58
AP3B1-206ENST00000520122 NSD3Q9BZ95 1437 aa5.15□□□□□ -1.58
AP3B1-206ENST00000520122 CCDC154A6NI56 674 aa5.15□□□□□ -1.59
AP3B1-206ENST00000520122 CTIFO43310 598 aaKnown RBP5.15□□□□□ -1.59
AP3B1-206ENST00000520122 HTRA2O43464 458 aaPredicted RBP5.15□□□□□ -1.59
AP3B1-206ENST00000520122 EXOC3O60645 756 aa5.15□□□□□ -1.59
AP3B1-206ENST00000520122 OAZ2O95190 189 aa5.15□□□□□ -1.59
AP3B1-206ENST00000520122 CAVIN2O95810 425 aa5.15□□□□□ -1.59
AP3B1-206ENST00000520122 FESP07332 822 aa5.15□□□□□ -1.59
AP3B1-206ENST00000520122 RARBP10826 455 aa5.15□□□□□ -1.59
AP3B1-206ENST00000520122 GPSM2P81274 684 aa5.15□□□□□ -1.59
AP3B1-206ENST00000520122 RBMS2Q15434 407 aaKnown RBP5.15□□□□□ -1.59
AP3B1-206ENST00000520122 TWIST1Q15672 202 aa5.15□□□□□ -1.59
AP3B1-206ENST00000520122 TBC1D25Q3MII6 688 aa5.15□□□□□ -1.59
AP3B1-206ENST00000520122 C3orf36Q3SXR2 165 aa5.15□□□□□ -1.59
AP3B1-206ENST00000520122 PGM2L1Q6PCE3 622 aa5.15□□□□□ -1.59
AP3B1-206ENST00000520122 LAYNQ6UX15 382 aa5.15□□□□□ -1.59
AP3B1-206ENST00000520122 ITPRIPQ8IWB1 547 aa5.15□□□□□ -1.59
AP3B1-206ENST00000520122 CCDC146Q8IYE0 955 aa5.15□□□□□ -1.59
AP3B1-206ENST00000520122 TSPY26PQ9H489 355 aa5.15□□□□□ -1.59
AP3B1-206ENST00000520122 OGFRQ9NZT2 677 aa5.15□□□□□ -1.59
AP3B1-206ENST00000520122 TUBD1Q9UJT1 453 aa5.15□□□□□ -1.59
AP3B1-206ENST00000520122 SERTAD3Q9UJW9 196 aa5.15□□□□□ -1.59
AP3B1-206ENST00000520122 LIMCH1Q9UPQ0 1083 aa5.15□□□□□ -1.59
AP3B1-206ENST00000520122 IPPQ9Y573 584 aa5.15□□□□□ -1.59
AP3B1-206ENST00000520122 FAM135BQ49AJ0 1406 aa5.14□□□□□ -1.59
AP3B1-206ENST00000520122 TTC3P53804 2025 aa5.14□□□□□ -1.59
AP3B1-206ENST00000520122 EFCAB6Q5THR3 1501 aa5.14□□□□□ -1.59
AP3B1-206ENST00000520122 ZFYVE16Q7Z3T8 1539 aa5.14□□□□□ -1.59
AP3B1-206ENST00000520122 CD8B2A6NJW9 211 aa5.14□□□□□ -1.59
AP3B1-206ENST00000520122 H7C1Q1 480 aa5.14□□□□□ -1.59
AP3B1-206ENST00000520122 GNAI2P04899 355 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms