RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 DUOXA2Q1HG44 320 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 WDR72Q3MJ13 1102 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 ZCWPW2Q504Y3 356 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 EMC10Q5UCC4 262 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 ERMP1Q7Z2K6 904 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 DGLUCYQ7Z3D6 616 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 WDR5BQ86VZ2 330 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 SMYD4Q8IYR2 804 aaPredicted RBP9.21□□□□□ -0.94
PABPC1-213ENST00000519848 XXYLT1Q8NBI6 393 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 RPLP0P6Q8NHW5 317 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 MYCBPAPQ8TBZ2 947 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 PARD3BQ8TEW8 1205 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 WHAMMQ8TF30 809 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 OSCP1Q8WVF1 389 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 MRPS31Q92665 395 aaKnown RBP9.21□□□□□ -0.94
PABPC1-213ENST00000519848 E2F7Q96AV8 911 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 EEF2KMTQ96G04 330 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 FUBP3Q96I24 572 aaKnown RBP eCLIP9.21□□□□□ -0.94
PABPC1-213ENST00000519848 SPATA17Q96L03 361 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 MMS19Q96T76 1030 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 CUEDC2Q9H467 287 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 CCSER2Q9H7U1 834 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 CD93Q9NPY3 652 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 SEMA4GQ9NTN9 838 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 NXF1Q9UBU9 619 aaKnown RBP9.21□□□□□ -0.94
PABPC1-213ENST00000519848 ARHGAP26Q9UNA1 814 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 MAPK8IP1Q9UQF2 711 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 CPQQ9Y646 472 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 ADGRG1Q9Y653 693 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 UBE4BO95155 1302 aa9.21□□□□□ -0.94
PABPC1-213ENST00000519848 SDK1Q7Z5N4 2213 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 J3QL48 77 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 NCAM2O15394 837 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 TACC1O75410 805 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 STAU1O95793 577 aaKnown RBP9.2□□□□□ -0.94
PABPC1-213ENST00000519848 SLFN14P0C7P3 912 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 TCF3P15923 654 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 PCSK1P29120 753 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 HOXA6P31267 233 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 LHX1P48742 406 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 SEC13P55735 322 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 RPL10AP62906 217 aaKnown RBP9.2□□□□□ -0.94
PABPC1-213ENST00000519848 PLCB2Q00722 1185 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 SIM2Q14190 667 aaPredicted RBP9.2□□□□□ -0.94
PABPC1-213ENST00000519848 LRRC32Q14392 662 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 ZACNQ401N2 412 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 DGKKQ5KSL6 1271 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 LAIR1Q6GTX8 287 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 PRR23CQ6ZRP0 262 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 FILIP1Q7Z7B0 1213 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 ACOT1Q86TX2 421 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 LONP2Q86WA8 852 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 MIB1Q86YT6 1006 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 C12orf29Q8N999 325 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 IQUBQ8NA54 791 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 B3GALNT2Q8NCR0 500 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 OR6B3Q8NGW1 331 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 SNIP1Q8TAD8 396 aaKnown RBP9.2□□□□□ -0.94
PABPC1-213ENST00000519848 SPATA18Q8TC71 538 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 CACTINQ8WUQ7 758 aaKnown RBP9.2□□□□□ -0.94
PABPC1-213ENST00000519848 SEMA4DQ92854 862 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 ERCC4Q92889 916 aaPredicted RBP9.2□□□□□ -0.94
PABPC1-213ENST00000519848 ERLEC1Q96DZ1 483 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 MSANTD3Q96H12 275 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 ZNF396Q96N95 335 aaPredicted RBP9.2□□□□□ -0.94
PABPC1-213ENST00000519848 GCNAQ96QF7 691 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 ARID3AQ99856 593 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 P2RY13Q9BPV8 354 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 IER2Q9BTL4 223 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 TPSD1Q9BZJ3 242 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 DUSP15Q9H1R2 295 aaPredicted RBP9.2□□□□□ -0.94
PABPC1-213ENST00000519848 VRTNQ9H8Y1 702 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 KIF9Q9HAQ2 790 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 NMUR1Q9HB89 426 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 CD248Q9HCU0 757 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 FAM49BQ9NUQ9 324 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 DUS2Q9NX74 493 aaKnown RBP9.2□□□□□ -0.94
PABPC1-213ENST00000519848 GMIPQ9P107 970 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 USP18Q9UMW8 372 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 PCDH15Q96QU1 1955 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 ABCA7Q8IZY2 2146 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 SPTBN2O15020 2390 aa9.2□□□□□ -0.94
PABPC1-213ENST00000519848 MYH10P35580 1976 aa9.19□□□□□ -0.94
PABPC1-213ENST00000519848 TRAV19A0A0A6YYK7 116 aa9.19□□□□□ -0.94
PABPC1-213ENST00000519848 FAM237AA0A1B0GTK4 181 aa9.19□□□□□ -0.94
PABPC1-213ENST00000519848 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.19□□□□□ -0.94
PABPC1-213ENST00000519848 TM4SF5O14894 197 aa9.19□□□□□ -0.94
PABPC1-213ENST00000519848 KIAA0391O15091 583 aaKnown RBP9.19□□□□□ -0.94
PABPC1-213ENST00000519848 MDM4O15151 490 aa9.19□□□□□ -0.94
PABPC1-213ENST00000519848 ADAM23O75077 832 aa9.19□□□□□ -0.94
PABPC1-213ENST00000519848 AKAP3O75969 853 aa9.19□□□□□ -0.94
PABPC1-213ENST00000519848 TBX18O95935 607 aa9.19□□□□□ -0.94
PABPC1-213ENST00000519848 NR3C1P04150 777 aa9.19□□□□□ -0.94
PABPC1-213ENST00000519848 USP17L7P0C7H9 530 aa9.19□□□□□ -0.94
PABPC1-213ENST00000519848 ZDHHC11BP0C7U3 371 aa9.19□□□□□ -0.94
PABPC1-213ENST00000519848 TNNI1P19237 187 aa9.19□□□□□ -0.94
PABPC1-213ENST00000519848 DDX6P26196 483 aaKnown RBP eCLIP9.19□□□□□ -0.94
PABPC1-213ENST00000519848 GRIK1P39086 918 aa9.19□□□□□ -0.94
PABPC1-213ENST00000519848 SLC5A3P53794 718 aa9.19□□□□□ -0.94
PABPC1-213ENST00000519848 PMS1P54277 932 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms