RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 SMYD3Q9H7B4 428 aa11.54□□□□□ -0.56
PVT1-208ENST00000519481 POLR3BQ9NW08 1133 aaPredicted RBP11.54□□□□□ -0.56
PVT1-208ENST00000519481 COMMD8Q9NX08 183 aa11.54□□□□□ -0.56
PVT1-208ENST00000519481 SH3BP1Q9Y3L3 701 aa11.54□□□□□ -0.56
PVT1-208ENST00000519481 NME7Q9Y5B8 376 aa11.54□□□□□ -0.56
PVT1-208ENST00000519481 GREB1Q4ZG55 1949 aa11.53□□□□□ -0.56
PVT1-208ENST00000519481 PDXKO00764 312 aa11.53□□□□□ -0.56
PVT1-208ENST00000519481 CALUO43852 315 aaPredicted RBP11.53□□□□□ -0.56
PVT1-208ENST00000519481 AP1G2O75843 785 aa11.53□□□□□ -0.56
PVT1-208ENST00000519481 C4BPAP04003 597 aaKnown RBP11.53□□□□□ -0.56
PVT1-208ENST00000519481 ADRB1P08588 477 aa11.53□□□□□ -0.56
PVT1-208ENST00000519481 ADH5P11766 374 aa11.53□□□□□ -0.56
PVT1-208ENST00000519481 CACNA2D1P54289 1103 aa11.53□□□□□ -0.56
PVT1-208ENST00000519481 CLDN10P78369 228 aa11.53□□□□□ -0.56
PVT1-208ENST00000519481 STK4Q13043 487 aa11.53□□□□□ -0.56
PVT1-208ENST00000519481 KMT5BQ4FZB7 885 aa11.53□□□□□ -0.56
PVT1-208ENST00000519481 HSF5Q4G112 596 aaPredicted RBP11.53□□□□□ -0.56
PVT1-208ENST00000519481 CEP135Q66GS9 1140 aa11.53□□□□□ -0.56
PVT1-208ENST00000519481 TTC30AQ86WT1 665 aa11.53□□□□□ -0.56
PVT1-208ENST00000519481 SPRYD3Q8NCJ5 442 aa11.53□□□□□ -0.56
PVT1-208ENST00000519481 SPDYE1Q8NFV5 336 aaPredicted RBP11.53□□□□□ -0.56
PVT1-208ENST00000519481 TMC2Q8TDI7 906 aa11.53□□□□□ -0.56
PVT1-208ENST00000519481 EZH1Q92800 747 aaPredicted RBP11.53□□□□□ -0.56
PVT1-208ENST00000519481 GZF1Q9H116 711 aaPredicted RBP11.53□□□□□ -0.56
PVT1-208ENST00000519481 FBXO44Q9H4M3 255 aa11.53□□□□□ -0.56
PVT1-208ENST00000519481 DMAC2Q9NW81 257 aa11.53□□□□□ -0.56
PVT1-208ENST00000519481 CHORDC1Q9UHD1 332 aaPredicted RBP11.53□□□□□ -0.56
PVT1-208ENST00000519481 MMP17Q9ULZ9 603 aa11.53□□□□□ -0.56
PVT1-208ENST00000519481 CNOT1A5YKK6 2376 aaKnown RBP11.53□□□□□ -0.56
PVT1-208ENST00000519481 PTPRDP23468 1912 aa11.52□□□□□ -0.56
PVT1-208ENST00000519481 K7EQS6 105 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 IKBKBO14920 756 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 COCHO43405 550 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 ACTN4O43707 911 aaKnown RBP11.52□□□□□ -0.57
PVT1-208ENST00000519481 KLRC4O43908 158 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 CAVIN2O95810 425 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 NR3C1P04150 777 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 PFKFB1P16118 471 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 CMA1P23946 247 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 GRIA2P42262 883 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 PIK3CAP42336 1068 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 TUBP50607 506 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 SLC5A3P53794 718 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 KRT85P78386 507 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 ZXDBP98169 803 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 CREB5Q02930 508 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 GAD2Q05329 585 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 GOLGA8FQ08AF8 430 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 GOLGA8DPQ0D2H9 430 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 ZACNQ401N2 412 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 EOGTQ5NDL2 527 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 PLA2G2CQ5R387 149 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 STPG1Q5TH74 334 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 ANO7Q6IWH7 933 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 ACOT1Q86TX2 421 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 UNC93AQ86WB7 457 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 CCDC33Q8N5R6 958 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 KIAA0895Q8NCT3 520 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 CCDC150Q8NCX0 1101 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 PLEKHO2Q8TD55 490 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 TMEM174Q8WUU8 243 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 CNOT6LQ96LI5 555 aaKnown RBP11.52□□□□□ -0.57
PVT1-208ENST00000519481 SPATA32Q96LK8 384 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 KCNK16Q96T55 309 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 TPSD1Q9BZJ3 242 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 DUSP15Q9H1R2 295 aaPredicted RBP11.52□□□□□ -0.57
PVT1-208ENST00000519481 POLMQ9NP87 494 aaPredicted RBP11.52□□□□□ -0.57
PVT1-208ENST00000519481 ARHGEF4Q9NR80 690 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 TLR8Q9NR97 1041 aaKnown RBP11.52□□□□□ -0.57
PVT1-208ENST00000519481 KRT82Q9NSB4 513 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 TMEM30AQ9NV96 361 aa11.52□□□□□ -0.57
PVT1-208ENST00000519481 HELZP42694 1942 aaKnown RBP11.52□□□□□ -0.57
PVT1-208ENST00000519481 ACACBO00763 2458 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 A0A1B0GVL5 298 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 SCAMP3O14828 347 aaKnown RBP11.51□□□□□ -0.57
PVT1-208ENST00000519481 DCLK1O15075 740 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 KAT7O95251 611 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 VNN1O95497 513 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 KLF8O95600 359 aaPredicted RBP11.51□□□□□ -0.57
PVT1-208ENST00000519481 KRT13P13646 458 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 TIE1P35590 1138 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 SYKP43405 635 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 TNFRSF4P43489 277 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 NDST1P52848 882 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 BYSLQ13895 437 aaKnown RBP11.51□□□□□ -0.57
PVT1-208ENST00000519481 CRY1Q16526 586 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 LY6G5CQ5SRR4 150 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 SNX30Q5VWJ9 437 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 RNF43Q68DV7 783 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 RHBDF2Q6PJF5 856 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 SV2AQ7L0J3 742 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 TRMT11Q7Z4G4 463 aaKnown RBP11.51□□□□□ -0.57
PVT1-208ENST00000519481 FUKQ8N0W3 1084 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 SCAMP5Q8TAC9 235 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 CCDC34Q96HJ3 373 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 SPACA7Q96KW9 195 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 CNTNAP3BQ96NU0 1288 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 CNTNAP3Q9BZ76 1288 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 KCTD10Q9H3F6 313 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 IL37Q9NZH6 218 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms