RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 EXD1Q8NHP7 514 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 PHOSPHO2Q8TCD6 241 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 FNIP1Q8TF40 1166 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 MAGOHBQ96A72 148 aaKnown RBP15.2■□□□□ 0.02
CLN8-204ENST00000519254 PCED1BQ96HM7 432 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 TTPALQ9BTX7 342 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 VN1R3Q9BXE9 311 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 ST7Q9NRC1 585 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 METTL5Q9NRN9 209 aaKnown RBP15.2■□□□□ 0.02
CLN8-204ENST00000519254 SPG21Q9NZD8 308 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 PCYOX1Q9UHG3 505 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 MTUS1Q9ULD2 1270 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 E5RJQ4 531 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 C2CD2LO14523 706 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 OAZ2O95190 189 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 FAM153BP0C7A2 387 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 PSMA2P25787 234 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 ECHS1P30084 290 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 GJC1P36383 396 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 RGS7P49802 495 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 ARPP19P56211 112 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 DR1Q01658 176 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 DHX34Q14147 1143 aaKnown RBP15.19■□□□□ 0.02
CLN8-204ENST00000519254 SHHQ15465 462 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 FAM153CQ494X1 144 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 TXNRD3NBQ6F5E7 133 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 ZNF280DQ6N043 979 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 PRSS55Q6UWB4 352 aaPredicted RBP15.19■□□□□ 0.02
CLN8-204ENST00000519254 SND1Q7KZF4 910 aaKnown RBP eCLIP15.19■□□□□ 0.02
CLN8-204ENST00000519254 EMC1Q8N766 993 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 EIF1ADQ8N9N8 165 aaKnown RBP15.19■□□□□ 0.02
CLN8-204ENST00000519254 MYCBPAPQ8TBZ2 947 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 SLC35F5Q8WV83 523 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 CAVIN3Q969G5 261 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 MYLPFQ96A32 169 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 TRIM51Q9BSJ1 452 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 SLC4A5Q9BY07 1137 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 B3GNT5Q9BYG0 378 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 RHOBTB2Q9BYZ6 727 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 VIPAS39Q9H9C1 493 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 AAASQ9NRG9 546 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 KRT82Q9NSB4 513 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 TMLHEQ9NVH6 421 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 FAM153AQ9UHL3 310 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 PCDHB12Q9Y5F1 795 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 FAM187AA6NFU0 413 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 GRXCR1A8MXD5 290 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 PIK3R2O00459 728 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 SETSIPP0DME0 302 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 RALAP11233 206 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 COILP38432 576 aaPredicted RBP15.19■□□□□ 0.02
CLN8-204ENST00000519254 BCAT1P54687 386 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 PDE4CQ08493 712 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 CUL1Q13616 776 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 USP41Q3LFD5 358 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 SLC39A12Q504Y0 691 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 RASIP1Q5U651 963 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 FAM109BQ6ICB4 259 aaPredicted RBP15.19■□□□□ 0.02
CLN8-204ENST00000519254 KIAA1841Q6NSI8 718 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 FAM183BPQ6ZVS7 135 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 FAM35AQ86V20 835 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 LRRTM3Q86VH5 581 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 ANKRD52Q8NB46 1076 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 IPO4Q8TEX9 1081 aaKnown RBP15.19■□□□□ 0.02
CLN8-204ENST00000519254 RIN2Q8WYP3 895 aaPredicted RBP15.19■□□□□ 0.02
CLN8-204ENST00000519254 HNRNPABQ99729 332 aaKnown RBP15.19■□□□□ 0.02
CLN8-204ENST00000519254 LRRC19Q9H756 370 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 HPCAL4Q9UM19 191 aa15.19■□□□□ 0.02
CLN8-204ENST00000519254 DAPK3O43293 454 aa15.18■□□□□ 0.02
CLN8-204ENST00000519254 BST2Q10589 180 aaKnown RBP15.18■□□□□ 0.02
CLN8-204ENST00000519254 KLF1Q13351 362 aaPredicted RBP15.18■□□□□ 0.02
CLN8-204ENST00000519254 NNTQ13423 1086 aa15.18■□□□□ 0.02
CLN8-204ENST00000519254 FAM102AQ5T9C2 384 aaPredicted RBP15.18■□□□□ 0.02
CLN8-204ENST00000519254 OR6B2Q6IFH4 312 aa15.18■□□□□ 0.02
CLN8-204ENST00000519254 TRNP1Q6NT89 227 aa15.18■□□□□ 0.02
CLN8-204ENST00000519254 CCDC137Q6PK04 289 aaKnown RBP15.18■□□□□ 0.02
CLN8-204ENST00000519254 TMEM110Q86TL2 294 aa15.18■□□□□ 0.02
CLN8-204ENST00000519254 JAMLQ86YT9 394 aa15.18■□□□□ 0.02
CLN8-204ENST00000519254 CCDC50Q8IVM0 306 aa15.18■□□□□ 0.02
CLN8-204ENST00000519254 RCOR2Q8IZ40 523 aa15.18■□□□□ 0.02
CLN8-204ENST00000519254 STK32AQ8WU08 396 aa15.18■□□□□ 0.02
CLN8-204ENST00000519254 PIWIL1Q96J94 861 aaKnown RBP15.18■□□□□ 0.02
CLN8-204ENST00000519254 UBE2OQ9C0C9 1292 aaKnown RBP15.18■□□□□ 0.02
CLN8-204ENST00000519254 KLHL11Q9NVR0 708 aa15.18■□□□□ 0.02
CLN8-204ENST00000519254 UTP11Q9Y3A2 253 aaKnown RBP15.18■□□□□ 0.02
CLN8-204ENST00000519254 PI4K2BG5E9Z4 385 aa15.17■□□□□ 0.02
CLN8-204ENST00000519254 LRCH4O75427 683 aa15.17■□□□□ 0.02
CLN8-204ENST00000519254 AP1G2O75843 785 aa15.17■□□□□ 0.02
CLN8-204ENST00000519254 FAM200BP0CF97 657 aa15.17■□□□□ 0.02
CLN8-204ENST00000519254 CPB1P15086 417 aa15.17■□□□□ 0.02
CLN8-204ENST00000519254 MYOGP15173 224 aa15.17■□□□□ 0.02
CLN8-204ENST00000519254 PPM1AP35813 382 aa15.17■□□□□ 0.02
CLN8-204ENST00000519254 SLC25A11Q02978 314 aaKnown RBP15.17■□□□□ 0.02
CLN8-204ENST00000519254 SMC1AQ14683 1233 aaKnown RBP15.17■□□□□ 0.02
CLN8-204ENST00000519254 DUPD1Q68J44 220 aa15.17■□□□□ 0.02
CLN8-204ENST00000519254 FAM171BQ6P995 826 aa15.17■□□□□ 0.02
CLN8-204ENST00000519254 PAQR9Q6ZVX9 377 aa15.17■□□□□ 0.02
CLN8-204ENST00000519254 ANKS3Q6ZW76 656 aa15.17■□□□□ 0.02
CLN8-204ENST00000519254 MAIP1Q8WWC4 291 aa15.17■□□□□ 0.02
CLN8-204ENST00000519254 C1orf54Q8WWF1 131 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms